RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 LAPTM4BQ86VI4 370 aa16.06■□□□□ 0.16
UBE3D-203ENST00000369747 PRSS58Q8IYP2 241 aa16.06■□□□□ 0.16
UBE3D-203ENST00000369747 DEPDC4Q8N2C3 294 aa16.06■□□□□ 0.16
UBE3D-203ENST00000369747 SLC16A11Q8NCK7 471 aa16.06■□□□□ 0.16
UBE3D-203ENST00000369747 GALNT6Q8NCL4 622 aa16.06■□□□□ 0.16
UBE3D-203ENST00000369747 RORBQ92753 470 aa16.06■□□□□ 0.16
UBE3D-203ENST00000369747 DDA1Q9BW61 102 aa16.06■□□□□ 0.16
UBE3D-203ENST00000369747 GPN2Q9H9Y4 310 aaPredicted RBP16.06■□□□□ 0.16
UBE3D-203ENST00000369747 MAN2C1Q9NTJ4 1040 aa16.06■□□□□ 0.16
UBE3D-203ENST00000369747 PSORS1C1Q9UIG5 152 aa16.06■□□□□ 0.16
UBE3D-203ENST00000369747 AHCTF1Q8WYP5 2266 aa16.05■□□□□ 0.16
UBE3D-203ENST00000369747 ZFHX4Q86UP3 3567 aa16.05■□□□□ 0.16
UBE3D-203ENST00000369747 A0A1W2PRQ8 180 aa16.05■□□□□ 0.16
UBE3D-203ENST00000369747 SH3PXD2BA1X283 911 aa16.05■□□□□ 0.16
UBE3D-203ENST00000369747 OR10H3O60404 316 aa16.05■□□□□ 0.16
UBE3D-203ENST00000369747 STK17BO94768 372 aa16.05■□□□□ 0.16
UBE3D-203ENST00000369747 TNFSF15O95150 251 aa16.05■□□□□ 0.16
UBE3D-203ENST00000369747 FADS2O95864 444 aaKnown RBP16.05■□□□□ 0.16
UBE3D-203ENST00000369747 PORP16435 677 aaPredicted RBP16.05■□□□□ 0.16
UBE3D-203ENST00000369747 MAOAP21397 527 aa16.05■□□□□ 0.16
UBE3D-203ENST00000369747 TEKQ02763 1124 aa16.05■□□□□ 0.16
UBE3D-203ENST00000369747 NFATC3Q12968 1075 aa16.05■□□□□ 0.16
UBE3D-203ENST00000369747 DGCR6Q14129 220 aa16.05■□□□□ 0.16
UBE3D-203ENST00000369747 ATAD3BQ5T9A4 648 aa16.05■□□□□ 0.16
UBE3D-203ENST00000369747 CDC73Q6P1J9 531 aa16.05■□□□□ 0.16
UBE3D-203ENST00000369747 PGBD2Q6P3X8 592 aa16.05■□□□□ 0.16
UBE3D-203ENST00000369747 SHISA6Q6ZSJ9 500 aa16.05■□□□□ 0.16
UBE3D-203ENST00000369747 C16orf62Q7Z3J2 963 aa16.05■□□□□ 0.16
UBE3D-203ENST00000369747 CACTIN-AS1Q8N1I8 211 aa16.05■□□□□ 0.16
UBE3D-203ENST00000369747 SVOPQ8N4V2 548 aa16.05■□□□□ 0.16
UBE3D-203ENST00000369747 ADAMTS15Q8TE58 950 aa16.05■□□□□ 0.16
UBE3D-203ENST00000369747 TANKQ92844 425 aa16.05■□□□□ 0.16
UBE3D-203ENST00000369747 ANKRD9Q96BM1 317 aaPredicted RBP16.05■□□□□ 0.16
UBE3D-203ENST00000369747 UCK2Q9BZX2 261 aa16.05■□□□□ 0.16
UBE3D-203ENST00000369747 ACOT13Q9NPJ3 140 aa16.05■□□□□ 0.16
UBE3D-203ENST00000369747 FKBP14Q9NWM8 211 aa16.05■□□□□ 0.16
UBE3D-203ENST00000369747 CALML5Q9NZT1 146 aa16.05■□□□□ 0.16
UBE3D-203ENST00000369747 PTGFRNQ9P2B2 879 aa16.05■□□□□ 0.16
UBE3D-203ENST00000369747 ENPP5Q9UJA9 477 aa16.05■□□□□ 0.16
UBE3D-203ENST00000369747 CLDN16Q9Y5I7 305 aa16.05■□□□□ 0.16
UBE3D-203ENST00000369747 SDK2Q58EX2 2172 aa16.04■□□□□ 0.16
UBE3D-203ENST00000369747 ALPPP05187 535 aa16.04■□□□□ 0.16
UBE3D-203ENST00000369747 MINDY4Q4G0A6 757 aa16.04■□□□□ 0.16
UBE3D-203ENST00000369747 ZNF628Q5EBL2 1059 aa16.04■□□□□ 0.16
UBE3D-203ENST00000369747 ZNF311Q5JNZ3 666 aa16.04■□□□□ 0.16
UBE3D-203ENST00000369747 SYT6Q5T7P8 510 aaPredicted RBP16.04■□□□□ 0.16
UBE3D-203ENST00000369747 FHL5Q5TD97 284 aa16.04■□□□□ 0.16
UBE3D-203ENST00000369747 PODNL1Q6PEZ8 512 aa16.04■□□□□ 0.16
UBE3D-203ENST00000369747 CCDC81Q6ZN84 652 aa16.04■□□□□ 0.16
UBE3D-203ENST00000369747 TMPRSS7Q7RTY8 843 aa16.04■□□□□ 0.16
UBE3D-203ENST00000369747 VRK2Q86Y07 508 aa16.04■□□□□ 0.16
UBE3D-203ENST00000369747 ANKRD13BQ86YJ7 626 aa16.04■□□□□ 0.16
UBE3D-203ENST00000369747 ZNF595Q8IYB9 648 aa16.04■□□□□ 0.16
UBE3D-203ENST00000369747 PRRC1Q96M27 445 aa16.04■□□□□ 0.16
UBE3D-203ENST00000369747 OR1F2PQ96R84 312 aa16.04■□□□□ 0.16
UBE3D-203ENST00000369747 ZPBPQ9BS86 351 aa16.04■□□□□ 0.16
UBE3D-203ENST00000369747 MKKSQ9NPJ1 570 aaPredicted RBP16.04■□□□□ 0.16
UBE3D-203ENST00000369747 MRPS33Q9Y291 106 aaKnown RBP16.04■□□□□ 0.16
UBE3D-203ENST00000369747 CHST2Q9Y4C5 530 aa16.04■□□□□ 0.16
UBE3D-203ENST00000369747 PCDHGA3Q9Y5H0 932 aa16.04■□□□□ 0.16
UBE3D-203ENST00000369747 CFAP47Q6ZTR5 3102 aa16.04■□□□□ 0.16
UBE3D-203ENST00000369747 DUXAA6NLW8 204 aa16.04■□□□□ 0.16
UBE3D-203ENST00000369747 SYT5O00445 386 aa16.04■□□□□ 0.16
UBE3D-203ENST00000369747 FCMRO60667 390 aa16.04■□□□□ 0.16
UBE3D-203ENST00000369747 CNOT3O75175 753 aaKnown RBP16.04■□□□□ 0.16
UBE3D-203ENST00000369747 GPR75O95800 540 aa16.04■□□□□ 0.16
UBE3D-203ENST00000369747 OSMP13725 252 aa16.04■□□□□ 0.16
UBE3D-203ENST00000369747 UGT2B15P54855 530 aa16.04■□□□□ 0.16
UBE3D-203ENST00000369747 CDC42P60953 191 aa16.04■□□□□ 0.16
UBE3D-203ENST00000369747 MVKQ03426 396 aa16.04■□□□□ 0.16
UBE3D-203ENST00000369747 TRMT12Q53H54 448 aaKnown RBP16.04■□□□□ 0.16
UBE3D-203ENST00000369747 MFSD4BQ5TF39 518 aa16.04■□□□□ 0.16
UBE3D-203ENST00000369747 STT3BQ8TCJ2 826 aa16.04■□□□□ 0.16
UBE3D-203ENST00000369747 ADAMTS18Q8TE60 1221 aa16.04■□□□□ 0.16
UBE3D-203ENST00000369747 GGHQ92820 318 aa16.04■□□□□ 0.16
UBE3D-203ENST00000369747 CDS1Q92903 461 aa16.04■□□□□ 0.16
UBE3D-203ENST00000369747 LRFN5Q96NI6 719 aa16.04■□□□□ 0.16
UBE3D-203ENST00000369747 ARHGDIGQ99819 225 aa16.04■□□□□ 0.16
UBE3D-203ENST00000369747 COPS4Q9BT78 406 aa16.04■□□□□ 0.16
UBE3D-203ENST00000369747 FNDC11Q9BVV2 318 aa16.04■□□□□ 0.16
UBE3D-203ENST00000369747 AMBNQ9NP70 447 aa16.04■□□□□ 0.16
UBE3D-203ENST00000369747 PRTFDC1Q9NRG1 225 aa16.04■□□□□ 0.16
UBE3D-203ENST00000369747 IMPAD1Q9NX62 359 aa16.04■□□□□ 0.16
UBE3D-203ENST00000369747 CLCA1A8K7I4 914 aa16.03■□□□□ 0.16
UBE3D-203ENST00000369747 CLDN4O14493 209 aa16.03■□□□□ 0.16
UBE3D-203ENST00000369747 TPST2O60704 377 aa16.03■□□□□ 0.16
UBE3D-203ENST00000369747 CTNSO60931 367 aa16.03■□□□□ 0.16
UBE3D-203ENST00000369747 ONECUT2O95948 504 aa16.03■□□□□ 0.16
UBE3D-203ENST00000369747 ATP1B1P05026 303 aa16.03■□□□□ 0.16
UBE3D-203ENST00000369747 KLK3P07288 261 aaPredicted RBP16.03■□□□□ 0.16
UBE3D-203ENST00000369747 IGFBP1P08833 259 aaPredicted RBP16.03■□□□□ 0.16
UBE3D-203ENST00000369747 NUDT6P53370 316 aa16.03■□□□□ 0.16
UBE3D-203ENST00000369747 GABREP78334 506 aa16.03■□□□□ 0.16
UBE3D-203ENST00000369747 TMEM164Q5U3C3 297 aa16.03■□□□□ 0.16
UBE3D-203ENST00000369747 FAM69BQ5VUD6 431 aa16.03■□□□□ 0.16
UBE3D-203ENST00000369747 ZNF517Q6ZMY9 492 aaPredicted RBP16.03■□□□□ 0.16
UBE3D-203ENST00000369747 FRRS1Q6ZNA5 592 aa16.03■□□□□ 0.16
UBE3D-203ENST00000369747 OVCH1Q7RTY7 1134 aa16.03■□□□□ 0.16
UBE3D-203ENST00000369747 TIPARPQ7Z3E1 657 aaKnown RBP16.03■□□□□ 0.16
UBE3D-203ENST00000369747 SLC9A6Q92581 669 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms