RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 TTTY10Q9BZA0 68 aa18.23■□□□□ 0.51
COL13A1-201ENST00000354547 MCOLN1Q9GZU1 580 aa18.23■□□□□ 0.51
COL13A1-201ENST00000354547 CD93Q9NPY3 652 aa18.23■□□□□ 0.51
COL13A1-201ENST00000354547 C20orf141Q9NUB4 165 aa18.23■□□□□ 0.51
COL13A1-201ENST00000354547 IL20Q9NYY1 176 aa18.23■□□□□ 0.51
COL13A1-201ENST00000354547 IRGMA1A4Y4 181 aa18.23■□□□□ 0.51
COL13A1-201ENST00000354547 C12orf71A8MTZ7 269 aa18.23■□□□□ 0.51
COL13A1-201ENST00000354547 GPR89AB7ZAQ6 455 aa18.23■□□□□ 0.51
COL13A1-201ENST00000354547 AKAP8O43823 692 aaKnown RBP18.23■□□□□ 0.51
COL13A1-201ENST00000354547 GPR89BP0CG08 455 aa18.23■□□□□ 0.51
COL13A1-201ENST00000354547 NDUFV2P19404 249 aa18.23■□□□□ 0.51
COL13A1-201ENST00000354547 FPR3P25089 353 aa18.23■□□□□ 0.51
COL13A1-201ENST00000354547 STAT5AP42229 794 aa18.23■□□□□ 0.51
COL13A1-201ENST00000354547 RGS1Q08116 209 aa18.23■□□□□ 0.51
COL13A1-201ENST00000354547 ZNF628Q5EBL2 1059 aa18.23■□□□□ 0.51
COL13A1-201ENST00000354547 IL20RBQ6UXL0 311 aa18.23■□□□□ 0.51
COL13A1-201ENST00000354547 MBOAT2Q6ZWT7 520 aa18.23■□□□□ 0.51
COL13A1-201ENST00000354547 ASPGQ86U10 573 aa18.23■□□□□ 0.51
COL13A1-201ENST00000354547 FRMD6Q96NE9 622 aa18.23■□□□□ 0.51
COL13A1-201ENST00000354547 HCAR1Q9BXC0 346 aa18.23■□□□□ 0.51
COL13A1-201ENST00000354547 OR51V1Q9H2C8 321 aa18.23■□□□□ 0.51
COL13A1-201ENST00000354547 UBQLN3Q9H347 655 aa18.23■□□□□ 0.51
COL13A1-201ENST00000354547 COLEC10Q9Y6Z7 277 aa18.23■□□□□ 0.51
COL13A1-201ENST00000354547 PEX12O00623 359 aa18.23■□□□□ 0.51
COL13A1-201ENST00000354547 POLR2CP19387 275 aaPredicted RBP18.23■□□□□ 0.51
COL13A1-201ENST00000354547 PAICSP22234 425 aaKnown RBP18.23■□□□□ 0.51
COL13A1-201ENST00000354547 PRKAR1BP31321 381 aa18.23■□□□□ 0.51
COL13A1-201ENST00000354547 RUNX2Q13950 521 aa18.23■□□□□ 0.51
COL13A1-201ENST00000354547 QPRTQ15274 297 aa18.23■□□□□ 0.51
COL13A1-201ENST00000354547 DECR1Q16698 335 aa18.23■□□□□ 0.51
COL13A1-201ENST00000354547 LCN1P1Q5VSP4 162 aa18.23■□□□□ 0.51
COL13A1-201ENST00000354547 ZNF776Q68DI1 518 aaPredicted RBP18.23■□□□□ 0.51
COL13A1-201ENST00000354547 ZNF425Q6IV72 752 aa18.23■□□□□ 0.51
COL13A1-201ENST00000354547 PRSS41Q7RTY9 318 aa18.23■□□□□ 0.51
COL13A1-201ENST00000354547 POGLUT1Q8NBL1 392 aa18.23■□□□□ 0.51
COL13A1-201ENST00000354547 C7orf57Q8NEG2 295 aa18.23■□□□□ 0.51
COL13A1-201ENST00000354547 OR4K14Q8NGD5 310 aa18.23■□□□□ 0.51
COL13A1-201ENST00000354547 SENP5Q96HI0 755 aaPredicted RBP18.23■□□□□ 0.51
COL13A1-201ENST00000354547 B3GAT2Q9NPZ5 323 aa18.23■□□□□ 0.51
COL13A1-201ENST00000354547 NLKQ9UBE8 527 aa18.23■□□□□ 0.51
COL13A1-201ENST00000354547 PRSS38A1L453 326 aa18.22■□□□□ 0.51
COL13A1-201ENST00000354547 HLA-DPB1P04440 258 aa18.22■□□□□ 0.51
COL13A1-201ENST00000354547 ACTR1BP42025 376 aa18.22■□□□□ 0.51
COL13A1-201ENST00000354547 INPP1P49441 399 aa18.22■□□□□ 0.51
COL13A1-201ENST00000354547 ACTR1AP61163 376 aa18.22■□□□□ 0.51
COL13A1-201ENST00000354547 CSTF1Q05048 431 aaKnown RBP18.22■□□□□ 0.51
COL13A1-201ENST00000354547 IDNKQ5T6J7 187 aa18.22■□□□□ 0.51
COL13A1-201ENST00000354547 ZC3H14Q6PJT7 736 aaKnown RBP18.22■□□□□ 0.51
COL13A1-201ENST00000354547 VWA5B2Q8N398 1253 aa18.22■□□□□ 0.51
COL13A1-201ENST00000354547 ZNF485Q8NCK3 441 aa18.22■□□□□ 0.51
COL13A1-201ENST00000354547 C10orf90Q96M02 699 aa18.22■□□□□ 0.51
COL13A1-201ENST00000354547 NECTIN4Q96NY8 510 aa18.22■□□□□ 0.51
COL13A1-201ENST00000354547 ATF6BQ99941 703 aa18.22■□□□□ 0.51
COL13A1-201ENST00000354547 MTHFD2LQ9H903 347 aaPredicted RBP18.22■□□□□ 0.51
COL13A1-201ENST00000354547 RNF121Q9H920 327 aa18.22■□□□□ 0.51
COL13A1-201ENST00000354547 NPAP1Q9NZP6 1156 aa18.22■□□□□ 0.51
COL13A1-201ENST00000354547 ARHGEF17Q96PE2 2063 aaPredicted RBP18.22■□□□□ 0.51
COL13A1-201ENST00000354547 TRDV1A0A1B0GX56 115 aa18.22■□□□□ 0.51
COL13A1-201ENST00000354547 FAM47E-STBD1D6RA91 191 aa18.22■□□□□ 0.51
COL13A1-201ENST00000354547 CTSVO60911 334 aa18.22■□□□□ 0.51
COL13A1-201ENST00000354547 SLC35G6P0C7Q6 338 aa18.22■□□□□ 0.51
COL13A1-201ENST00000354547 DUSP6Q16828 381 aa18.22■□□□□ 0.51
COL13A1-201ENST00000354547 FAM27D1Q5T7N8 215 aa18.22■□□□□ 0.51
COL13A1-201ENST00000354547 FBXO42Q6P3S6 717 aa18.22■□□□□ 0.51
COL13A1-201ENST00000354547 PLET1Q6UQ28 207 aa18.22■□□□□ 0.51
COL13A1-201ENST00000354547 WDR88Q6ZMY6 472 aa18.22■□□□□ 0.51
COL13A1-201ENST00000354547 MRGPREQ86SM8 312 aa18.22■□□□□ 0.51
COL13A1-201ENST00000354547 TMEM99Q8N816 258 aa18.22■□□□□ 0.51
COL13A1-201ENST00000354547 OR10H4Q8NGA5 316 aa18.22■□□□□ 0.51
COL13A1-201ENST00000354547 OR1E3Q8WZA6 343 aa18.22■□□□□ 0.51
COL13A1-201ENST00000354547 MS4A4EQ96PG1 132 aa18.22■□□□□ 0.51
COL13A1-201ENST00000354547 GFM1Q96RP9 751 aaKnown RBP18.22■□□□□ 0.51
COL13A1-201ENST00000354547 OR2B2Q9GZK3 357 aa18.22■□□□□ 0.51
COL13A1-201ENST00000354547 OR52D1Q9H346 318 aa18.22■□□□□ 0.51
COL13A1-201ENST00000354547 SIRT4Q9Y6E7 314 aaPredicted RBP18.22■□□□□ 0.51
COL13A1-201ENST00000354547 LOC105369274A0A096LPK9 316 aa18.21■□□□□ 0.51
COL13A1-201ENST00000354547 LOC102723532A0A0G2JNH3 316 aa18.21■□□□□ 0.51
COL13A1-201ENST00000354547 DUXAA6NLW8 204 aa18.21■□□□□ 0.51
COL13A1-201ENST00000354547 IFI30P13284 250 aa18.21■□□□□ 0.51
COL13A1-201ENST00000354547 PVRP15151 417 aa18.21■□□□□ 0.51
COL13A1-201ENST00000354547 OR4N4Q8N0Y3 316 aa18.21■□□□□ 0.51
COL13A1-201ENST00000354547 GJD3Q8N144 294 aa18.21■□□□□ 0.51
COL13A1-201ENST00000354547 TMEM246Q9BRR3 403 aa18.21■□□□□ 0.51
COL13A1-201ENST00000354547 ZNF624Q9P2J8 865 aaPredicted RBP18.21■□□□□ 0.51
COL13A1-201ENST00000354547 MRPS2Q9Y399 296 aaKnown RBP18.21■□□□□ 0.51
COL13A1-201ENST00000354547 TRIOO75962 3097 aa18.21■□□□□ 0.51
COL13A1-201ENST00000354547 HMX3A6NHT5 357 aa18.21■□□□□ 0.51
COL13A1-201ENST00000354547 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.21■□□□□ 0.51
COL13A1-201ENST00000354547 ZGLP1P0C6A0 271 aa18.21■□□□□ 0.51
COL13A1-201ENST00000354547 SPTBP11277 2137 aa18.21■□□□□ 0.51
COL13A1-201ENST00000354547 MAKP20794 623 aa18.21■□□□□ 0.51
COL13A1-201ENST00000354547 EXOSC7Q15024 291 aaKnown RBP18.21■□□□□ 0.51
COL13A1-201ENST00000354547 ZNF57Q68EA5 555 aaPredicted RBP18.21■□□□□ 0.51
COL13A1-201ENST00000354547 CDC73Q6P1J9 531 aa18.21■□□□□ 0.51
COL13A1-201ENST00000354547 PARM1Q6UWI2 310 aa18.21■□□□□ 0.51
COL13A1-201ENST00000354547 PAQR7Q86WK9 346 aa18.21■□□□□ 0.51
COL13A1-201ENST00000354547 CYB561A3Q8NBI2 242 aa18.21■□□□□ 0.51
COL13A1-201ENST00000354547 OR51A7Q8NH64 312 aa18.21■□□□□ 0.51
COL13A1-201ENST00000354547 GRHL3Q8TE85 626 aa18.21■□□□□ 0.51
COL13A1-201ENST00000354547 FGF14Q92915 247 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms