RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 FADS1O60427 444 aa13.96□□□□□ -0.17
TPM1-206ENST00000358278 UGT2B17O75795 530 aa13.96□□□□□ -0.17
TPM1-206ENST00000358278 PDE9AO76083 593 aa13.96□□□□□ -0.17
TPM1-206ENST00000358278 HSD17B1P14061 328 aa13.96□□□□□ -0.17
TPM1-206ENST00000358278 NME2P22392 152 aa13.96□□□□□ -0.17
TPM1-206ENST00000358278 SNTA1Q13424 505 aa13.96□□□□□ -0.17
TPM1-206ENST00000358278 VEZF1Q14119 521 aa13.96□□□□□ -0.17
TPM1-206ENST00000358278 LY6DQ14210 128 aa13.96□□□□□ -0.17
TPM1-206ENST00000358278 SPATS1Q496A3 300 aa13.96□□□□□ -0.17
TPM1-206ENST00000358278 TMEM81Q6P7N7 255 aa13.96□□□□□ -0.17
TPM1-206ENST00000358278 GATSQ8NAP1 163 aa13.96□□□□□ -0.17
TPM1-206ENST00000358278 PMM1Q92871 262 aa13.96□□□□□ -0.17
TPM1-206ENST00000358278 SCMH1Q96GD3 660 aa13.96□□□□□ -0.17
TPM1-206ENST00000358278 SLC25A18Q9H1K4 315 aa13.96□□□□□ -0.17
TPM1-206ENST00000358278 SUCOQ9UBS9 1254 aaKnown RBP13.96□□□□□ -0.17
TPM1-206ENST00000358278 LHX6Q9UPM6 363 aa13.96□□□□□ -0.17
TPM1-206ENST00000358278 CENPVL1A0A0U1RR11 272 aa13.95□□□□□ -0.18
TPM1-206ENST00000358278 ALG1L2C9J202 215 aa13.95□□□□□ -0.18
TPM1-206ENST00000358278 H3BNH8 94 aa13.95□□□□□ -0.18
TPM1-206ENST00000358278 KLRC4-KLRK1H3BQV0 150 aa13.95□□□□□ -0.18
TPM1-206ENST00000358278 NDUFB5O43674 189 aa13.95□□□□□ -0.18
TPM1-206ENST00000358278 GMNNO75496 209 aa13.95□□□□□ -0.18
TPM1-206ENST00000358278 DNAJC8O75937 253 aaPredicted RBP13.95□□□□□ -0.18
TPM1-206ENST00000358278 PDE5AO76074 875 aa13.95□□□□□ -0.18
TPM1-206ENST00000358278 DBIP07108 87 aaKnown RBP13.95□□□□□ -0.18
TPM1-206ENST00000358278 ETS2P15036 469 aa13.95□□□□□ -0.18
TPM1-206ENST00000358278 IL7RP16871 459 aa13.95□□□□□ -0.18
TPM1-206ENST00000358278 MASP1P48740 699 aa13.95□□□□□ -0.18
TPM1-206ENST00000358278 RNF144AP50876 292 aaPredicted RBP13.95□□□□□ -0.18
TPM1-206ENST00000358278 NCALDP61601 193 aa13.95□□□□□ -0.18
TPM1-206ENST00000358278 CEACAM7Q14002 265 aa13.95□□□□□ -0.18
TPM1-206ENST00000358278 ZNF141Q15928 474 aa13.95□□□□□ -0.18
TPM1-206ENST00000358278 SLC30A6Q6NXT4 461 aa13.95□□□□□ -0.18
TPM1-206ENST00000358278 Q6ZS92 163 aa13.95□□□□□ -0.18
TPM1-206ENST00000358278 PATL1Q86TB9 770 aaKnown RBP13.95□□□□□ -0.18
TPM1-206ENST00000358278 MARCH3Q86UD3 253 aa13.95□□□□□ -0.18
TPM1-206ENST00000358278 PACS2Q86VP3 889 aa13.95□□□□□ -0.18
TPM1-206ENST00000358278 OR52P1PQ8NH57 321 aa13.95□□□□□ -0.18
TPM1-206ENST00000358278 WDR60Q8WVS4 1066 aa13.95□□□□□ -0.18
TPM1-206ENST00000358278 FIG4Q92562 907 aa13.95□□□□□ -0.18
TPM1-206ENST00000358278 ZG16BQ96DA0 208 aa13.95□□□□□ -0.18
TPM1-206ENST00000358278 SPATA5L1Q9BVQ7 753 aa13.95□□□□□ -0.18
TPM1-206ENST00000358278 LRMDAQ9H2I8 198 aa13.95□□□□□ -0.18
TPM1-206ENST00000358278 SEC14L3Q9UDX4 400 aa13.95□□□□□ -0.18
TPM1-206ENST00000358278 CD300AQ9UGN4 299 aa13.95□□□□□ -0.18
TPM1-206ENST00000358278 EGFL7Q9UHF1 273 aa13.95□□□□□ -0.18
TPM1-206ENST00000358278 KCNE5Q9UJ90 142 aa13.95□□□□□ -0.18
TPM1-206ENST00000358278 DTNAQ9Y4J8 743 aa13.95□□□□□ -0.18
TPM1-206ENST00000358278 PCDHGB6Q9Y5F9 930 aa13.95□□□□□ -0.18
TPM1-206ENST00000358278 WIF1Q9Y5W5 379 aa13.95□□□□□ -0.18
TPM1-206ENST00000358278 A0A0G2JMM0 328 aa13.95□□□□□ -0.18
TPM1-206ENST00000358278 A0A1W2PPB8 328 aa13.95□□□□□ -0.18
TPM1-206ENST00000358278 A0A1W2PQD3 144 aa13.95□□□□□ -0.18
TPM1-206ENST00000358278 A0A1W2PRS3 328 aa13.95□□□□□ -0.18
TPM1-206ENST00000358278 ANKRD33BA6NCL7 494 aa13.95□□□□□ -0.18
TPM1-206ENST00000358278 AGAP5A6NIR3 686 aa13.95□□□□□ -0.18
TPM1-206ENST00000358278 KIR3DP1A8MWS1 328 aa13.95□□□□□ -0.18
TPM1-206ENST00000358278 DNAJC13O75165 2243 aa13.95□□□□□ -0.18
TPM1-206ENST00000358278 SERPINB7O75635 380 aa13.95□□□□□ -0.18
TPM1-206ENST00000358278 CNR1P21554 472 aa13.95□□□□□ -0.18
TPM1-206ENST00000358278 HTR1EP28566 365 aa13.95□□□□□ -0.18
TPM1-206ENST00000358278 DNASE1L1P49184 302 aa13.95□□□□□ -0.18
TPM1-206ENST00000358278 PCBP3P57721 371 aaKnown RBP13.95□□□□□ -0.18
TPM1-206ENST00000358278 LARS2Q15031 903 aaKnown RBP13.95□□□□□ -0.18
TPM1-206ENST00000358278 MAPK14Q16539 360 aa13.95□□□□□ -0.18
TPM1-206ENST00000358278 LRRC23Q53EV4 343 aaPredicted RBP13.95□□□□□ -0.18
TPM1-206ENST00000358278 AP1ARQ63HQ0 302 aa13.95□□□□□ -0.18
TPM1-206ENST00000358278 SLC6A19Q695T7 634 aa13.95□□□□□ -0.18
TPM1-206ENST00000358278 APOOLQ6UXV4 268 aa13.95□□□□□ -0.18
TPM1-206ENST00000358278 FAM98AQ8NCA5 519 aaKnown RBP13.95□□□□□ -0.18
TPM1-206ENST00000358278 PHOSPHO1Q8TCT1 267 aa13.95□□□□□ -0.18
TPM1-206ENST00000358278 RNF138Q8WVD3 245 aa13.95□□□□□ -0.18
TPM1-206ENST00000358278 OIT3Q8WWZ8 545 aa13.95□□□□□ -0.18
TPM1-206ENST00000358278 CLPTM1LQ96KA5 538 aa13.95□□□□□ -0.18
TPM1-206ENST00000358278 JSRP1Q96MG2 331 aaPredicted RBP13.95□□□□□ -0.18
TPM1-206ENST00000358278 FAM173AQ9BQD7 235 aa13.95□□□□□ -0.18
TPM1-206ENST00000358278 ANGPTL4Q9BY76 406 aa13.95□□□□□ -0.18
TPM1-206ENST00000358278 DEPPQ9NTK1 212 aa13.95□□□□□ -0.18
TPM1-206ENST00000358278 PPP4R1LQ9P1A2 415 aa13.95□□□□□ -0.18
TPM1-206ENST00000358278 ZNF232Q9UNY5 417 aa13.95□□□□□ -0.18
TPM1-206ENST00000358278 IFT52Q9Y366 437 aa13.95□□□□□ -0.18
TPM1-206ENST00000358278 GPC6Q9Y625 555 aaPredicted RBP13.95□□□□□ -0.18
TPM1-206ENST00000358278 C2orf72A6NCS6 295 aa13.94□□□□□ -0.18
TPM1-206ENST00000358278 CXCR6O00574 342 aa13.94□□□□□ -0.18
TPM1-206ENST00000358278 PEX1O43933 1283 aa13.94□□□□□ -0.18
TPM1-206ENST00000358278 SNX4O95219 450 aa13.94□□□□□ -0.18
TPM1-206ENST00000358278 ANGPTL1O95841 491 aa13.94□□□□□ -0.18
TPM1-206ENST00000358278 RPS4Y1P22090 263 aaKnown RBP13.94□□□□□ -0.18
TPM1-206ENST00000358278 MSX2P35548 267 aaPredicted RBP13.94□□□□□ -0.18
TPM1-206ENST00000358278 PGM1P36871 562 aa13.94□□□□□ -0.18
TPM1-206ENST00000358278 PTGDSP41222 190 aa13.94□□□□□ -0.18
TPM1-206ENST00000358278 ZSCAN26Q16670 478 aa13.94□□□□□ -0.18
TPM1-206ENST00000358278 NADK2Q4G0N4 442 aa13.94□□□□□ -0.18
TPM1-206ENST00000358278 LIN52Q52LA3 116 aa13.94□□□□□ -0.18
TPM1-206ENST00000358278 KLHL26Q53HC5 615 aa13.94□□□□□ -0.18
TPM1-206ENST00000358278 ARMC8Q8IUR7 673 aa13.94□□□□□ -0.18
TPM1-206ENST00000358278 SULF2Q8IWU5 870 aa13.94□□□□□ -0.18
TPM1-206ENST00000358278 TEX19Q8NA77 164 aa13.94□□□□□ -0.18
TPM1-206ENST00000358278 OR2M7Q8NG81 312 aa13.94□□□□□ -0.18
TPM1-206ENST00000358278 SLC26A7Q8TE54 656 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms