RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 RPS26P62854 115 aaKnown RBP6.1□□□□□ -1.43
UPF2-201ENST00000356352 RAB40BQ12829 278 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 CMPK2Q5EBM0 449 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 LYSMD4Q5XG99 296 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 SMIM15Q7Z3B0 74 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 MRPL10Q7Z7H8 261 aaKnown RBP6.1□□□□□ -1.43
UPF2-201ENST00000356352 OR11L1Q8NGX0 322 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 STK35Q8TDR2 534 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 NAT6Q93015 286 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 FUBP1Q96AE4 644 aaKnown RBP6.1□□□□□ -1.43
UPF2-201ENST00000356352 UBXN10Q96LJ8 280 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 SAMD8Q96LT4 415 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 PRRC1Q96M27 445 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 INTS14Q96SY0 518 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 CPEB1Q9BZB8 566 aaKnown RBP6.1□□□□□ -1.43
UPF2-201ENST00000356352 NMNAT1Q9HAN9 279 aaPredicted RBP6.1□□□□□ -1.43
UPF2-201ENST00000356352 DMRT3Q9NQL9 472 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 INIPQ9NRY2 104 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 ERVK13-1Q9NX77 482 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 BOKQ9UMX3 212 aaPredicted RBP6.1□□□□□ -1.43
UPF2-201ENST00000356352 POLHQ9Y253 713 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 ZNF337Q9Y3M9 751 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 LSM5Q9Y4Y9 91 aaKnown RBP6.1□□□□□ -1.43
UPF2-201ENST00000356352 FUOMA2VDF0 154 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 M0QZQ0 153 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 LYRM1O43325 122 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 RFPL2O75678 378 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 RAB3DO95716 219 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 MSL3P1P0C860 447 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 ZNF888P0CJ79 500 aaPredicted RBP6.1□□□□□ -1.43
UPF2-201ENST00000356352 ICAM2P13598 275 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 TPT1P13693 172 aaKnown RBP6.1□□□□□ -1.43
UPF2-201ENST00000356352 RAB4AP20338 218 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 BDKRB2P30411 391 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 CSNK1DP48730 415 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 ZNF136P52737 540 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 NKX6-1P78426 367 aaPredicted RBP6.1□□□□□ -1.43
UPF2-201ENST00000356352 ESCO2Q56NI9 601 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 KDELC1Q6UW63 502 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 CCBE1Q6UXH8 406 aaPredicted RBP6.1□□□□□ -1.43
UPF2-201ENST00000356352 USP53Q70EK8 1073 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 SERPINA11Q86U17 422 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 COMMD7Q86VX2 200 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 TCEAL8Q8IYN2 117 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 APCDD1Q8J025 514 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 CPXM2Q8N436 756 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 KDM1BQ8NB78 822 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 OR4K15Q8NH41 348 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 TMEM239Q8WW34 195 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 CCNL2Q96S94 520 aaPredicted RBP6.1□□□□□ -1.43
UPF2-201ENST00000356352 FEVQ99581 238 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 ARMC1Q9NVT9 282 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 GPR83Q9NYM4 423 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 NME7Q9Y5B8 376 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 CACNG2Q9Y698 323 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 BAZ2BQ9UIF8 2168 aaKnown RBP6.1□□□□□ -1.43
UPF2-201ENST00000356352 ZNF736B4DX44 427 aaPredicted RBP6.1□□□□□ -1.43
UPF2-201ENST00000356352 GMDSO60547 372 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 TIMP1P01033 207 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 APOC3P02656 99 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 CSF2RAP15509 400 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 EPHA1P21709 976 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 SF3A2Q15428 464 aaKnown RBP6.1□□□□□ -1.43
UPF2-201ENST00000356352 DCST2Q5T1A1 773 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 CCNJQ5T5M9 372 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 HES5Q5TA89 166 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 AGAP7PQ5VUJ5 663 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 AGAP6Q5VW22 663 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 DPY19L4Q7Z388 723 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 OR5D16Q8NGK9 328 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 OR1J2Q8NGS2 313 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 OR13J1Q8NGT2 312 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 OR51Q1Q8NH59 317 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 RHBDD1Q8TEB9 315 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 ZNF296Q8WUU4 475 aaPredicted RBP6.1□□□□□ -1.43
UPF2-201ENST00000356352 ITPKCQ96DU7 683 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 RTP4Q96DX8 246 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 AGAP4Q96P64 663 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 MICU1Q9BPX6 476 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 TIMM29Q9BSF4 260 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 NICN1Q9BSH3 213 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 MYOTQ9UBF9 498 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 ATXN7L1Q9ULK2 861 aaPredicted RBP6.1□□□□□ -1.43
UPF2-201ENST00000356352 A8MV72 311 aaPredicted RBP6.1□□□□□ -1.43
UPF2-201ENST00000356352 SLC22A5O76082 557 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 FUT1P19526 365 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 MSR1P21757 451 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 CERS1P27544 350 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 SOX3P41225 446 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 RNF144AP50876 292 aaPredicted RBP6.1□□□□□ -1.43
UPF2-201ENST00000356352 IDH3GP51553 393 aaPredicted RBP6.1□□□□□ -1.43
UPF2-201ENST00000356352 FXYD4P59646 89 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 NCS1P62166 190 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 MOGSQ13724 837 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 WBP2NLQ6ICG8 309 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 OPN5Q6U736 354 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 TECPR1Q7Z6L1 1165 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 UCN3Q969E3 161 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 SORCS2Q96PQ0 1159 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 C1QTNF2Q9BXJ5 285 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms