RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 VOPP1Q96AW1 172 aa7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 TIFAQ96CG3 184 aa7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 TRMT2BQ96GJ1 504 aaKnown RBP7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 C10orf90Q96M02 699 aa7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 ERMAPQ96PL5 475 aaPredicted RBP7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 SLC38A2Q96QD8 506 aa7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 DPH7Q9BTV6 452 aa7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 POLDIP3Q9BY77 421 aaKnown RBP7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 ABCG5Q9H222 651 aa7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 ELAC1Q9H777 363 aaKnown RBP7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 NT5DC2Q9H857 520 aa7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 IL21Q9HBE4 155 aa7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 NUDT15Q9NV35 164 aa7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 AHSPQ9NZD4 102 aa7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 H2AFY2Q9P0M6 372 aaPredicted RBP7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 P2RX2Q9UBL9 471 aa7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 PURGQ9UJV8 347 aaKnown RBP7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 PCDHGB7Q9Y5F8 929 aa7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 BACE2Q9Y5Z0 518 aa7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 SLC22A7Q9Y694 548 aa7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 TCRBV16S1A1N1A0A5B0 115 aa7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 FOXE1O00358 373 aaPredicted RBP7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 GABRPO00591 440 aa7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 PRODHO43272 600 aa7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 EEF1E1O43324 174 aaKnown RBP7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 EIF1BO60739 113 aaKnown RBP7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 POP7O75817 140 aaKnown RBP7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 TOXO94900 526 aa7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 LRG1P02750 347 aa7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 ACP2P11117 423 aa7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 TIMP2P16035 220 aa7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 EIF1P41567 113 aaKnown RBP7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 GPR1P46091 355 aa7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 SRP9P49458 86 aaKnown RBP7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 PRLHRP49683 370 aa7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 PNLIPRP1P54315 467 aa7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 BTG1P62324 171 aa7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 DEFA5Q01523 94 aa7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 SF3A2Q15428 464 aaKnown RBP7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 SMAD2Q15796 467 aaKnown RBP7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 OCLNQ16625 522 aa7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 FAM27D1Q5T7N8 215 aa7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 ZNF425Q6IV72 752 aa7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 SLC36A4Q6YBV0 504 aa7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 KRT78Q8N1N4 520 aa7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 AMER3Q8N944 861 aa7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 BBS1Q8NFJ9 593 aa7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 BEST4Q8NFU0 473 aa7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 OR11H7Q8NGC8 314 aa7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 NSMAFQ92636 917 aa7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 NEURL3Q96EH8 262 aa7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 SLC35G5Q96KT7 338 aa7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 ZNF285Q96NJ3 590 aa7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 MNTQ99583 582 aa7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 ZNF251Q9BRH9 671 aa7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 TTTY10Q9BZA0 68 aa7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 BABAM2Q9NXR7 383 aa7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 FBXL2Q9UKC9 423 aa7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 ERVK-19Q9WJR5 959 aa7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 KCNK7Q9Y2U2 307 aa7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 CDH10Q9Y6N8 788 aa7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 DOCK6Q96HP0 2047 aa7.71□□□□□ -1.17
CDC42SE1-201ENST00000357235 LOC105369274A0A096LPK9 316 aa7.71□□□□□ -1.17
CDC42SE1-201ENST00000357235 A0A1W2PPK0 400 aa7.71□□□□□ -1.17
CDC42SE1-201ENST00000357235 ARRDC5A6NEK1 342 aa7.71□□□□□ -1.17
CDC42SE1-201ENST00000357235 TRABD2BA6NFA1 517 aa7.71□□□□□ -1.17
CDC42SE1-201ENST00000357235 GTPBP1O00178 669 aaKnown RBP7.71□□□□□ -1.17
CDC42SE1-201ENST00000357235 QSOX1O00391 747 aa7.71□□□□□ -1.17
CDC42SE1-201ENST00000357235 OR1F1O43749 312 aa7.71□□□□□ -1.17
CDC42SE1-201ENST00000357235 LANCL1O43813 399 aa7.71□□□□□ -1.17
CDC42SE1-201ENST00000357235 SLC2A10O95528 541 aa7.71□□□□□ -1.17
CDC42SE1-201ENST00000357235 ADRB1P08588 477 aa7.71□□□□□ -1.17
CDC42SE1-201ENST00000357235 LIMS3P0CW19 117 aa7.71□□□□□ -1.17
CDC42SE1-201ENST00000357235 LIMS4P0CW20 117 aa7.71□□□□□ -1.17
CDC42SE1-201ENST00000357235 TYRP14679 529 aa7.71□□□□□ -1.17
CDC42SE1-201ENST00000357235 GNSP15586 552 aa7.71□□□□□ -1.17
CDC42SE1-201ENST00000357235 ELK1P19419 428 aa7.71□□□□□ -1.17
CDC42SE1-201ENST00000357235 GABRA5P31644 462 aa7.71□□□□□ -1.17
CDC42SE1-201ENST00000357235 SLC1A3P43003 542 aa7.71□□□□□ -1.17
CDC42SE1-201ENST00000357235 NCBP2P52298 156 aaKnown RBP eCLIP7.71□□□□□ -1.17
CDC42SE1-201ENST00000357235 RPS7P62081 194 aaKnown RBP7.71□□□□□ -1.17
CDC42SE1-201ENST00000357235 CRYZQ08257 329 aaKnown RBP7.71□□□□□ -1.17
CDC42SE1-201ENST00000357235 ZSWIM7Q19AV6 140 aa7.71□□□□□ -1.17
CDC42SE1-201ENST00000357235 NHLRC3Q5JS37 347 aa7.71□□□□□ -1.17
CDC42SE1-201ENST00000357235 TMEM201Q5SNT2 666 aa7.71□□□□□ -1.17
CDC42SE1-201ENST00000357235 PIP5KL1Q5T9C9 394 aa7.71□□□□□ -1.17
CDC42SE1-201ENST00000357235 TPGS2Q68CL5 300 aa7.71□□□□□ -1.17
CDC42SE1-201ENST00000357235 RGS7BPQ6MZT1 257 aaPredicted RBP7.71□□□□□ -1.17
CDC42SE1-201ENST00000357235 QSOX2Q6ZRP7 698 aa7.71□□□□□ -1.17
CDC42SE1-201ENST00000357235 C17orf64Q86WR6 236 aa7.71□□□□□ -1.17
CDC42SE1-201ENST00000357235 OR4N4Q8N0Y3 316 aa7.71□□□□□ -1.17
CDC42SE1-201ENST00000357235 SAMD12Q8N8I0 201 aa7.71□□□□□ -1.17
CDC42SE1-201ENST00000357235 GANCQ8TET4 914 aa7.71□□□□□ -1.17
CDC42SE1-201ENST00000357235 SPRYD4Q8WW59 207 aaPredicted RBP7.71□□□□□ -1.17
CDC42SE1-201ENST00000357235 OR5P2Q8WZ92 322 aa7.71□□□□□ -1.17
CDC42SE1-201ENST00000357235 SENP5Q96HI0 755 aaPredicted RBP7.71□□□□□ -1.17
CDC42SE1-201ENST00000357235 CXorf58Q96LI9 332 aa7.71□□□□□ -1.17
CDC42SE1-201ENST00000357235 ZFP3Q96NJ6 502 aa7.71□□□□□ -1.17
CDC42SE1-201ENST00000357235 BBS4Q96RK4 519 aa7.71□□□□□ -1.17
CDC42SE1-201ENST00000357235 SLC46A2Q9BY10 475 aa7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms