RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 WASP42768 502 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 NRG3P56975 720 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 RHAGQ02094 409 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 ZNF45Q02386 682 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 ENPP2Q13822 863 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 NCF4Q15080 339 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 PDGFRLQ15198 375 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 TSTQ16762 297 aaKnown RBP6.82□□□□□ -1.32
CLCN3-202ENST00000360642 SPDYE7PQ495Y7 208 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 TPRG1LQ5T0D9 272 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 NDUFAF5Q5TEU4 345 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 MEDAGQ5VYS4 303 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 ZC3H14Q6PJT7 736 aaKnown RBP6.82□□□□□ -1.32
CLCN3-202ENST00000360642 SLC22A16Q86VW1 577 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 SLC7A13Q8TCU3 470 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 FGF11Q92914 225 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 OPALINQ96PE5 141 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 OR51I1Q9H343 314 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 SP140LQ9H930 580 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 BCL2L10Q9HD36 194 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 LANCL2Q9NS86 450 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 FBXO34Q9NWN3 711 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 ZSCAN32Q9NX65 697 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 P2RX2Q9UBL9 471 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 SEC14L3Q9UDX4 400 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 MKLN1Q9UL63 735 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 SLC5A6Q9Y289 635 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 CCDC88CQ9P219 2028 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 CCRL2O00421 344 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 MID1O15344 667 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 SLC28A2O43868 658 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 PRICKLE3O43900 615 aaPredicted RBP6.82□□□□□ -1.32
CLCN3-202ENST00000360642 OR10H3O60404 316 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 HSMCR30P0CW71 290 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 POU1F1P28069 291 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 MAGEA8P43361 318 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 EFNB1P98172 346 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 CD300CQ08708 224 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 CBX3Q13185 183 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 TP53BP2Q13625 1128 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 MED22Q15528 200 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 TMEM35AQ53FP2 167 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 SLC25A30Q5SVS4 291 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 CYP4Z2PQ8N1L4 340 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 PARP16Q8N5Y8 322 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 OR5D16Q8NGK9 328 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 ITFG2Q969R8 447 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 MSLNLQ96KJ4 702 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 Q96MT0 163 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 CAMK1GQ96NX5 476 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 TRNT1Q96Q11 434 aaKnown RBP6.82□□□□□ -1.32
CLCN3-202ENST00000360642 IL4I1Q96RQ9 567 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 C6orf62Q9GZU0 229 aaPredicted RBP6.82□□□□□ -1.32
CLCN3-202ENST00000360642 RSPH9Q9H1X1 276 aaPredicted RBP6.82□□□□□ -1.32
CLCN3-202ENST00000360642 KLHL31Q9H511 634 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 MVB12BQ9H7P6 319 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 HHATLQ9HCP6 504 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 SLC35C2Q9NQQ7 365 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 POLE4Q9NR33 117 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 MAN2C1Q9NTJ4 1040 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 OR1A2Q9Y585 309 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 C2orf16Q68DN1 1984 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 WASHC1A8K0Z3 465 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 C4orf51C9J302 202 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 KIAA0513O60268 411 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 GPX5O75715 221 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 ACTL6BO94805 426 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 MYOGP15173 224 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 PKLRP30613 574 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 CSTF2P33240 577 aaKnown RBP eCLIP6.82□□□□□ -1.32
CLCN3-202ENST00000360642 FEN1P39748 380 aaKnown RBP6.82□□□□□ -1.32
CLCN3-202ENST00000360642 RAB28P51157 221 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 XKP51811 444 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 SMIM11AP58511 58 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 FUT5Q11128 374 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 IRF4Q15306 451 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 TIMM50Q3ZCQ8 353 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 PSRC1Q6PGN9 363 aaPredicted RBP6.82□□□□□ -1.32
CLCN3-202ENST00000360642 WASH2PQ6VEQ5 465 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.82□□□□□ -1.32
CLCN3-202ENST00000360642 TMEM64Q6YI46 380 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 DEF8Q6ZN54 512 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 TTLQ8NG68 377 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 OR2L8Q8NGY9 312 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 WDR36Q8NI36 951 aaKnown RBP6.82□□□□□ -1.32
CLCN3-202ENST00000360642 VANGL1Q8TAA9 524 aaPredicted RBP6.82□□□□□ -1.32
CLCN3-202ENST00000360642 SLC35G5Q96KT7 338 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 C17orf62Q9BQA9 187 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 POLR2J3Q9H1A7 115 aaKnown RBP6.82□□□□□ -1.32
CLCN3-202ENST00000360642 WDR26Q9H7D7 661 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 CPNE5Q9HCH3 593 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 SERGEFQ9UGK8 458 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 ZFR2Q9UPR6 939 aaKnown RBP6.82□□□□□ -1.32
CLCN3-202ENST00000360642 ASB4Q9Y574 426 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 B4E171 279 aa6.81□□□□□ -1.32
CLCN3-202ENST00000360642 SOX14O95416 240 aa6.81□□□□□ -1.32
CLCN3-202ENST00000360642 LGI1O95970 557 aa6.81□□□□□ -1.32
CLCN3-202ENST00000360642 GRPP07492 148 aa6.81□□□□□ -1.32
CLCN3-202ENST00000360642 GLULP15104 373 aa6.81□□□□□ -1.32
CLCN3-202ENST00000360642 TSPAN7P41732 249 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms