RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 INPP5KQ9BT40 448 aa8.48□□□□□ -1.05
UPF2-202ENST00000357604 SLC6A5Q9Y345 797 aa8.48□□□□□ -1.05
UPF2-202ENST00000357604 KMT2EQ8IZD2 1858 aa8.48□□□□□ -1.05
UPF2-202ENST00000357604 UNC5CO95185 931 aa8.48□□□□□ -1.05
UPF2-202ENST00000357604 ETHE1O95571 254 aa8.48□□□□□ -1.05
UPF2-202ENST00000357604 PRKAR1BP31321 381 aa8.48□□□□□ -1.05
UPF2-202ENST00000357604 IGLV3-21P80748 117 aaPredicted RBP8.48□□□□□ -1.05
UPF2-202ENST00000357604 SELENBP1Q13228 472 aa8.48□□□□□ -1.05
UPF2-202ENST00000357604 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.48□□□□□ -1.05
UPF2-202ENST00000357604 RFX4Q33E94 735 aa8.48□□□□□ -1.05
UPF2-202ENST00000357604 COX15Q7KZN9 410 aa8.48□□□□□ -1.05
UPF2-202ENST00000357604 VN1R5Q7Z5H4 357 aa8.48□□□□□ -1.05
UPF2-202ENST00000357604 GPR137CQ8N3F9 429 aa8.48□□□□□ -1.05
UPF2-202ENST00000357604 ICA1LQ8NDH6 482 aa8.48□□□□□ -1.05
UPF2-202ENST00000357604 FCRL1Q96LA6 429 aa8.48□□□□□ -1.05
UPF2-202ENST00000357604 ANKRD27Q96NW4 1050 aa8.48□□□□□ -1.05
UPF2-202ENST00000357604 ZFP64Q9NPA5 681 aa8.48□□□□□ -1.05
UPF2-202ENST00000357604 LANCL2Q9NS86 450 aa8.48□□□□□ -1.05
UPF2-202ENST00000357604 TBC1D23Q9NUY8 699 aa8.48□□□□□ -1.05
UPF2-202ENST00000357604 RPH3AQ9Y2J0 694 aaPredicted RBP8.48□□□□□ -1.05
UPF2-202ENST00000357604 PCDHB14Q9Y5E9 798 aa8.48□□□□□ -1.05
UPF2-202ENST00000357604 DHRS12A0PJE2 317 aa8.48□□□□□ -1.05
UPF2-202ENST00000357604 H3BN98 237 aa8.48□□□□□ -1.05
UPF2-202ENST00000357604 HTR1EP28566 365 aa8.48□□□□□ -1.05
UPF2-202ENST00000357604 IDH2P48735 452 aaKnown RBP8.48□□□□□ -1.05
UPF2-202ENST00000357604 DAP3P51398 398 aaKnown RBP8.48□□□□□ -1.05
UPF2-202ENST00000357604 SLC16A1P53985 500 aa8.48□□□□□ -1.05
UPF2-202ENST00000357604 CASP9P55211 416 aa8.48□□□□□ -1.05
UPF2-202ENST00000357604 TMEM44Q2T9K0 475 aa8.48□□□□□ -1.05
UPF2-202ENST00000357604 TRMT12Q53H54 448 aaKnown RBP8.48□□□□□ -1.05
UPF2-202ENST00000357604 RUNDC3AQ59EK9 446 aa8.48□□□□□ -1.05
UPF2-202ENST00000357604 ULK3Q6PHR2 472 aa8.48□□□□□ -1.05
UPF2-202ENST00000357604 SSX8Q7RTT4 187 aa8.48□□□□□ -1.05
UPF2-202ENST00000357604 PRSS41Q7RTY9 318 aa8.48□□□□□ -1.05
UPF2-202ENST00000357604 MARCH9Q86YJ5 346 aa8.48□□□□□ -1.05
UPF2-202ENST00000357604 OR4C15Q8NGM1 316 aa8.48□□□□□ -1.05
UPF2-202ENST00000357604 OR9Q1Q8NGQ5 310 aa8.48□□□□□ -1.05
UPF2-202ENST00000357604 EME1Q96AY2 570 aa8.48□□□□□ -1.05
UPF2-202ENST00000357604 SH3GL3Q99963 347 aa8.48□□□□□ -1.05
UPF2-202ENST00000357604 MAGIXQ9H6Y5 334 aa8.48□□□□□ -1.05
UPF2-202ENST00000357604 ARL8BQ9NVJ2 186 aa8.48□□□□□ -1.05
UPF2-202ENST00000357604 IL17BQ9UHF5 180 aa8.48□□□□□ -1.05
UPF2-202ENST00000357604 SAMHD1Q9Y3Z3 626 aaKnown RBP8.48□□□□□ -1.05
UPF2-202ENST00000357604 A6NIZ1 184 aa8.48□□□□□ -1.05
UPF2-202ENST00000357604 WNT11O96014 354 aa8.48□□□□□ -1.05
UPF2-202ENST00000357604 CHMP24386 653 aa8.48□□□□□ -1.05
UPF2-202ENST00000357604 HOXD11P31277 338 aaPredicted RBP8.48□□□□□ -1.05
UPF2-202ENST00000357604 PTGS2P35354 604 aa8.48□□□□□ -1.05
UPF2-202ENST00000357604 SESN3P58005 492 aa8.48□□□□□ -1.05
UPF2-202ENST00000357604 RAP1BP61224 184 aa8.48□□□□□ -1.05
UPF2-202ENST00000357604 RAP1AP62834 184 aa8.48□□□□□ -1.05
UPF2-202ENST00000357604 FUT7Q11130 342 aa8.48□□□□□ -1.05
UPF2-202ENST00000357604 FAM205BPQ63HN1 556 aa8.48□□□□□ -1.05
UPF2-202ENST00000357604 TMEM53Q6P2H8 277 aa8.48□□□□□ -1.05
UPF2-202ENST00000357604 KLHL17Q6TDP4 642 aa8.48□□□□□ -1.05
UPF2-202ENST00000357604 HIPK1Q86Z02 1210 aa8.48□□□□□ -1.05
UPF2-202ENST00000357604 MMP21Q8N119 569 aa8.48□□□□□ -1.05
UPF2-202ENST00000357604 CPT1CQ8TCG5 803 aa8.48□□□□□ -1.05
UPF2-202ENST00000357604 PTPMT1Q8WUK0 201 aaPredicted RBP8.48□□□□□ -1.05
UPF2-202ENST00000357604 PYURFQ96I23 114 aa8.48□□□□□ -1.05
UPF2-202ENST00000357604 OSBPL10Q9BXB5 764 aa8.48□□□□□ -1.05
UPF2-202ENST00000357604 CXorf36Q9H7Y0 433 aa8.48□□□□□ -1.05
UPF2-202ENST00000357604 MKLN1Q9UL63 735 aa8.48□□□□□ -1.05
UPF2-202ENST00000357604 SH3GLB1Q9Y371 365 aa8.48□□□□□ -1.05
UPF2-202ENST00000357604 WIF1Q9Y5W5 379 aa8.48□□□□□ -1.05
UPF2-202ENST00000357604 HS3ST3B1Q9Y662 390 aa8.48□□□□□ -1.05
UPF2-202ENST00000357604 A0A1W2PQD3 144 aa8.47□□□□□ -1.05
UPF2-202ENST00000357604 AQP12BA6NM10 295 aa8.47□□□□□ -1.05
UPF2-202ENST00000357604 M0QX08 132 aa8.47□□□□□ -1.05
UPF2-202ENST00000357604 GPR171O14626 319 aa8.47□□□□□ -1.05
UPF2-202ENST00000357604 KCNK2O95069 426 aa8.47□□□□□ -1.05
UPF2-202ENST00000357604 CBX6O95503 412 aa8.47□□□□□ -1.05
UPF2-202ENST00000357604 F10P00742 488 aa8.47□□□□□ -1.05
UPF2-202ENST00000357604 THBS1P07996 1170 aa8.47□□□□□ -1.05
UPF2-202ENST00000357604 PAX7P23759 505 aa8.47□□□□□ -1.05
UPF2-202ENST00000357604 CLK1P49759 484 aaKnown RBP8.47□□□□□ -1.05
UPF2-202ENST00000357604 RPS26P62854 115 aaKnown RBP8.47□□□□□ -1.05
UPF2-202ENST00000357604 HBA1P69905 142 aa8.47□□□□□ -1.05
UPF2-202ENST00000357604 TGFBR3Q03167 851 aa8.47□□□□□ -1.05
UPF2-202ENST00000357604 NANOGP8Q6NSW7 305 aa8.47□□□□□ -1.05
UPF2-202ENST00000357604 C3orf33Q6P1S2 294 aa8.47□□□□□ -1.05
UPF2-202ENST00000357604 FAM220AQ7Z4H9 259 aa8.47□□□□□ -1.05
UPF2-202ENST00000357604 UBE3DQ7Z6J8 389 aa8.47□□□□□ -1.05
UPF2-202ENST00000357604 MARCH3Q86UD3 253 aa8.47□□□□□ -1.05
UPF2-202ENST00000357604 ZDHHC13Q8IUH4 622 aa8.47□□□□□ -1.05
UPF2-202ENST00000357604 AQP12AQ8IXF9 295 aa8.47□□□□□ -1.05
UPF2-202ENST00000357604 SETD9Q8NE22 299 aa8.47□□□□□ -1.05
UPF2-202ENST00000357604 ZNF721Q8TF20 911 aa8.47□□□□□ -1.05
UPF2-202ENST00000357604 SGTBQ96EQ0 304 aa8.47□□□□□ -1.05
UPF2-202ENST00000357604 APOL4Q9BPW4 351 aa8.47□□□□□ -1.05
UPF2-202ENST00000357604 NANOGQ9H9S0 305 aa8.47□□□□□ -1.05
UPF2-202ENST00000357604 PROCRQ9UNN8 238 aa8.47□□□□□ -1.05
UPF2-202ENST00000357604 PCDHGA10Q9Y5H3 936 aa8.47□□□□□ -1.05
UPF2-202ENST00000357604 LOC102723996A0A087X1L8 192 aa8.47□□□□□ -1.05
UPF2-202ENST00000357604 OR6C65A6NJZ3 312 aa8.47□□□□□ -1.05
UPF2-202ENST00000357604 CPSF4LA6NMK7 179 aaKnown RBP8.47□□□□□ -1.05
UPF2-202ENST00000357604 HSPB2A8KAH6 182 aa8.47□□□□□ -1.05
UPF2-202ENST00000357604 RNF13O43567 381 aa8.47□□□□□ -1.05
UPF2-202ENST00000357604 NME2P1O60361 137 aa8.47□□□□□ -1.05
UPF2-202ENST00000357604 NME6O75414 186 aaPredicted RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms