RNA–Protein interactions for RNA: ENST00000353047.10

CTSB-202, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 3,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-202ENST00000353047 BLOC1S5-TXNDC5H3BN57 136 aa16.9■□□□□ 0.3
CTSB-202ENST00000353047 SEMA7AO75326 666 aa16.9■□□□□ 0.3
CTSB-202ENST00000353047 TP53P04637 393 aaPredicted RBP16.9■□□□□ 0.3
CTSB-202ENST00000353047 ACVR2AP27037 513 aa16.9■□□□□ 0.3
CTSB-202ENST00000353047 ETV6P41212 452 aa16.9■□□□□ 0.3
CTSB-202ENST00000353047 RPS5P46782 204 aaKnown RBP16.9■□□□□ 0.3
CTSB-202ENST00000353047 RAB40BQ12829 278 aa16.9■□□□□ 0.3
CTSB-202ENST00000353047 BTN1A1Q13410 526 aa16.9■□□□□ 0.3
CTSB-202ENST00000353047 NDUFAF6Q330K2 333 aa16.9■□□□□ 0.3
CTSB-202ENST00000353047 HDDC2Q7Z4H3 204 aa16.9■□□□□ 0.3
CTSB-202ENST00000353047 HDDC3Q8N4P3 179 aa16.9■□□□□ 0.3
CTSB-202ENST00000353047 METTL27Q8N6F8 245 aaPredicted RBP16.9■□□□□ 0.3
CTSB-202ENST00000353047 OR52E2Q8NGJ4 325 aa16.9■□□□□ 0.3
CTSB-202ENST00000353047 POLDIP3Q9BY77 421 aaKnown RBP16.9■□□□□ 0.3
CTSB-202ENST00000353047 CHST8Q9H2A9 424 aa16.9■□□□□ 0.3
CTSB-202ENST00000353047 OR52D1Q9H346 318 aa16.9■□□□□ 0.3
CTSB-202ENST00000353047 REV1Q9UBZ9 1251 aa16.9■□□□□ 0.3
CTSB-202ENST00000353047 OR10H1Q9Y4A9 318 aa16.9■□□□□ 0.3
CTSB-202ENST00000353047 FKBP7Q9Y680 259 aa16.9■□□□□ 0.3
CTSB-202ENST00000353047 EIF4EP06730 217 aaKnown RBP16.9■□□□□ 0.3
CTSB-202ENST00000353047 DGCR2P98153 550 aa16.9■□□□□ 0.3
CTSB-202ENST00000353047 ZNF155Q12901 538 aaPredicted RBP16.9■□□□□ 0.3
CTSB-202ENST00000353047 TMED4Q7Z7H5 227 aa16.9■□□□□ 0.3
CTSB-202ENST00000353047 ADIPOR2Q86V24 386 aa16.9■□□□□ 0.3
CTSB-202ENST00000353047 ZNF527Q8NB42 609 aa16.9■□□□□ 0.3
CTSB-202ENST00000353047 SUN3Q8TAQ9 357 aa16.9■□□□□ 0.3
CTSB-202ENST00000353047 DTD2Q96FN9 168 aa16.9■□□□□ 0.3
CTSB-202ENST00000353047 AMDHD1Q96NU7 426 aa16.9■□□□□ 0.3
CTSB-202ENST00000353047 OR7D2Q96RA2 312 aa16.9■□□□□ 0.3
CTSB-202ENST00000353047 PDCD1LG2Q9BQ51 273 aa16.9■□□□□ 0.3
CTSB-202ENST00000353047 WDR26Q9H7D7 661 aa16.9■□□□□ 0.3
CTSB-202ENST00000353047 SYNPO2LQ9H987 977 aa16.9■□□□□ 0.3
CTSB-202ENST00000353047 CACNG2Q9Y698 323 aa16.9■□□□□ 0.3
CTSB-202ENST00000353047 A0A0B4J293 547 aa16.89■□□□□ 0.29
CTSB-202ENST00000353047 DOK2O60496 412 aa16.89■□□□□ 0.29
CTSB-202ENST00000353047 SIX6O95475 246 aa16.89■□□□□ 0.29
CTSB-202ENST00000353047 H2AFB2P0C5Z0 115 aa16.89■□□□□ 0.29
CTSB-202ENST00000353047 LIMS3P0CW19 117 aa16.89■□□□□ 0.29
CTSB-202ENST00000353047 LIMS4P0CW20 117 aa16.89■□□□□ 0.29
CTSB-202ENST00000353047 LIPCP11150 499 aa16.89■□□□□ 0.29
CTSB-202ENST00000353047 ZNF250P15622 560 aa16.89■□□□□ 0.29
CTSB-202ENST00000353047 LAG3P18627 525 aa16.89■□□□□ 0.29
CTSB-202ENST00000353047 GABRA5P31644 462 aa16.89■□□□□ 0.29
CTSB-202ENST00000353047 PITPNBP48739 271 aa16.89■□□□□ 0.29
CTSB-202ENST00000353047 PDX1P52945 283 aa16.89■□□□□ 0.29
CTSB-202ENST00000353047 SLC25A35Q3KQZ1 300 aa16.89■□□□□ 0.29
CTSB-202ENST00000353047 ACSM3Q53FZ2 586 aa16.89■□□□□ 0.29
CTSB-202ENST00000353047 OAFQ86UD1 273 aa16.89■□□□□ 0.29
CTSB-202ENST00000353047 PRSS58Q8IYP2 241 aa16.89■□□□□ 0.29
CTSB-202ENST00000353047 PFN4Q8NHR9 129 aa16.89■□□□□ 0.29
CTSB-202ENST00000353047 NXPE3Q969Y0 559 aa16.89■□□□□ 0.29
CTSB-202ENST00000353047 PRRC1Q96M27 445 aa16.89■□□□□ 0.29
CTSB-202ENST00000353047 CA5BQ9Y2D0 317 aa16.89■□□□□ 0.29
CTSB-202ENST00000353047 LRRN3E7EW58 273 aa16.89■□□□□ 0.29
CTSB-202ENST00000353047 EFCAB14O75071 495 aa16.89■□□□□ 0.29
CTSB-202ENST00000353047 ZNF542PQ5EBM4 170 aa16.89■□□□□ 0.29
CTSB-202ENST00000353047 ALKAL2Q6UX46 152 aa16.89■□□□□ 0.29
CTSB-202ENST00000353047 RPLP0P6Q8NHW5 317 aa16.89■□□□□ 0.29
CTSB-202ENST00000353047 CXorf40BQ96DE9 158 aa16.89■□□□□ 0.29
CTSB-202ENST00000353047 ELMOD3Q96FG2 381 aa16.89■□□□□ 0.29
CTSB-202ENST00000353047 LRRN3Q9H3W5 708 aa16.89■□□□□ 0.29
CTSB-202ENST00000353047 PRKAG2Q9UGJ0 569 aa16.89■□□□□ 0.29
CTSB-202ENST00000353047 PLATP00750 562 aa16.89■□□□□ 0.29
CTSB-202ENST00000353047 ADRB3P13945 408 aa16.89■□□□□ 0.29
CTSB-202ENST00000353047 EPCAMP16422 314 aa16.89■□□□□ 0.29
CTSB-202ENST00000353047 PTPN2P17706 415 aa16.89■□□□□ 0.29
CTSB-202ENST00000353047 E2F1Q01094 437 aa16.89■□□□□ 0.29
CTSB-202ENST00000353047 DEFA5Q01523 94 aa16.89■□□□□ 0.29
CTSB-202ENST00000353047 EXOSC7Q15024 291 aaKnown RBP16.89■□□□□ 0.29
CTSB-202ENST00000353047 SF3A2Q15428 464 aaKnown RBP16.89■□□□□ 0.29
CTSB-202ENST00000353047 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.89■□□□□ 0.299e-9■■□□□ 14.4
CTSB-202ENST00000353047 SIAH3Q8IW03 269 aa16.89■□□□□ 0.29
CTSB-202ENST00000353047 LAS2Q8IYD9 372 aa16.89■□□□□ 0.29
CTSB-202ENST00000353047 LSM14AQ8ND56 463 aaKnown RBP16.89■□□□□ 0.29
CTSB-202ENST00000353047 PTCHD1Q96NR3 888 aa16.89■□□□□ 0.29
CTSB-202ENST00000353047 ZDHHC5Q9C0B5 715 aa16.89■□□□□ 0.29
CTSB-202ENST00000353047 MGAT4CQ9UBM8 478 aa16.89■□□□□ 0.29
CTSB-202ENST00000353047 RCE1Q9Y256 329 aa16.89■□□□□ 0.29
CTSB-202ENST00000353047 PCYT1BQ9Y5K3 369 aaPredicted RBP16.89■□□□□ 0.29
CTSB-202ENST00000353047 ANKRD36A6QL64 1941 aa16.89■□□□□ 0.29
CTSB-202ENST00000353047 TMEM229AB2RXF0 380 aa16.88■□□□□ 0.29
CTSB-202ENST00000353047 MT-ND5P03915 603 aa16.88■□□□□ 0.29
CTSB-202ENST00000353047 IFNA16P05015 189 aa16.88■□□□□ 0.29
CTSB-202ENST00000353047 SNRPGP62308 76 aaKnown RBP16.88■□□□□ 0.29
CTSB-202ENST00000353047 SNTA1Q13424 505 aa16.88■□□□□ 0.29
CTSB-202ENST00000353047 FGL2Q14314 439 aa16.88■□□□□ 0.29
CTSB-202ENST00000353047 AGERQ15109 404 aa16.88■□□□□ 0.29
CTSB-202ENST00000353047 SLC39A11Q8N1S5 342 aa16.88■□□□□ 0.29
CTSB-202ENST00000353047 GIMAP1Q8WWP7 306 aa16.88■□□□□ 0.29
CTSB-202ENST00000353047 GON7Q9BXV9 100 aa16.88■□□□□ 0.29
CTSB-202ENST00000353047 NARFLQ9H6Q4 476 aa16.88■□□□□ 0.29
CTSB-202ENST00000353047 ARPC5O15511 151 aa16.88■□□□□ 0.29
CTSB-202ENST00000353047 RFPL3O75679 317 aa16.88■□□□□ 0.29
CTSB-202ENST00000353047 ACADLP28330 430 aa16.88■□□□□ 0.29
CTSB-202ENST00000353047 RPS27P42677 84 aaKnown RBP16.88■□□□□ 0.29
CTSB-202ENST00000353047 CAMK2BQ13554 666 aa16.88■□□□□ 0.29
CTSB-202ENST00000353047 NDUFA9Q16795 377 aa16.88■□□□□ 0.29
CTSB-202ENST00000353047 CLDN22Q8N7P3 220 aa16.88■□□□□ 0.29
CTSB-202ENST00000353047 ARRDC3Q96B67 414 aa16.88■□□□□ 0.29
CTSB-202ENST00000353047 CPEB1Q9BZB8 566 aaKnown RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms