RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 TRBV23-1A0A0A0MS06 115 aa10.5□□□□□ -0.73
CDC42BPA-205ENST00000366769 CSNK2A2P19784 350 aaPredicted RBP10.5□□□□□ -0.73
CDC42BPA-205ENST00000366769 CAMK2BQ13554 666 aa10.5□□□□□ -0.73
CDC42BPA-205ENST00000366769 PRR18Q8N4B5 295 aa10.5□□□□□ -0.73
CDC42BPA-205ENST00000366769 HORMAD2Q8N7B1 307 aa10.5□□□□□ -0.73
CDC42BPA-205ENST00000366769 DUSP19Q8WTR2 217 aa10.5□□□□□ -0.73
CDC42BPA-205ENST00000366769 SPRYD4Q8WW59 207 aaPredicted RBP10.5□□□□□ -0.73
CDC42BPA-205ENST00000366769 C22orf15Q8WYQ4 148 aa10.5□□□□□ -0.73
CDC42BPA-205ENST00000366769 CNN2Q99439 309 aaKnown RBP10.5□□□□□ -0.73
CDC42BPA-205ENST00000366769 EPHA6Q9UF33 1036 aa10.5□□□□□ -0.73
CDC42BPA-205ENST00000366769 STK17BO94768 372 aa10.49□□□□□ -0.73
CDC42BPA-205ENST00000366769 JMJD7P0C870 316 aa10.49□□□□□ -0.73
CDC42BPA-205ENST00000366769 GGT2P36268 569 aa10.49□□□□□ -0.73
CDC42BPA-205ENST00000366769 SLC25A11Q02978 314 aaKnown RBP10.49□□□□□ -0.73
CDC42BPA-205ENST00000366769 AQP6Q13520 282 aa10.49□□□□□ -0.73
CDC42BPA-205ENST00000366769 CEACAM20Q6UY09 585 aa10.49□□□□□ -0.73
CDC42BPA-205ENST00000366769 CLEC4CQ8WTT0 213 aa10.49□□□□□ -0.73
CDC42BPA-205ENST00000366769 TXN2Q99757 166 aa10.49□□□□□ -0.73
CDC42BPA-205ENST00000366769 DNAJC5Q9H3Z4 198 aa10.49□□□□□ -0.73
CDC42BPA-205ENST00000366769 FKBPLQ9UIM3 349 aa10.49□□□□□ -0.73
CDC42BPA-205ENST00000366769 OSGIN1Q9UJX0 560 aa10.49□□□□□ -0.73
CDC42BPA-205ENST00000366769 GGT3PA6NGU5 568 aa10.49□□□□□ -0.73
CDC42BPA-205ENST00000366769 CXCL11O14625 94 aa10.49□□□□□ -0.73
CDC42BPA-205ENST00000366769 CDC123O75794 336 aaPredicted RBP10.49□□□□□ -0.73
CDC42BPA-205ENST00000366769 HLA-DQB2P05538 268 aa10.49□□□□□ -0.73
CDC42BPA-205ENST00000366769 SMPD1P17405 629 aa10.49□□□□□ -0.73
CDC42BPA-205ENST00000366769 ATP4BP51164 291 aa10.49□□□□□ -0.73
CDC42BPA-205ENST00000366769 MARC2Q969Z3 335 aa10.49□□□□□ -0.73
CDC42BPA-205ENST00000366769 RBFOX1Q9NWB1 397 aaKnown RBP10.49□□□□□ -0.73
CDC42BPA-205ENST00000366769 A0A087X0M5 115 aa10.49□□□□□ -0.73
CDC42BPA-205ENST00000366769 A0A1B0GX30 115 aa10.49□□□□□ -0.73
CDC42BPA-205ENST00000366769 CDK2AP1O14519 115 aa10.49□□□□□ -0.73
CDC42BPA-205ENST00000366769 OR13C7P0DN81 318 aa10.49□□□□□ -0.73
CDC42BPA-205ENST00000366769 FUT2Q10981 343 aa10.49□□□□□ -0.73
CDC42BPA-205ENST00000366769 TMEM81Q6P7N7 255 aa10.49□□□□□ -0.73
CDC42BPA-205ENST00000366769 Q6ZPB1 254 aaPredicted RBP10.49□□□□□ -0.73
CDC42BPA-205ENST00000366769 KIAA0907Q7Z7F0 614 aaPredicted RBP10.49□□□□□ -0.73
CDC42BPA-205ENST00000366769 TMEM130Q8N3G9 435 aa10.49□□□□□ -0.73
CDC42BPA-205ENST00000366769 OR4C15Q8NGM1 316 aa10.49□□□□□ -0.73
CDC42BPA-205ENST00000366769 ANKRD36A6QL64 1941 aa10.49□□□□□ -0.73
CDC42BPA-205ENST00000366769 UNC119BA6NIH7 251 aa10.49□□□□□ -0.73
CDC42BPA-205ENST00000366769 SLC43A1O75387 559 aa10.49□□□□□ -0.73
CDC42BPA-205ENST00000366769 F10P00742 488 aa10.49□□□□□ -0.73
CDC42BPA-205ENST00000366769 SLC35E2BP0CK96 405 aa10.49□□□□□ -0.73
CDC42BPA-205ENST00000366769 RAB13P51153 203 aa10.49□□□□□ -0.73
CDC42BPA-205ENST00000366769 HTD2P86397 168 aa10.49□□□□□ -0.73
CDC42BPA-205ENST00000366769 COL19A1Q14993 1142 aa10.49□□□□□ -0.73
CDC42BPA-205ENST00000366769 NXNL2Q5VZ03 156 aa10.49□□□□□ -0.73
CDC42BPA-205ENST00000366769 TMEM102Q8N9M5 508 aaPredicted RBP10.49□□□□□ -0.73
CDC42BPA-205ENST00000366769 SLC2A9Q9NRM0 540 aa10.49□□□□□ -0.73
CDC42BPA-205ENST00000366769 UTS2RQ9UKP6 389 aa10.49□□□□□ -0.73
CDC42BPA-205ENST00000366769 PTHP01270 115 aa10.49□□□□□ -0.73
CDC42BPA-205ENST00000366769 TRIM46Q7Z4K8 759 aa10.49□□□□□ -0.73
CDC42BPA-205ENST00000366769 OR5D16Q8NGK9 328 aa10.49□□□□□ -0.73
CDC42BPA-205ENST00000366769 SGK3Q96BR1 496 aa10.49□□□□□ -0.73
CDC42BPA-205ENST00000366769 SARDHQ9UL12 918 aa10.49□□□□□ -0.73
CDC42BPA-205ENST00000366769 RASD1Q9Y272 281 aa10.49□□□□□ -0.73
CDC42BPA-205ENST00000366769 D6RAR5 112 aa10.49□□□□□ -0.73
CDC42BPA-205ENST00000366769 CTRB1P17538 263 aa10.49□□□□□ -0.73
CDC42BPA-205ENST00000366769 GSTM3P21266 225 aa10.49□□□□□ -0.73
CDC42BPA-205ENST00000366769 PREPP48147 710 aa10.49□□□□□ -0.73
CDC42BPA-205ENST00000366769 CTRB2Q6GPI1 263 aa10.49□□□□□ -0.73
CDC42BPA-205ENST00000366769 NIPAL3Q6P499 406 aa10.49□□□□□ -0.73
CDC42BPA-205ENST00000366769 TIFABQ6ZNK6 161 aa10.49□□□□□ -0.73
CDC42BPA-205ENST00000366769 NLGN4YQ8NFZ3 816 aaPredicted RBP10.49□□□□□ -0.73
CDC42BPA-205ENST00000366769 OR1M1Q8NGA1 313 aa10.49□□□□□ -0.73
CDC42BPA-205ENST00000366769 C20orf85Q9H1P6 137 aa10.49□□□□□ -0.73
CDC42BPA-205ENST00000366769 PTTG3PQ9NZH4 202 aa10.49□□□□□ -0.73
CDC42BPA-205ENST00000366769 AK6Q9Y3D8 172 aaKnown RBP10.49□□□□□ -0.73
CDC42BPA-205ENST00000366769 NACAE9PAV3 2078 aa10.49□□□□□ -0.73
CDC42BPA-205ENST00000366769 IL1AP01583 271 aa10.49□□□□□ -0.73
CDC42BPA-205ENST00000366769 EDN3P14138 238 aa10.49□□□□□ -0.73
CDC42BPA-205ENST00000366769 PFKLP17858 780 aa10.49□□□□□ -0.73
CDC42BPA-205ENST00000366769 RELL2Q8NC24 303 aaPredicted RBP10.49□□□□□ -0.73
CDC42BPA-205ENST00000366769 LMX1AQ8TE12 382 aa10.49□□□□□ -0.73
CDC42BPA-205ENST00000366769 LIPHQ8WWY8 451 aa10.49□□□□□ -0.73
CDC42BPA-205ENST00000366769 MYLIPQ8WY64 445 aa10.49□□□□□ -0.73
CDC42BPA-205ENST00000366769 NT5C3BQ969T7 300 aa10.49□□□□□ -0.73
CDC42BPA-205ENST00000366769 MIOXQ9UGB7 285 aa10.49□□□□□ -0.73
CDC42BPA-205ENST00000366769 GLOD5A6NK44 160 aa10.49□□□□□ -0.73
CDC42BPA-205ENST00000366769 UPK3BL1B0FP48 263 aa10.49□□□□□ -0.73
CDC42BPA-205ENST00000366769 UPK3BL2E5RIL1 263 aa10.49□□□□□ -0.73
CDC42BPA-205ENST00000366769 ARHGAP33O14559 1287 aa10.49□□□□□ -0.73
CDC42BPA-205ENST00000366769 GATCO43716 136 aaKnown RBP10.49□□□□□ -0.73
CDC42BPA-205ENST00000366769 C8orf89P0DMQ9 161 aa10.49□□□□□ -0.73
CDC42BPA-205ENST00000366769 PNLIPRP1P54315 467 aa10.49□□□□□ -0.73
CDC42BPA-205ENST00000366769 ZNF783Q6ZMS7 281 aa10.49□□□□□ -0.73
CDC42BPA-205ENST00000366769 RETREG3Q86VR2 466 aa10.49□□□□□ -0.73
CDC42BPA-205ENST00000366769 FBXO22Q8NEZ5 403 aa10.49□□□□□ -0.73
CDC42BPA-205ENST00000366769 PROKR1Q8TCW9 393 aa10.49□□□□□ -0.73
CDC42BPA-205ENST00000366769 MR1Q95460 341 aa10.49□□□□□ -0.73
CDC42BPA-205ENST00000366769 PEBP4Q96S96 227 aa10.49□□□□□ -0.73
CDC42BPA-205ENST00000366769 LUZP4Q9P127 313 aa10.49□□□□□ -0.73
CDC42BPA-205ENST00000366769 NPC1O15118 1278 aa10.48□□□□□ -0.73
CDC42BPA-205ENST00000366769 KCNK2O95069 426 aa10.48□□□□□ -0.73
CDC42BPA-205ENST00000366769 BCHEP06276 602 aa10.48□□□□□ -0.73
CDC42BPA-205ENST00000366769 ACTR1BP42025 376 aa10.48□□□□□ -0.73
CDC42BPA-205ENST00000366769 CDK3Q00526 305 aa10.48□□□□□ -0.73
CDC42BPA-205ENST00000366769 TAP2Q03519 686 aa10.48□□□□□ -0.73
CDC42BPA-205ENST00000366769 TLE3Q04726 772 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms