RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 NANOGP1Q8N7R0 232 aa16.98■□□□□ 0.31
PDLIM7-203ENST00000359895 POGLUT1Q8NBL1 392 aa16.98■□□□□ 0.31
PDLIM7-203ENST00000359895 OR8D4Q8NGM9 314 aa16.98■□□□□ 0.31
PDLIM7-203ENST00000359895 OR6Q1Q8NGQ2 317 aa16.98■□□□□ 0.31
PDLIM7-203ENST00000359895 C1orf216Q8TAB5 229 aa16.98■□□□□ 0.31
PDLIM7-203ENST00000359895 AKIP1Q9NQ31 210 aa16.98■□□□□ 0.31
PDLIM7-203ENST00000359895 KCNE5Q9UJ90 142 aa16.98■□□□□ 0.31
PDLIM7-203ENST00000359895 CDH10Q9Y6N8 788 aa16.98■□□□□ 0.31
PDLIM7-203ENST00000359895 A3GALT2U3KPV4 340 aa16.98■□□□□ 0.31
PDLIM7-203ENST00000359895 KDM4EB2RXH2 506 aaPredicted RBP16.97■□□□□ 0.31
PDLIM7-203ENST00000359895 ZNF749O43361 778 aa16.97■□□□□ 0.31
PDLIM7-203ENST00000359895 PRAMEF2O60811 474 aa16.97■□□□□ 0.31
PDLIM7-203ENST00000359895 ZNF12P17014 697 aa16.97■□□□□ 0.31
PDLIM7-203ENST00000359895 DRD5P21918 477 aa16.97■□□□□ 0.31
PDLIM7-203ENST00000359895 GALNSP34059 522 aa16.97■□□□□ 0.31
PDLIM7-203ENST00000359895 FNTBP49356 437 aa16.97■□□□□ 0.31
PDLIM7-203ENST00000359895 EMDP50402 254 aa16.97■□□□□ 0.31
PDLIM7-203ENST00000359895 RAB40BQ12829 278 aa16.97■□□□□ 0.31
PDLIM7-203ENST00000359895 GRM7Q14831 915 aa16.97■□□□□ 0.31
PDLIM7-203ENST00000359895 SPHARQ15513 63 aa16.97■□□□□ 0.31
PDLIM7-203ENST00000359895 MINDY4Q4G0A6 757 aa16.97■□□□□ 0.31
PDLIM7-203ENST00000359895 ZNF613Q6PF04 617 aa16.97■□□□□ 0.31
PDLIM7-203ENST00000359895 ZNF620Q6ZNG0 422 aa16.97■□□□□ 0.31
PDLIM7-203ENST00000359895 GRAMD2AQ8IUY3 354 aa16.97■□□□□ 0.31
PDLIM7-203ENST00000359895 SIX5Q8N196 739 aa16.97■□□□□ 0.31
PDLIM7-203ENST00000359895 TMCO5AQ8N6Q1 288 aa16.97■□□□□ 0.31
PDLIM7-203ENST00000359895 AMER2Q8N7J2 671 aa16.97■□□□□ 0.31
PDLIM7-203ENST00000359895 MMABQ96EY8 250 aaPredicted RBP16.97■□□□□ 0.31
PDLIM7-203ENST00000359895 DACH2Q96NX9 599 aa16.97■□□□□ 0.31
PDLIM7-203ENST00000359895 PRSS27Q9BQR3 290 aa16.97■□□□□ 0.31
PDLIM7-203ENST00000359895 TAPBPLQ9BX59 468 aa16.97■□□□□ 0.31
PDLIM7-203ENST00000359895 RBCK1Q9BYM8 510 aa16.97■□□□□ 0.31
PDLIM7-203ENST00000359895 SLIRPQ9GZT3 109 aaKnown RBP16.97■□□□□ 0.31
PDLIM7-203ENST00000359895 MMP27Q9H306 513 aa16.97■□□□□ 0.31
PDLIM7-203ENST00000359895 CCDC59Q9P031 241 aaKnown RBP16.97■□□□□ 0.31
PDLIM7-203ENST00000359895 TMEM5Q9Y2B1 443 aa16.97■□□□□ 0.31
PDLIM7-203ENST00000359895 MYL12BO14950 172 aa16.96■□□□□ 0.31
PDLIM7-203ENST00000359895 CSO75390 466 aaKnown RBP16.96■□□□□ 0.31
PDLIM7-203ENST00000359895 PIAS2O75928 621 aa16.96■□□□□ 0.31
PDLIM7-203ENST00000359895 HMGN1P05114 100 aa16.96■□□□□ 0.31
PDLIM7-203ENST00000359895 GNSP15586 552 aa16.96■□□□□ 0.31
PDLIM7-203ENST00000359895 HTR2AP28223 471 aa16.96■□□□□ 0.31
PDLIM7-203ENST00000359895 GPR4P46093 362 aa16.96■□□□□ 0.31
PDLIM7-203ENST00000359895 LIMK1P53667 647 aa16.96■□□□□ 0.31
PDLIM7-203ENST00000359895 PSMD4P55036 377 aaKnown RBP16.96■□□□□ 0.31
PDLIM7-203ENST00000359895 GFERP55789 205 aa16.96■□□□□ 0.31
PDLIM7-203ENST00000359895 PSG6Q00889 435 aa16.96■□□□□ 0.31
PDLIM7-203ENST00000359895 COL9A2Q14055 689 aaPredicted RBP16.96■□□□□ 0.31
PDLIM7-203ENST00000359895 SERTAD2Q14140 314 aa16.96■□□□□ 0.31
PDLIM7-203ENST00000359895 C3orf38Q5JPI3 329 aa16.96■□□□□ 0.31
PDLIM7-203ENST00000359895 MEX3DQ86XN8 651 aaKnown RBP16.96■□□□□ 0.31
PDLIM7-203ENST00000359895 OR52I1Q8NGK6 324 aa16.96■□□□□ 0.31
PDLIM7-203ENST00000359895 MCFD2Q8NI22 146 aa16.96■□□□□ 0.31
PDLIM7-203ENST00000359895 DNASE2BQ8WZ79 361 aa16.96■□□□□ 0.31
PDLIM7-203ENST00000359895 RFKQ969G6 155 aa16.96■□□□□ 0.31
PDLIM7-203ENST00000359895 SLC35B4Q969S0 331 aa16.96■□□□□ 0.31
PDLIM7-203ENST00000359895 CLDN23Q96B33 292 aa16.96■□□□□ 0.31
PDLIM7-203ENST00000359895 HSPBAP1Q96EW2 488 aa16.96■□□□□ 0.31
PDLIM7-203ENST00000359895 HS6ST2Q96MM7 605 aa16.96■□□□□ 0.31
PDLIM7-203ENST00000359895 COL25A1Q9BXS0 654 aaPredicted RBP16.96■□□□□ 0.31
PDLIM7-203ENST00000359895 TMEM27Q9HBJ8 222 aa16.96■□□□□ 0.31
PDLIM7-203ENST00000359895 FGF20Q9NP95 211 aaPredicted RBP16.96■□□□□ 0.31
PDLIM7-203ENST00000359895 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.96■□□□□ 0.31
PDLIM7-203ENST00000359895 PMF1-BGLAPU3KQ54 211 aa16.96■□□□□ 0.31
PDLIM7-203ENST00000359895 NPIPA5A0A0B4J1W7 369 aa16.95■□□□□ 0.3
PDLIM7-203ENST00000359895 IGHV5-51A0A0C4DH38 117 aa16.95■□□□□ 0.3
PDLIM7-203ENST00000359895 UNC119BA6NIH7 251 aa16.95■□□□□ 0.3
PDLIM7-203ENST00000359895 NPIPA7E9PJI5 369 aa16.95■□□□□ 0.3
PDLIM7-203ENST00000359895 TGFBR3LH3BV60 316 aa16.95■□□□□ 0.3
PDLIM7-203ENST00000359895 ARHGAP33O14559 1287 aa16.95■□□□□ 0.3
PDLIM7-203ENST00000359895 PIP5K1CO60331 668 aa16.95■□□□□ 0.3
PDLIM7-203ENST00000359895 GKN3PP0CG01 181 aa16.95■□□□□ 0.3
PDLIM7-203ENST00000359895 NPIPA8P0DM63 369 aa16.95■□□□□ 0.3
PDLIM7-203ENST00000359895 PRG2P13727 222 aa16.95■□□□□ 0.3
PDLIM7-203ENST00000359895 ENDOUP21128 410 aaKnown RBP16.95■□□□□ 0.3
PDLIM7-203ENST00000359895 GRK5P34947 590 aa16.95■□□□□ 0.3
PDLIM7-203ENST00000359895 MAT1AQ00266 395 aaKnown RBP16.95■□□□□ 0.3
PDLIM7-203ENST00000359895 PRKCDQ05655 676 aa16.95■□□□□ 0.3
PDLIM7-203ENST00000359895 PGGHGQ32M88 737 aa16.95■□□□□ 0.3
PDLIM7-203ENST00000359895 RPL13AP3Q6NVV1 102 aa16.95■□□□□ 0.3
PDLIM7-203ENST00000359895 GDPGP1Q6ZNW5 385 aa16.95■□□□□ 0.3
PDLIM7-203ENST00000359895 BCDIN3DQ7Z5W3 292 aaKnown RBP16.95■□□□□ 0.3
PDLIM7-203ENST00000359895 CDK20Q8IZL9 346 aa16.95■□□□□ 0.3
PDLIM7-203ENST00000359895 ANKK1Q8NFD2 765 aa16.95■□□□□ 0.3
PDLIM7-203ENST00000359895 OR9Q1Q8NGQ5 310 aa16.95■□□□□ 0.3
PDLIM7-203ENST00000359895 BRIX1Q8TDN6 353 aaKnown RBP16.95■□□□□ 0.3
PDLIM7-203ENST00000359895 TMEM239Q8WW34 195 aa16.95■□□□□ 0.3
PDLIM7-203ENST00000359895 AHCYL2Q96HN2 611 aaKnown RBP16.95■□□□□ 0.3
PDLIM7-203ENST00000359895 VSTM2LQ96N03 204 aa16.95■□□□□ 0.3
PDLIM7-203ENST00000359895 OPALINQ96PE5 141 aa16.95■□□□□ 0.3
PDLIM7-203ENST00000359895 G6PC3Q9BUM1 346 aa16.95■□□□□ 0.3
PDLIM7-203ENST00000359895 OR51E2Q9H255 320 aa16.95■□□□□ 0.3
PDLIM7-203ENST00000359895 ZBTB20Q9HC78 741 aaPredicted RBP16.95■□□□□ 0.3
PDLIM7-203ENST00000359895 Q9N2J8 555 aa16.95■□□□□ 0.3
PDLIM7-203ENST00000359895 CHCHD3Q9NX63 227 aaKnown RBP16.95■□□□□ 0.3
PDLIM7-203ENST00000359895 ZNF223Q9UK11 482 aaPredicted RBP16.95■□□□□ 0.3
PDLIM7-203ENST00000359895 PCDH15Q96QU1 1955 aa16.95■□□□□ 0.3
PDLIM7-203ENST00000359895 LOC100506127A0A0U1RQW1 187 aa16.94■□□□□ 0.3
PDLIM7-203ENST00000359895 LYPD3O95274 346 aa16.94■□□□□ 0.3
PDLIM7-203ENST00000359895 MYL12AP19105 171 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms