RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 SLC6A15Q9H2J7 730 aa9.45□□□□□ -0.9
SYNE1-203ENST00000354674 KRT84Q9NSB2 600 aa9.45□□□□□ -0.9
SYNE1-203ENST00000354674 TMEM184CQ9NVA4 438 aa9.45□□□□□ -0.9
SYNE1-203ENST00000354674 SNX11Q9Y5W9 270 aa9.45□□□□□ -0.9
SYNE1-203ENST00000354674 MAGEB17A8MXT2 336 aa9.45□□□□□ -0.9
SYNE1-203ENST00000354674 H7C2Y5 167 aa9.45□□□□□ -0.9
SYNE1-203ENST00000354674 TNFSF14O43557 240 aa9.45□□□□□ -0.9
SYNE1-203ENST00000354674 SLC2A2P11168 524 aaPredicted RBP9.45□□□□□ -0.9
SYNE1-203ENST00000354674 BTF3P20290 206 aaKnown RBP9.45□□□□□ -0.9
SYNE1-203ENST00000354674 AKR1C2P52895 323 aa9.45□□□□□ -0.9
SYNE1-203ENST00000354674 CASP6P55212 293 aa9.45□□□□□ -0.9
SYNE1-203ENST00000354674 HHEXQ03014 270 aa9.45□□□□□ -0.9
SYNE1-203ENST00000354674 AKR1C1Q04828 323 aa9.45□□□□□ -0.9
SYNE1-203ENST00000354674 IL18Q14116 193 aa9.45□□□□□ -0.9
SYNE1-203ENST00000354674 LGALSLQ3ZCW2 172 aaPredicted RBP9.45□□□□□ -0.9
SYNE1-203ENST00000354674 SFRP5Q5T4F7 317 aa9.45□□□□□ -0.9
SYNE1-203ENST00000354674 GPR139Q6DWJ6 353 aa9.45□□□□□ -0.9
SYNE1-203ENST00000354674 TMIGD1Q6UXZ0 262 aa9.45□□□□□ -0.9
SYNE1-203ENST00000354674 RTL4Q6ZR62 310 aa9.45□□□□□ -0.9
SYNE1-203ENST00000354674 EIF3MQ7L2H7 374 aaKnown RBP9.45□□□□□ -0.9
SYNE1-203ENST00000354674 SYT12Q8IV01 421 aa9.45□□□□□ -0.9
SYNE1-203ENST00000354674 RNF175Q8N4F7 328 aa9.45□□□□□ -0.9
SYNE1-203ENST00000354674 LRRC17Q8N6Y2 441 aa9.45□□□□□ -0.9
SYNE1-203ENST00000354674 ZNF740Q8NDX6 193 aa9.45□□□□□ -0.9
SYNE1-203ENST00000354674 YIPF5Q969M3 257 aa9.45□□□□□ -0.9
SYNE1-203ENST00000354674 ELP4Q96EB1 424 aa9.45□□□□□ -0.9
SYNE1-203ENST00000354674 AIF1LQ9BQI0 150 aa9.45□□□□□ -0.9
SYNE1-203ENST00000354674 HDHD2Q9H0R4 259 aa9.45□□□□□ -0.9
SYNE1-203ENST00000354674 ACTL8Q9H568 366 aa9.45□□□□□ -0.9
SYNE1-203ENST00000354674 HEXA-AS1Q9H8Q6 139 aa9.45□□□□□ -0.9
SYNE1-203ENST00000354674 MRPS30Q9NP92 439 aaKnown RBP9.45□□□□□ -0.9
SYNE1-203ENST00000354674 DMRT3Q9NQL9 472 aa9.45□□□□□ -0.9
SYNE1-203ENST00000354674 NANSQ9NR45 359 aa9.45□□□□□ -0.9
SYNE1-203ENST00000354674 NKIRAS2Q9NYR9 191 aa9.45□□□□□ -0.9
SYNE1-203ENST00000354674 TAS2R7Q9NYW3 318 aa9.45□□□□□ -0.9
SYNE1-203ENST00000354674 ZIM2Q9NZV7 527 aa9.45□□□□□ -0.9
SYNE1-203ENST00000354674 VAPAQ9P0L0 249 aa9.45□□□□□ -0.9
SYNE1-203ENST00000354674 VPS29Q9UBQ0 182 aa9.45□□□□□ -0.9
SYNE1-203ENST00000354674 ENTPD2Q9Y5L3 495 aa9.45□□□□□ -0.9
SYNE1-203ENST00000354674 BDP1A6H8Y1 2624 aa9.44□□□□□ -0.9
SYNE1-203ENST00000354674 H7BY64 318 aa9.44□□□□□ -0.9
SYNE1-203ENST00000354674 SLC22A3O75751 556 aa9.44□□□□□ -0.9
SYNE1-203ENST00000354674 APOL3O95236 402 aa9.44□□□□□ -0.9
SYNE1-203ENST00000354674 ETHE1O95571 254 aa9.44□□□□□ -0.9
SYNE1-203ENST00000354674 TBX6O95947 436 aaPredicted RBP9.44□□□□□ -0.9
SYNE1-203ENST00000354674 GIMD1P0DJR0 217 aa9.44□□□□□ -0.9
SYNE1-203ENST00000354674 PTAFRP25105 342 aa9.44□□□□□ -0.9
SYNE1-203ENST00000354674 MAZP56270 477 aaKnown RBP9.44□□□□□ -0.9
SYNE1-203ENST00000354674 MEF2AQ02078 507 aaPredicted RBP9.44□□□□□ -0.9
SYNE1-203ENST00000354674 FADDQ13158 208 aa9.44□□□□□ -0.9
SYNE1-203ENST00000354674 MTFR2Q6P444 385 aa9.44□□□□□ -0.9
SYNE1-203ENST00000354674 NLRC3Q7RTR2 1065 aa9.44□□□□□ -0.9
SYNE1-203ENST00000354674 VTCN1Q7Z7D3 282 aa9.44□□□□□ -0.9
SYNE1-203ENST00000354674 ANKRD46Q86W74 232 aa9.44□□□□□ -0.9
SYNE1-203ENST00000354674 C10orf111Q8N326 155 aa9.44□□□□□ -0.9
SYNE1-203ENST00000354674 Q8N402 240 aa9.44□□□□□ -0.9
SYNE1-203ENST00000354674 ARL14Q8N4G2 192 aa9.44□□□□□ -0.9
SYNE1-203ENST00000354674 ZNF565Q8N9K5 539 aa9.44□□□□□ -0.9
SYNE1-203ENST00000354674 SETD9Q8NE22 299 aa9.44□□□□□ -0.9
SYNE1-203ENST00000354674 GPR156Q8NFN8 814 aa9.44□□□□□ -0.9
SYNE1-203ENST00000354674 TEX47Q8TBZ9 253 aa9.44□□□□□ -0.9
SYNE1-203ENST00000354674 NETO1Q8TDF5 533 aa9.44□□□□□ -0.9
SYNE1-203ENST00000354674 TSPEARQ8WU66 669 aa9.44□□□□□ -0.9
SYNE1-203ENST00000354674 CHTF18Q8WVB6 975 aa9.44□□□□□ -0.9
SYNE1-203ENST00000354674 RELTQ969Z4 430 aa9.44□□□□□ -0.9
SYNE1-203ENST00000354674 CRELD1Q96HD1 420 aa9.44□□□□□ -0.9
SYNE1-203ENST00000354674 PRAP1Q96NZ9 151 aa9.44□□□□□ -0.9
SYNE1-203ENST00000354674 MTERF1Q99551 399 aaKnown RBP9.44□□□□□ -0.9
SYNE1-203ENST00000354674 ELF4Q99607 663 aaPredicted RBP9.44□□□□□ -0.9
SYNE1-203ENST00000354674 ZNF275Q9NSD4 429 aaPredicted RBP9.44□□□□□ -0.9
SYNE1-203ENST00000354674 PFDN2Q9UHV9 154 aa9.44□□□□□ -0.9
SYNE1-203ENST00000354674 KLHL21Q9UJP4 597 aa9.44□□□□□ -0.9
SYNE1-203ENST00000354674 ARHGEF17Q96PE2 2063 aaPredicted RBP9.44□□□□□ -0.9
SYNE1-203ENST00000354674 hCG_1807616A0A1W2PRN6 198 aa9.44□□□□□ -0.9
SYNE1-203ENST00000354674 TRBC2A0A5B9 178 aa9.44□□□□□ -0.9
SYNE1-203ENST00000354674 B4DGG1 531 aa9.44□□□□□ -0.9
SYNE1-203ENST00000354674 IFNA7P01567 189 aa9.44□□□□□ -0.9
SYNE1-203ENST00000354674 C9P02748 559 aa9.44□□□□□ -0.9
SYNE1-203ENST00000354674 LPLP06858 475 aa9.44□□□□□ -0.9
SYNE1-203ENST00000354674 ADRA2AP08913 450 aa9.44□□□□□ -0.9
SYNE1-203ENST00000354674 CMPK1P30085 196 aa9.44□□□□□ -0.9
SYNE1-203ENST00000354674 KIAA1614Q5VZ46 1190 aa9.44□□□□□ -0.9
SYNE1-203ENST00000354674 PYHIN1Q6K0P9 492 aa9.44□□□□□ -0.9
SYNE1-203ENST00000354674 KRT74Q7RTS7 529 aa9.44□□□□□ -0.9
SYNE1-203ENST00000354674 ADGRG3Q86Y34 549 aa9.44□□□□□ -0.9
SYNE1-203ENST00000354674 SLC25A45Q8N413 288 aa9.44□□□□□ -0.9
SYNE1-203ENST00000354674 CLRN3Q8NCR9 226 aa9.44□□□□□ -0.9
SYNE1-203ENST00000354674 OR9Q1Q8NGQ5 310 aa9.44□□□□□ -0.9
SYNE1-203ENST00000354674 GGHQ92820 318 aa9.44□□□□□ -0.9
SYNE1-203ENST00000354674 APIPQ96GX9 242 aa9.44□□□□□ -0.9
SYNE1-203ENST00000354674 MGLLQ99685 303 aa9.44□□□□□ -0.9
SYNE1-203ENST00000354674 SHARPINQ9H0F6 387 aa9.44□□□□□ -0.9
SYNE1-203ENST00000354674 PCDHGB3Q9Y5G1 929 aa9.44□□□□□ -0.9
SYNE1-203ENST00000354674 TMEM131Q92545 1883 aa9.43□□□□□ -0.9
SYNE1-203ENST00000354674 A0A1B0GV90 55 aa9.43□□□□□ -0.9
SYNE1-203ENST00000354674 GSAPA4D1B5 854 aa9.43□□□□□ -0.9
SYNE1-203ENST00000354674 SLC35F4A4IF30 521 aa9.43□□□□□ -0.9
SYNE1-203ENST00000354674 PDCD5O14737 125 aa9.43□□□□□ -0.9
SYNE1-203ENST00000354674 SEC22BO75396 215 aa9.43□□□□□ -0.9
SYNE1-203ENST00000354674 G6PDP11413 515 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms