RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 KRT72Q14CN4 511 aa16.32■□□□□ 0.2
PDLIM7-202ENST00000355841 KLHL26Q53HC5 615 aa16.32■□□□□ 0.2
PDLIM7-202ENST00000355841 TRPM8Q7Z2W7 1104 aa16.32■□□□□ 0.2
PDLIM7-202ENST00000355841 PTOV1Q86YD1 416 aa16.32■□□□□ 0.2
PDLIM7-202ENST00000355841 TMEM251Q8N6I4 163 aa16.32■□□□□ 0.2
PDLIM7-202ENST00000355841 OR8J3Q8NGG0 315 aa16.32■□□□□ 0.2
PDLIM7-202ENST00000355841 TMEM41AQ96HV5 264 aa16.32■□□□□ 0.2
PDLIM7-202ENST00000355841 TREX2Q9BQ50 279 aaPredicted RBP16.32■□□□□ 0.2
PDLIM7-202ENST00000355841 GPATCH1Q9BRR8 931 aaKnown RBP16.32■□□□□ 0.2
PDLIM7-202ENST00000355841 CMTM6Q9NX76 183 aa16.32■□□□□ 0.2
PDLIM7-202ENST00000355841 THUMPD1Q9NXG2 353 aaKnown RBP16.32■□□□□ 0.2
PDLIM7-202ENST00000355841 FBXL2Q9UKC9 423 aa16.32■□□□□ 0.2
PDLIM7-202ENST00000355841 BOKQ9UMX3 212 aaPredicted RBP16.32■□□□□ 0.2
PDLIM7-202ENST00000355841 ALG1L2C9J202 215 aa16.31■□□□□ 0.2
PDLIM7-202ENST00000355841 NPIPA5E9PKD4 350 aa16.31■□□□□ 0.2
PDLIM7-202ENST00000355841 TFECO14948 347 aaPredicted RBP16.31■□□□□ 0.2
PDLIM7-202ENST00000355841 NDUFB5O43674 189 aa16.31■□□□□ 0.2
PDLIM7-202ENST00000355841 GLSO94925 669 aaPredicted RBP16.31■□□□□ 0.2
PDLIM7-202ENST00000355841 NGFRP08138 427 aa16.31■□□□□ 0.2
PDLIM7-202ENST00000355841 ARAFP10398 606 aa16.31■□□□□ 0.2
PDLIM7-202ENST00000355841 LCN1P31025 176 aa16.31■□□□□ 0.2
PDLIM7-202ENST00000355841 CLK3P49761 638 aaKnown RBP16.31■□□□□ 0.2
PDLIM7-202ENST00000355841 ALDH6A1Q02252 535 aaKnown RBP16.31■□□□□ 0.2
PDLIM7-202ENST00000355841 NDUFAF6Q330K2 333 aa16.31■□□□□ 0.2
PDLIM7-202ENST00000355841 TIGD3Q6B0B8 471 aa16.31■□□□□ 0.2
PDLIM7-202ENST00000355841 LRRC74BQ6ZQY2 392 aa16.31■□□□□ 0.2
PDLIM7-202ENST00000355841 ZNF619Q8N2I2 560 aa16.31■□□□□ 0.2
PDLIM7-202ENST00000355841 OR1J4Q8NGS1 313 aa16.31■□□□□ 0.2
PDLIM7-202ENST00000355841 FAR1Q8WVX9 515 aa16.31■□□□□ 0.2
PDLIM7-202ENST00000355841 SH3YL1Q96HL8 342 aaPredicted RBP16.31■□□□□ 0.2
PDLIM7-202ENST00000355841 ECSITQ9BQ95 431 aa16.31■□□□□ 0.2
PDLIM7-202ENST00000355841 SAP130Q9H0E3 1048 aa16.31■□□□□ 0.2
PDLIM7-202ENST00000355841 DEFB127Q9H1M4 99 aa16.31■□□□□ 0.2
PDLIM7-202ENST00000355841 OLAHQ9NV23 265 aa16.31■□□□□ 0.2
PDLIM7-202ENST00000355841 MED11Q9P086 117 aa16.31■□□□□ 0.2
PDLIM7-202ENST00000355841 PPP4R1LQ9P1A2 415 aa16.31■□□□□ 0.2
PDLIM7-202ENST00000355841 NPIPA1Q9UND3 350 aa16.31■□□□□ 0.2
PDLIM7-202ENST00000355841 TMEM247A6NEH6 219 aa16.3■□□□□ 0.2
PDLIM7-202ENST00000355841 CLDN24A6NM45 220 aa16.3■□□□□ 0.2
PDLIM7-202ENST00000355841 C5orf58C9J3I9 102 aa16.3■□□□□ 0.2
PDLIM7-202ENST00000355841 SNPHO15079 494 aa16.3■□□□□ 0.2
PDLIM7-202ENST00000355841 ZNHIT1O43257 154 aa16.3■□□□□ 0.2
PDLIM7-202ENST00000355841 PDE9AO76083 593 aa16.3■□□□□ 0.2
PDLIM7-202ENST00000355841 CRYABP02511 175 aaKnown RBP16.3■□□□□ 0.2
PDLIM7-202ENST00000355841 ESRRAP11474 423 aaPredicted RBP16.3■□□□□ 0.2
PDLIM7-202ENST00000355841 AQP1P29972 269 aa16.3■□□□□ 0.2
PDLIM7-202ENST00000355841 GZMMP51124 257 aa16.3■□□□□ 0.2
PDLIM7-202ENST00000355841 SLC7A2P52569 658 aa16.3■□□□□ 0.2
PDLIM7-202ENST00000355841 CRISP3P54108 245 aa16.3■□□□□ 0.2
PDLIM7-202ENST00000355841 CDK6Q00534 326 aa16.3■□□□□ 0.2
PDLIM7-202ENST00000355841 TLE1Q04724 770 aa16.3■□□□□ 0.2
PDLIM7-202ENST00000355841 C8orf82Q6P1X6 216 aaPredicted RBP16.3■□□□□ 0.2
PDLIM7-202ENST00000355841 ZNF527Q8NB42 609 aa16.3■□□□□ 0.2
PDLIM7-202ENST00000355841 PHOSPHO1Q8TCT1 267 aa16.3■□□□□ 0.2
PDLIM7-202ENST00000355841 ARSGQ96EG1 525 aa16.3■□□□□ 0.2
PDLIM7-202ENST00000355841 SH3GL1Q99961 368 aa16.3■□□□□ 0.2
PDLIM7-202ENST00000355841 KLHDC3Q9BQ90 382 aa16.3■□□□□ 0.2
PDLIM7-202ENST00000355841 HOXD1Q9GZZ0 328 aa16.3■□□□□ 0.2
PDLIM7-202ENST00000355841 ZNF703Q9H7S9 590 aaPredicted RBP16.3■□□□□ 0.2
PDLIM7-202ENST00000355841 POLE3Q9NRF9 147 aa16.3■□□□□ 0.2
PDLIM7-202ENST00000355841 OIP5O43482 229 aa16.3■□□□□ 0.2
PDLIM7-202ENST00000355841 BCAS1O75363 584 aaPredicted RBP16.3■□□□□ 0.2
PDLIM7-202ENST00000355841 T-ENOLP0DO92 83 aa16.3■□□□□ 0.2
PDLIM7-202ENST00000355841 TCEA1P23193 301 aaKnown RBP16.3■□□□□ 0.2
PDLIM7-202ENST00000355841 GDF1P27539 372 aa16.3■□□□□ 0.2
PDLIM7-202ENST00000355841 PSME3P61289 254 aa16.3■□□□□ 0.2
PDLIM7-202ENST00000355841 SLC25A3Q00325 362 aa16.3■□□□□ 0.2
PDLIM7-202ENST00000355841 SCARB2Q14108 478 aa16.3■□□□□ 0.2
PDLIM7-202ENST00000355841 TOMM20Q15388 145 aa16.3■□□□□ 0.2
PDLIM7-202ENST00000355841 ZNF141Q15928 474 aa16.3■□□□□ 0.2
PDLIM7-202ENST00000355841 ZNF324BQ6AW86 544 aaPredicted RBP16.3■□□□□ 0.2
PDLIM7-202ENST00000355841 HACD2Q6Y1H2 254 aa16.3■□□□□ 0.2
PDLIM7-202ENST00000355841 SLC22A16Q86VW1 577 aa16.3■□□□□ 0.2
PDLIM7-202ENST00000355841 IFNEQ86WN2 208 aa16.3■□□□□ 0.2
PDLIM7-202ENST00000355841 PLCZ1Q86YW0 608 aa16.3■□□□□ 0.2
PDLIM7-202ENST00000355841 SIAH3Q8IW03 269 aa16.3■□□□□ 0.2
PDLIM7-202ENST00000355841 SLC15A3Q8IY34 581 aa16.3■□□□□ 0.2
PDLIM7-202ENST00000355841 ZZZ3Q8IYH5 903 aa16.3■□□□□ 0.2
PDLIM7-202ENST00000355841 NR4A3Q92570 626 aa16.3■□□□□ 0.2
PDLIM7-202ENST00000355841 NSL1Q96IY1 281 aa16.3■□□□□ 0.2
PDLIM7-202ENST00000355841 ZNF583Q96ND8 569 aa16.3■□□□□ 0.2
PDLIM7-202ENST00000355841 DSN1Q9H410 356 aa16.3■□□□□ 0.2
PDLIM7-202ENST00000355841 TMEM38AQ9H6F2 299 aa16.3■□□□□ 0.2
PDLIM7-202ENST00000355841 MTHFD2LQ9H903 347 aaPredicted RBP16.3■□□□□ 0.2
PDLIM7-202ENST00000355841 DTNAQ9Y4J8 743 aa16.3■□□□□ 0.2
PDLIM7-202ENST00000355841 PGM3O95394 542 aa16.29■□□□□ 0.2
PDLIM7-202ENST00000355841 HSF1Q00613 529 aa16.29■□□□□ 0.2
PDLIM7-202ENST00000355841 IGFBP7Q16270 282 aa16.29■□□□□ 0.2
PDLIM7-202ENST00000355841 CMPK2Q5EBM0 449 aa16.29■□□□□ 0.2
PDLIM7-202ENST00000355841 SERPINA11Q86U17 422 aa16.29■□□□□ 0.2
PDLIM7-202ENST00000355841 CALHM3Q86XJ0 350 aa16.29■□□□□ 0.2
PDLIM7-202ENST00000355841 BARD1Q99728 777 aaKnown RBP16.29■□□□□ 0.2
PDLIM7-202ENST00000355841 HOPXQ9BPY8 73 aaPredicted RBP16.29■□□□□ 0.2
PDLIM7-202ENST00000355841 AGPAT4Q9NRZ5 378 aa16.29■□□□□ 0.2
PDLIM7-202ENST00000355841 CALML5Q9NZT1 146 aa16.29■□□□□ 0.2
PDLIM7-202ENST00000355841 PACSIN3Q9UKS6 424 aa16.29■□□□□ 0.2
PDLIM7-202ENST00000355841 CARD8Q9Y2G2 431 aa16.29■□□□□ 0.2
PDLIM7-202ENST00000355841 C15orf41Q9Y2V0 281 aa16.29■□□□□ 0.2
PDLIM7-202ENST00000355841 RRP15Q9Y3B9 282 aaKnown RBP16.29■□□□□ 0.2
PDLIM7-202ENST00000355841 L3MBTL1Q9Y468 752 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms