RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 TLX2O43763 284 aaPredicted RBP14.46□□□□□ -0.1
CCDC40-202ENST00000374876 GSTM3P21266 225 aa14.46□□□□□ -0.1
CCDC40-202ENST00000374876 CDH3P22223 829 aa14.46□□□□□ -0.1
CCDC40-202ENST00000374876 PCYT1AP49585 367 aa14.46□□□□□ -0.1
CCDC40-202ENST00000374876 RHAGQ02094 409 aa14.46□□□□□ -0.1
CCDC40-202ENST00000374876 ZNF91Q05481 1191 aa14.46□□□□□ -0.1
CCDC40-202ENST00000374876 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.46□□□□□ -0.1
CCDC40-202ENST00000374876 GINS1Q14691 196 aa14.46□□□□□ -0.1
CCDC40-202ENST00000374876 KIR2DS3Q14952 304 aa14.46□□□□□ -0.1
CCDC40-202ENST00000374876 TBC1D25Q3MII6 688 aa14.46□□□□□ -0.1
CCDC40-202ENST00000374876 WDR53Q7Z5U6 358 aaPredicted RBP14.46□□□□□ -0.1
CCDC40-202ENST00000374876 TRIM73Q86UV7 250 aa14.46□□□□□ -0.1
CCDC40-202ENST00000374876 TGM7Q96PF1 710 aa14.46□□□□□ -0.1
CCDC40-202ENST00000374876 DEPDC7Q96QD5 511 aa14.46□□□□□ -0.1
CCDC40-202ENST00000374876 POLDIP3Q9BY77 421 aaKnown RBP14.46□□□□□ -0.1
CCDC40-202ENST00000374876 TRIM45Q9H8W5 580 aaPredicted RBP14.46□□□□□ -0.1
CCDC40-202ENST00000374876 KIF26BQ2KJY2 2108 aa14.45□□□□□ -0.1
CCDC40-202ENST00000374876 DSCR3O14972 297 aa14.45□□□□□ -0.1
CCDC40-202ENST00000374876 MAGP20916 626 aa14.45□□□□□ -0.1
CCDC40-202ENST00000374876 CPN2P22792 545 aa14.45□□□□□ -0.1
CCDC40-202ENST00000374876 CD40LGP29965 261 aa14.45□□□□□ -0.1
CCDC40-202ENST00000374876 S100A5P33763 92 aa14.45□□□□□ -0.1
CCDC40-202ENST00000374876 IFNGR2P38484 337 aa14.45□□□□□ -0.1
CCDC40-202ENST00000374876 CAPZBP47756 277 aa14.45□□□□□ -0.1
CCDC40-202ENST00000374876 GIPRP48546 466 aa14.45□□□□□ -0.1
CCDC40-202ENST00000374876 LSM11P83369 360 aaKnown RBP eCLIP14.45□□□□□ -0.1
CCDC40-202ENST00000374876 TNFRSF17Q02223 184 aa14.45□□□□□ -0.1
CCDC40-202ENST00000374876 ZFP36L1Q07352 338 aaKnown RBP14.45□□□□□ -0.1
CCDC40-202ENST00000374876 ENTPD8Q5MY95 495 aa14.45□□□□□ -0.1
CCDC40-202ENST00000374876 WDR74Q6RFH5 385 aaPredicted RBP14.45□□□□□ -0.1
CCDC40-202ENST00000374876 C19orf48Q6RUI8 117 aa14.45□□□□□ -0.1
CCDC40-202ENST00000374876 BCDIN3DQ7Z5W3 292 aaKnown RBP14.45□□□□□ -0.1
CCDC40-202ENST00000374876 ATCAYQ86WG3 371 aa14.45□□□□□ -0.1
CCDC40-202ENST00000374876 VRK2Q86Y07 508 aa14.45□□□□□ -0.1
CCDC40-202ENST00000374876 SLITRK4Q8IW52 837 aa14.45□□□□□ -0.1
CCDC40-202ENST00000374876 LRRC25Q8N386 305 aaPredicted RBP14.45□□□□□ -0.1
CCDC40-202ENST00000374876 CLIP4Q8N3C7 705 aa14.45□□□□□ -0.1
CCDC40-202ENST00000374876 OR4D9Q8NGE8 314 aa14.45□□□□□ -0.1
CCDC40-202ENST00000374876 ZCCHC10Q8TBK6 192 aa14.45□□□□□ -0.1
CCDC40-202ENST00000374876 ADAMTS15Q8TE58 950 aa14.45□□□□□ -0.1
CCDC40-202ENST00000374876 NR4A3Q92570 626 aa14.45□□□□□ -0.1
CCDC40-202ENST00000374876 COL26A1Q96A83 441 aa14.45□□□□□ -0.1
CCDC40-202ENST00000374876 MND1Q9BWT6 205 aa14.45□□□□□ -0.1
CCDC40-202ENST00000374876 CDADC1Q9BWV3 514 aa14.45□□□□□ -0.1
CCDC40-202ENST00000374876 GIN1Q9NXP7 522 aa14.45□□□□□ -0.1
CCDC40-202ENST00000374876 PHF11Q9UIL8 331 aa14.45□□□□□ -0.1
CCDC40-202ENST00000374876 MDC1Q14676 2089 aaKnown RBP14.45□□□□□ -0.1
CCDC40-202ENST00000374876 OR5K3A6NET4 321 aa14.44□□□□□ -0.1
CCDC40-202ENST00000374876 AGAP5A6NIR3 686 aa14.44□□□□□ -0.1
CCDC40-202ENST00000374876 TAF4O00268 1085 aa14.44□□□□□ -0.1
CCDC40-202ENST00000374876 PRKYO43930 277 aa14.44□□□□□ -0.1
CCDC40-202ENST00000374876 KIAA0513O60268 411 aa14.44□□□□□ -0.1
CCDC40-202ENST00000374876 CYP7B1O75881 506 aa14.44□□□□□ -0.1
CCDC40-202ENST00000374876 SCG5P05408 212 aa14.44□□□□□ -0.1
CCDC40-202ENST00000374876 IFNA8P32881 189 aa14.44□□□□□ -0.1
CCDC40-202ENST00000374876 SOX6P35712 828 aa14.44□□□□□ -0.1
CCDC40-202ENST00000374876 SMSP52788 366 aa14.44□□□□□ -0.1
CCDC40-202ENST00000374876 RPS3AP61247 264 aaKnown RBP14.44□□□□□ -0.1
CCDC40-202ENST00000374876 FBXO42Q6P3S6 717 aa14.44□□□□□ -0.1
CCDC40-202ENST00000374876 TUBA3EQ6PEY2 450 aa14.44□□□□□ -0.1
CCDC40-202ENST00000374876 PLXDC1Q8IUK5 500 aa14.44□□□□□ -0.1
CCDC40-202ENST00000374876 SAMD14Q8IZD0 417 aaPredicted RBP14.44□□□□□ -0.1
CCDC40-202ENST00000374876 FAM26EQ8N5C1 309 aa14.44□□□□□ -0.1
CCDC40-202ENST00000374876 CCDC74BQ96LY2 380 aa14.44□□□□□ -0.1
CCDC40-202ENST00000374876 OPALINQ96PE5 141 aa14.44□□□□□ -0.1
CCDC40-202ENST00000374876 GPA33Q99795 319 aa14.44□□□□□ -0.1
CCDC40-202ENST00000374876 PRR14Q9BWN1 585 aa14.44□□□□□ -0.1
CCDC40-202ENST00000374876 TAPBPLQ9BX59 468 aa14.44□□□□□ -0.1
CCDC40-202ENST00000374876 NXF2Q9GZY0 626 aaKnown RBP14.44□□□□□ -0.1
CCDC40-202ENST00000374876 KLHL28Q9NXS3 571 aa14.44□□□□□ -0.1
CCDC40-202ENST00000374876 CLEC2DQ9UHP7 191 aa14.44□□□□□ -0.1
CCDC40-202ENST00000374876 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.44□□□□□ -0.1
CCDC40-202ENST00000374876 GSAPA4D1B5 854 aa14.44□□□□□ -0.1
CCDC40-202ENST00000374876 PMS2P1A4D2B8 440 aa14.44□□□□□ -0.1
CCDC40-202ENST00000374876 DUXAA6NLW8 204 aa14.44□□□□□ -0.1
CCDC40-202ENST00000374876 FRS3O43559 492 aa14.44□□□□□ -0.1
CCDC40-202ENST00000374876 CCNYL3P0C7X3 344 aa14.44□□□□□ -0.1
CCDC40-202ENST00000374876 TRAM2Q15035 370 aa14.44□□□□□ -0.1
CCDC40-202ENST00000374876 SPHARQ15513 63 aa14.44□□□□□ -0.1
CCDC40-202ENST00000374876 SSX1Q16384 188 aa14.44□□□□□ -0.1
CCDC40-202ENST00000374876 FAM214AQ32MH5 1076 aa14.44□□□□□ -0.1
CCDC40-202ENST00000374876 DEFB134Q4QY38 66 aa14.44□□□□□ -0.1
CCDC40-202ENST00000374876 OOSP2Q86WS3 158 aa14.44□□□□□ -0.1
CCDC40-202ENST00000374876 OR4K14Q8NGD5 310 aa14.44□□□□□ -0.1
CCDC40-202ENST00000374876 ZG16BQ96DA0 208 aa14.44□□□□□ -0.1
CCDC40-202ENST00000374876 GIMAP5Q96F15 307 aa14.44□□□□□ -0.1
CCDC40-202ENST00000374876 LRR1Q96L50 414 aa14.44□□□□□ -0.1
CCDC40-202ENST00000374876 C10orf90Q96M02 699 aa14.44□□□□□ -0.1
CCDC40-202ENST00000374876 MS4A4EQ96PG1 132 aa14.44□□□□□ -0.1
CCDC40-202ENST00000374876 OR2A14Q96R47 310 aa14.44□□□□□ -0.1
CCDC40-202ENST00000374876 SERINC2Q96SA4 455 aa14.44□□□□□ -0.1
CCDC40-202ENST00000374876 ARHGDIGQ99819 225 aa14.44□□□□□ -0.1
CCDC40-202ENST00000374876 RACGAP1Q9H0H5 632 aa14.44□□□□□ -0.1
CCDC40-202ENST00000374876 CFL2Q9Y281 166 aa14.44□□□□□ -0.1
CCDC40-202ENST00000374876 LSM2Q9Y333 95 aaKnown RBP14.44□□□□□ -0.1
CCDC40-202ENST00000374876 A0A087WUU8 490 aa14.43□□□□□ -0.1
CCDC40-202ENST00000374876 A0A1W2PNU3 283 aaPredicted RBP14.43□□□□□ -0.1
CCDC40-202ENST00000374876 URADA6NGE7 173 aa14.43□□□□□ -0.1
CCDC40-202ENST00000374876 CPSF4LA6NMK7 179 aaKnown RBP14.43□□□□□ -0.1
CCDC40-202ENST00000374876 BOLA2-SMG1P6H3BVE0 249 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms