RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 DPYSL3Q14195 570 aa2.92□□□□□ -1.94
RNU6-28P-201ENST00000362378 SYPL1Q16563 259 aa2.92□□□□□ -1.94
RNU6-28P-201ENST00000362378 CEP55Q53EZ4 464 aa2.92□□□□□ -1.94
RNU6-28P-201ENST00000362378 FAM120AOSQ5T036 256 aa2.92□□□□□ -1.94
RNU6-28P-201ENST00000362378 MEDAGQ5VYS4 303 aa2.92□□□□□ -1.94
RNU6-28P-201ENST00000362378 TTC23Q5W5X9 447 aa2.92□□□□□ -1.94
RNU6-28P-201ENST00000362378 ZNF57Q68EA5 555 aaPredicted RBP2.92□□□□□ -1.94
RNU6-28P-201ENST00000362378 SCYL2Q6P3W7 929 aa2.92□□□□□ -1.94
RNU6-28P-201ENST00000362378 HIPK1Q86Z02 1210 aa2.92□□□□□ -1.94
RNU6-28P-201ENST00000362378 POM121L12Q8N7R1 296 aa2.92□□□□□ -1.94
RNU6-28P-201ENST00000362378 ANKFN1Q8N957 763 aa2.92□□□□□ -1.94
RNU6-28P-201ENST00000362378 ZNF671Q8TAW3 534 aa2.92□□□□□ -1.94
RNU6-28P-201ENST00000362378 M1APQ8TC57 530 aa2.92□□□□□ -1.94
RNU6-28P-201ENST00000362378 TFB1MQ8WVM0 346 aaKnown RBP2.92□□□□□ -1.94
RNU6-28P-201ENST00000362378 FAM3CQ92520 227 aa2.92□□□□□ -1.94
RNU6-28P-201ENST00000362378 EMG1Q92979 244 aaKnown RBP2.92□□□□□ -1.94
RNU6-28P-201ENST00000362378 ZBED6CLQ96FA7 236 aaPredicted RBP2.92□□□□□ -1.94
RNU6-28P-201ENST00000362378 ELOVL3Q9HB03 270 aa2.92□□□□□ -1.94
RNU6-28P-201ENST00000362378 TIGARQ9NQ88 270 aa2.92□□□□□ -1.94
RNU6-28P-201ENST00000362378 SMPD3Q9NY59 655 aaPredicted RBP2.92□□□□□ -1.94
RNU6-28P-201ENST00000362378 DHRS4-AS1Q9P1J3 65 aa2.92□□□□□ -1.94
RNU6-28P-201ENST00000362378 ARMCX1Q9P291 453 aa2.92□□□□□ -1.94
RNU6-28P-201ENST00000362378 GNG12Q9UBI6 72 aa2.92□□□□□ -1.94
RNU6-28P-201ENST00000362378 RNF14Q9UBS8 474 aa2.92□□□□□ -1.94
RNU6-28P-201ENST00000362378 XPO7Q9UIA9 1087 aaKnown RBP2.92□□□□□ -1.94
RNU6-28P-201ENST00000362378 WDR45Q9Y484 360 aa2.92□□□□□ -1.94
RNU6-28P-201ENST00000362378 PTCH1Q13635 1447 aa2.92□□□□□ -1.94
RNU6-28P-201ENST00000362378 SYNJ2BP-COX16A0A087WUM0 186 aa2.91□□□□□ -1.94
RNU6-28P-201ENST00000362378 G3V3Y1 287 aa2.91□□□□□ -1.94
RNU6-28P-201ENST00000362378 SAP18O00422 153 aaKnown RBP2.91□□□□□ -1.94
RNU6-28P-201ENST00000362378 BTN3A3O00478 584 aa2.91□□□□□ -1.94
RNU6-28P-201ENST00000362378 RIPK2O43353 540 aa2.91□□□□□ -1.94
RNU6-28P-201ENST00000362378 SRPX2O60687 465 aaPredicted RBP2.91□□□□□ -1.94
RNU6-28P-201ENST00000362378 ZNF253O75346 499 aa2.91□□□□□ -1.94
RNU6-28P-201ENST00000362378 ALPIP09923 528 aa2.91□□□□□ -1.94
RNU6-28P-201ENST00000362378 LAMP1P11279 417 aa2.91□□□□□ -1.94
RNU6-28P-201ENST00000362378 HNF1AP20823 631 aa2.91□□□□□ -1.94
RNU6-28P-201ENST00000362378 ATP5A1P25705 553 aaKnown RBP2.91□□□□□ -1.94
RNU6-28P-201ENST00000362378 HMGCLP35914 325 aa2.91□□□□□ -1.94
RNU6-28P-201ENST00000362378 BDKRB1P46663 353 aa2.91□□□□□ -1.94
RNU6-28P-201ENST00000362378 EWSR1Q01844 656 aaKnown RBP eCLIP2.91□□□□□ -1.94
RNU6-28P-201ENST00000362378 ZFP36L1Q07352 338 aaKnown RBP2.91□□□□□ -1.94
RNU6-28P-201ENST00000362378 RGS1Q08116 209 aa2.91□□□□□ -1.94
RNU6-28P-201ENST00000362378 PUDPQ08623 228 aa2.91□□□□□ -1.94
RNU6-28P-201ENST00000362378 RIPPLY1Q0D2K3 151 aa2.91□□□□□ -1.94
RNU6-28P-201ENST00000362378 COX10Q12887 443 aa2.91□□□□□ -1.94
RNU6-28P-201ENST00000362378 ZNF154Q13106 437 aa2.91□□□□□ -1.94
RNU6-28P-201ENST00000362378 ZNF772Q68DY9 489 aaPredicted RBP2.91□□□□□ -1.94
RNU6-28P-201ENST00000362378 PVRIGQ6DKI7 326 aa2.91□□□□□ -1.94
RNU6-28P-201ENST00000362378 CENPPQ6IPU0 288 aa2.91□□□□□ -1.94
RNU6-28P-201ENST00000362378 FAM71F2Q6NXP2 309 aa2.91□□□□□ -1.94
RNU6-28P-201ENST00000362378 ZNF683Q8IZ20 524 aa2.91□□□□□ -1.94
RNU6-28P-201ENST00000362378 LRRC43Q8N309 656 aa2.91□□□□□ -1.94
RNU6-28P-201ENST00000362378 ZCCHC7Q8N3Z6 543 aaKnown RBP2.91□□□□□ -1.94
RNU6-28P-201ENST00000362378 CLDN19Q8N6F1 224 aa2.91□□□□□ -1.94
RNU6-28P-201ENST00000362378 SYT14Q8NB59 555 aa2.91□□□□□ -1.94
RNU6-28P-201ENST00000362378 TRMT10AQ8TBZ6 339 aaKnown RBP2.91□□□□□ -1.94
RNU6-28P-201ENST00000362378 ADAMTS16Q8TE57 1224 aa2.91□□□□□ -1.94
RNU6-28P-201ENST00000362378 IL1F10Q8WWZ1 152 aa2.91□□□□□ -1.94
RNU6-28P-201ENST00000362378 CTNNBL1Q8WYA6 563 aaPredicted RBP2.91□□□□□ -1.94
RNU6-28P-201ENST00000362378 RPL3LQ92901 407 aaKnown RBP2.91□□□□□ -1.94
RNU6-28P-201ENST00000362378 SDSLQ96GA7 329 aa2.91□□□□□ -1.94
RNU6-28P-201ENST00000362378 C1orf147Q96MC9 270 aaPredicted RBP2.91□□□□□ -1.94
RNU6-28P-201ENST00000362378 MCCC1Q96RQ3 725 aaPredicted RBP2.91□□□□□ -1.94
RNU6-28P-201ENST00000362378 ATOH8Q96SQ7 321 aa2.91□□□□□ -1.94
RNU6-28P-201ENST00000362378 TM2D1Q9BX74 207 aa2.91□□□□□ -1.94
RNU6-28P-201ENST00000362378 DUSP16Q9BY84 665 aa2.91□□□□□ -1.94
RNU6-28P-201ENST00000362378 C6orf203Q9P0P8 240 aaPredicted RBP2.91□□□□□ -1.94
RNU6-28P-201ENST00000362378 PRODH2Q9UF12 536 aa2.91□□□□□ -1.94
RNU6-28P-201ENST00000362378 TRAV9-2A0A087WT02 112 aa2.9□□□□□ -1.95
RNU6-28P-201ENST00000362378 SRRM5B3KS81 715 aa2.9□□□□□ -1.95
RNU6-28P-201ENST00000362378 E9PAM4 449 aa2.9□□□□□ -1.95
RNU6-28P-201ENST00000362378 NPIPA7E9PJI5 369 aa2.9□□□□□ -1.95
RNU6-28P-201ENST00000362378 CXCL11O14625 94 aa2.9□□□□□ -1.95
RNU6-28P-201ENST00000362378 MTX2O75431 263 aa2.9□□□□□ -1.95
RNU6-28P-201ENST00000362378 SLC2A10O95528 541 aa2.9□□□□□ -1.95
RNU6-28P-201ENST00000362378 F10P00742 488 aa2.9□□□□□ -1.95
RNU6-28P-201ENST00000362378 OPN1MWP04001 364 aa2.9□□□□□ -1.95
RNU6-28P-201ENST00000362378 NPIPA8P0DM63 369 aa2.9□□□□□ -1.95
RNU6-28P-201ENST00000362378 OPN1MW2P0DN77 364 aa2.9□□□□□ -1.95
RNU6-28P-201ENST00000362378 OPN1MW3P0DN78 364 aa2.9□□□□□ -1.95
RNU6-28P-201ENST00000362378 BCL3P20749 454 aa2.9□□□□□ -1.95
RNU6-28P-201ENST00000362378 IDSP22304 550 aa2.9□□□□□ -1.95
RNU6-28P-201ENST00000362378 ACVR1BP36896 505 aa2.9□□□□□ -1.95
RNU6-28P-201ENST00000362378 GNPDA1P46926 289 aa2.9□□□□□ -1.95
RNU6-28P-201ENST00000362378 KRTAP10-6P60371 365 aaPredicted RBP2.9□□□□□ -1.95
RNU6-28P-201ENST00000362378 ERVPABLB-1P60509 514 aa2.9□□□□□ -1.95
RNU6-28P-201ENST00000362378 UBE2HP62256 183 aa2.9□□□□□ -1.95
RNU6-28P-201ENST00000362378 PEX6Q13608 980 aa2.9□□□□□ -1.95
RNU6-28P-201ENST00000362378 MESDQ14696 234 aa2.9□□□□□ -1.95
RNU6-28P-201ENST00000362378 GGTA1PQ4G0N0 100 aa2.9□□□□□ -1.95
RNU6-28P-201ENST00000362378 TEX44Q53QW1 395 aa2.9□□□□□ -1.95
RNU6-28P-201ENST00000362378 OR8G2PQ6IF36 304 aa2.9□□□□□ -1.95
RNU6-28P-201ENST00000362378 ACSM5Q6NUN0 579 aa2.9□□□□□ -1.95
RNU6-28P-201ENST00000362378 FAHD2BQ6P2I3 314 aaPredicted RBP2.9□□□□□ -1.95
RNU6-28P-201ENST00000362378 GCNT7Q6ZNI0 430 aa2.9□□□□□ -1.95
RNU6-28P-201ENST00000362378 SERPINA9Q86WD7 417 aa2.9□□□□□ -1.95
RNU6-28P-201ENST00000362378 C15orf54Q8N8G6 183 aa2.9□□□□□ -1.95
RNU6-28P-201ENST00000362378 OR9A4Q8NGU2 314 aa2.9□□□□□ -1.95
RNU6-28P-201ENST00000362378 CNIH3Q8TBE1 160 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms