RNA–Protein interactions for RNA: ENST00000366813.1

H3F3A-201, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-201ENST00000366813 PSTKQ8IV42 348 aaKnown RBP6.4□□□□□ -1.39
H3F3A-201ENST00000366813 C7orf57Q8NEG2 295 aa6.4□□□□□ -1.39
H3F3A-201ENST00000366813 OR9A4Q8NGU2 314 aa6.4□□□□□ -1.39
H3F3A-201ENST00000366813 OR51Q1Q8NH59 317 aa6.4□□□□□ -1.39
H3F3A-201ENST00000366813 SPATA22Q8NHS9 363 aa6.4□□□□□ -1.39
H3F3A-201ENST00000366813 SNAPC3Q92966 411 aa6.4□□□□□ -1.39
H3F3A-201ENST00000366813 SLC22A18Q96BI1 424 aa6.4□□□□□ -1.39
H3F3A-201ENST00000366813 URB1-AS1Q96HZ7 61 aa6.4□□□□□ -1.39
H3F3A-201ENST00000366813 GSDMAQ96QA5 445 aa6.4□□□□□ -1.39
H3F3A-201ENST00000366813 H2AFJQ9BTM1 129 aa6.4□□□□□ -1.39
H3F3A-201ENST00000366813 MED18Q9BUE0 208 aa6.4□□□□□ -1.39
H3F3A-201ENST00000366813 RAB11FIP5Q9BXF6 653 aa6.4□□□□□ -1.39
H3F3A-201ENST00000366813 DEFB126Q9BYW3 111 aa6.4□□□□□ -1.39
H3F3A-201ENST00000366813 DRC3Q9H069 523 aa6.4□□□□□ -1.39
H3F3A-201ENST00000366813 IL1RL2Q9HB29 575 aa6.4□□□□□ -1.39
H3F3A-201ENST00000366813 KRCC1Q9NPI7 259 aaPredicted RBP6.4□□□□□ -1.39
H3F3A-201ENST00000366813 HAUS2Q9NVX0 235 aa6.4□□□□□ -1.39
H3F3A-201ENST00000366813 SCINQ9Y6U3 715 aa6.4□□□□□ -1.39
H3F3A-201ENST00000366813 EML6Q6ZMW3 1958 aa6.4□□□□□ -1.39
H3F3A-201ENST00000366813 TMEM89A2RUT3 159 aa6.39□□□□□ -1.39
H3F3A-201ENST00000366813 NPIPB11E5RHQ5 1161 aa6.39□□□□□ -1.39
H3F3A-201ENST00000366813 F8VZ95 297 aa6.39□□□□□ -1.39
H3F3A-201ENST00000366813 KIAA0513O60268 411 aa6.39□□□□□ -1.39
H3F3A-201ENST00000366813 HCN1O60741 890 aa6.39□□□□□ -1.39
H3F3A-201ENST00000366813 TMCC2O75069 709 aa6.39□□□□□ -1.39
H3F3A-201ENST00000366813 SEC14L2O76054 403 aa6.39□□□□□ -1.39
H3F3A-201ENST00000366813 SEC31AO94979 1220 aaKnown RBP6.39□□□□□ -1.39
H3F3A-201ENST00000366813 TFP02787 698 aa6.39□□□□□ -1.39
H3F3A-201ENST00000366813 CYC1P08574 325 aa6.39□□□□□ -1.39
H3F3A-201ENST00000366813 T-ENOLP0DO92 83 aa6.39□□□□□ -1.39
H3F3A-201ENST00000366813 RALBP11234 206 aa6.39□□□□□ -1.39
H3F3A-201ENST00000366813 DPP4P27487 766 aa6.39□□□□□ -1.39
H3F3A-201ENST00000366813 TRPC1P48995 793 aa6.39□□□□□ -1.39
H3F3A-201ENST00000366813 DNASE1L1P49184 302 aa6.39□□□□□ -1.39
H3F3A-201ENST00000366813 P2RX3P56373 397 aa6.39□□□□□ -1.39
H3F3A-201ENST00000366813 ZP1P60852 638 aa6.39□□□□□ -1.39
H3F3A-201ENST00000366813 PTK6Q13882 451 aa6.39□□□□□ -1.39
H3F3A-201ENST00000366813 CCDC122Q5T0U0 273 aa6.39□□□□□ -1.39
H3F3A-201ENST00000366813 CDC73Q6P1J9 531 aa6.39□□□□□ -1.39
H3F3A-201ENST00000366813 ZNF704Q6ZNC4 412 aaPredicted RBP6.39□□□□□ -1.39
H3F3A-201ENST00000366813 PRSS41Q7RTY9 318 aa6.39□□□□□ -1.39
H3F3A-201ENST00000366813 ZNF550Q7Z398 422 aa6.39□□□□□ -1.39
H3F3A-201ENST00000366813 CLDN19Q8N6F1 224 aa6.39□□□□□ -1.39
H3F3A-201ENST00000366813 ZNF611Q8N823 705 aa6.39□□□□□ -1.39
H3F3A-201ENST00000366813 GJC3Q8NFK1 279 aa6.39□□□□□ -1.39
H3F3A-201ENST00000366813 BLOC1S5Q8TDH9 187 aa6.39□□□□□ -1.39
H3F3A-201ENST00000366813 IMP4Q96G21 291 aaKnown RBP6.39□□□□□ -1.39
H3F3A-201ENST00000366813 TSGA13Q96PP4 275 aa6.39□□□□□ -1.39
H3F3A-201ENST00000366813 RHNO1Q9BSD3 238 aa6.39□□□□□ -1.39
H3F3A-201ENST00000366813 LIN28AQ9H9Z2 209 aaKnown RBP6.39□□□□□ -1.39
H3F3A-201ENST00000366813 EML4Q9HC35 981 aaKnown RBP6.39□□□□□ -1.39
H3F3A-201ENST00000366813 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.39□□□□□ -1.39
H3F3A-201ENST00000366813 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.39□□□□□ -1.39
H3F3A-201ENST00000366813 KCNS2Q9ULS6 477 aa6.39□□□□□ -1.39
H3F3A-201ENST00000366813 PCDHGB1Q9Y5G3 927 aa6.39□□□□□ -1.39
H3F3A-201ENST00000366813 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.39□□□□□ -1.39
H3F3A-201ENST00000366813 A3GALT2U3KPV4 340 aa6.39□□□□□ -1.39
H3F3A-201ENST00000366813 BICDL2A1A5D9 508 aa6.38□□□□□ -1.39
H3F3A-201ENST00000366813 A8MXE2 369 aa6.38□□□□□ -1.39
H3F3A-201ENST00000366813 PRR23D1E9PI22 279 aaPredicted RBP6.38□□□□□ -1.39
H3F3A-201ENST00000366813 HS3ST1O14792 307 aa6.38□□□□□ -1.39
H3F3A-201ENST00000366813 P2RX6O15547 441 aa6.38□□□□□ -1.39
H3F3A-201ENST00000366813 SSX4O60224 188 aa6.38□□□□□ -1.39
H3F3A-201ENST00000366813 SRP72O76094 671 aaKnown RBP6.38□□□□□ -1.39
H3F3A-201ENST00000366813 OR6B1O95007 311 aa6.38□□□□□ -1.39
H3F3A-201ENST00000366813 CCDC166P0CW27 439 aa6.38□□□□□ -1.39
H3F3A-201ENST00000366813 PRR23D2P0DMB1 279 aaPredicted RBP6.38□□□□□ -1.39
H3F3A-201ENST00000366813 HNF1AP20823 631 aa6.38□□□□□ -1.39
H3F3A-201ENST00000366813 CNR1P21554 472 aa6.38□□□□□ -1.39
H3F3A-201ENST00000366813 BSGP35613 385 aa6.38□□□□□ -1.39
H3F3A-201ENST00000366813 MTTPP55157 894 aa6.38□□□□□ -1.39
H3F3A-201ENST00000366813 LOXL1Q08397 574 aaPredicted RBP6.38□□□□□ -1.39
H3F3A-201ENST00000366813 MAMLD1Q13495 774 aa6.38□□□□□ -1.39
H3F3A-201ENST00000366813 GRB7Q14451 532 aa6.38□□□□□ -1.39
H3F3A-201ENST00000366813 ESCO2Q56NI9 601 aa6.38□□□□□ -1.39
H3F3A-201ENST00000366813 GARNL3Q5VVW2 1013 aa6.38□□□□□ -1.39
H3F3A-201ENST00000366813 NSUN5P2Q63ZY6 315 aa6.38□□□□□ -1.39
H3F3A-201ENST00000366813 LRRC8EQ6NSJ5 796 aa6.38□□□□□ -1.39
H3F3A-201ENST00000366813 GLT6D1Q7Z4J2 308 aa6.38□□□□□ -1.39
H3F3A-201ENST00000366813 PATL1Q86TB9 770 aaKnown RBP6.38□□□□□ -1.39
H3F3A-201ENST00000366813 SLC26A11Q86WA9 606 aa6.38□□□□□ -1.39
H3F3A-201ENST00000366813 CCNYQ8ND76 341 aa6.38□□□□□ -1.39
H3F3A-201ENST00000366813 PLPP5Q8NEB5 264 aa6.38□□□□□ -1.39
H3F3A-201ENST00000366813 OR2L3Q8NG85 312 aa6.38□□□□□ -1.39
H3F3A-201ENST00000366813 OR2L8Q8NGY9 312 aa6.38□□□□□ -1.39
H3F3A-201ENST00000366813 ANKRD9Q96BM1 317 aaPredicted RBP6.38□□□□□ -1.39
H3F3A-201ENST00000366813 TADA1Q96BN2 335 aa6.38□□□□□ -1.39
H3F3A-201ENST00000366813 FAF2Q96CS3 445 aa6.38□□□□□ -1.39
H3F3A-201ENST00000366813 QRFPRQ96P65 431 aa6.38□□□□□ -1.39
H3F3A-201ENST00000366813 BBS4Q96RK4 519 aa6.38□□□□□ -1.39
H3F3A-201ENST00000366813 COPS8Q99627 209 aa6.38□□□□□ -1.39
H3F3A-201ENST00000366813 FAM173AQ9BQD7 235 aa6.38□□□□□ -1.39
H3F3A-201ENST00000366813 TRABDQ9H4I3 376 aa6.38□□□□□ -1.39
H3F3A-201ENST00000366813 PLAC1Q9HBJ0 212 aa6.38□□□□□ -1.39
H3F3A-201ENST00000366813 HPF1Q9NWY4 346 aa6.38□□□□□ -1.39
H3F3A-201ENST00000366813 CRLS1Q9UJA2 301 aa6.38□□□□□ -1.39
H3F3A-201ENST00000366813 FBXW2Q9UKT8 454 aa6.38□□□□□ -1.39
H3F3A-201ENST00000366813 CFAP45Q9UL16 551 aa6.38□□□□□ -1.39
H3F3A-201ENST00000366813 LIPT1Q9Y234 373 aa6.38□□□□□ -1.39
H3F3A-201ENST00000366813 FAM96BQ9Y3D0 163 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms