RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 MFSD12Q6NUT3 480 aa22.86■■□□□ 1.25
CPNE1-202ENST00000352393 ZNF836Q6ZNA1 936 aa22.86■■□□□ 1.25
CPNE1-202ENST00000352393 NRROSQ86YC3 692 aa22.86■■□□□ 1.25
CPNE1-202ENST00000352393 ACBD7Q8N6N7 88 aa22.86■■□□□ 1.25
CPNE1-202ENST00000352393 SRFBP1Q8NEF9 429 aaKnown RBP22.86■■□□□ 1.25
CPNE1-202ENST00000352393 ADAMTS15Q8TE58 950 aa22.86■■□□□ 1.25
CPNE1-202ENST00000352393 DEDD2Q8WXF8 326 aa22.86■■□□□ 1.25
CPNE1-202ENST00000352393 AKAP1Q92667 903 aaKnown RBP eCLIP22.86■■□□□ 1.25
CPNE1-202ENST00000352393 TRIM43Q96BQ3 446 aaPredicted RBP22.86■■□□□ 1.25
CPNE1-202ENST00000352393 TIMM29Q9BSF4 260 aa22.86■■□□□ 1.25
CPNE1-202ENST00000352393 ALG8Q9BVK2 526 aa22.86■■□□□ 1.25
CPNE1-202ENST00000352393 C6orf106Q9H6K1 298 aaPredicted RBP22.86■■□□□ 1.25
CPNE1-202ENST00000352393 ZFR2Q9UPR6 939 aaKnown RBP22.86■■□□□ 1.25
CPNE1-202ENST00000352393 ZNF780BQ9Y6R6 833 aa22.86■■□□□ 1.25
CPNE1-202ENST00000352393 SLC6A1P30531 599 aa22.85■■□□□ 1.25
CPNE1-202ENST00000352393 GPR176Q14439 515 aa22.85■■□□□ 1.25
CPNE1-202ENST00000352393 IRF4Q15306 451 aa22.85■■□□□ 1.25
CPNE1-202ENST00000352393 AGBL4Q5VU57 503 aa22.85■■□□□ 1.25
CPNE1-202ENST00000352393 PLBD1Q6P4A8 553 aa22.85■■□□□ 1.25
CPNE1-202ENST00000352393 LRRC28Q86X40 367 aaPredicted RBP22.85■■□□□ 1.25
CPNE1-202ENST00000352393 TMEM99Q8N816 258 aa22.85■■□□□ 1.25
CPNE1-202ENST00000352393 MFSD9Q8NBP5 474 aa22.85■■□□□ 1.25
CPNE1-202ENST00000352393 GFM1Q96RP9 751 aaKnown RBP22.85■■□□□ 1.25
CPNE1-202ENST00000352393 BABAM2Q9NXR7 383 aa22.85■■□□□ 1.25
CPNE1-202ENST00000352393 EVI2BP34910 448 aa22.85■■□□□ 1.25
CPNE1-202ENST00000352393 THBS2P35442 1172 aa22.85■■□□□ 1.25
CPNE1-202ENST00000352393 ATP12AP54707 1039 aa22.85■■□□□ 1.25
CPNE1-202ENST00000352393 BTG1P62324 171 aa22.85■■□□□ 1.25
CPNE1-202ENST00000352393 SLC16A11Q8NCK7 471 aa22.85■■□□□ 1.25
CPNE1-202ENST00000352393 CDS1Q92903 461 aa22.85■■□□□ 1.25
CPNE1-202ENST00000352393 NECTIN4Q96NY8 510 aa22.85■■□□□ 1.25
CPNE1-202ENST00000352393 MS4A4EQ96PG1 132 aa22.85■■□□□ 1.25
CPNE1-202ENST00000352393 FN3KQ9H479 309 aa22.85■■□□□ 1.25
CPNE1-202ENST00000352393 SLC28A3Q9HAS3 691 aa22.85■■□□□ 1.25
CPNE1-202ENST00000352393 TRPV5Q9NQA5 729 aa22.85■■□□□ 1.25
CPNE1-202ENST00000352393 LYARQ9NX58 379 aaKnown RBP22.85■■□□□ 1.25
CPNE1-202ENST00000352393 HRO43593 1189 aa22.84■■□□□ 1.25
CPNE1-202ENST00000352393 PCDH8O95206 1070 aa22.84■■□□□ 1.25
CPNE1-202ENST00000352393 HK1P19367 917 aa22.84■■□□□ 1.25
CPNE1-202ENST00000352393 PTNP21246 168 aa22.84■■□□□ 1.25
CPNE1-202ENST00000352393 CTNNB1P35222 781 aa22.84■■□□□ 1.25
CPNE1-202ENST00000352393 ZNF136P52737 540 aa22.84■■□□□ 1.25
CPNE1-202ENST00000352393 FXYD6P3P58550 94 aa22.84■■□□□ 1.25
CPNE1-202ENST00000352393 AGERQ15109 404 aa22.84■■□□□ 1.25
CPNE1-202ENST00000352393 CDC73Q6P1J9 531 aa22.84■■□□□ 1.25
CPNE1-202ENST00000352393 OR7G2Q8NG99 324 aa22.84■■□□□ 1.25
CPNE1-202ENST00000352393 KCTD12Q96CX2 325 aaKnown RBP22.84■■□□□ 1.25
CPNE1-202ENST00000352393 C10orf90Q96M02 699 aa22.84■■□□□ 1.25
CPNE1-202ENST00000352393 HDHD2Q9H0R4 259 aa22.84■■□□□ 1.25
CPNE1-202ENST00000352393 OR52D1Q9H346 318 aa22.84■■□□□ 1.25
CPNE1-202ENST00000352393 KRCC1Q9NPI7 259 aaPredicted RBP22.84■■□□□ 1.25
CPNE1-202ENST00000352393 SPHK1Q9NYA1 384 aa22.84■■□□□ 1.25
CPNE1-202ENST00000352393 NTMQ9P121 344 aa22.84■■□□□ 1.25
CPNE1-202ENST00000352393 PRR19A6NJB7 356 aa22.84■■□□□ 1.25
CPNE1-202ENST00000352393 DUXAA6NLW8 204 aa22.84■■□□□ 1.25
CPNE1-202ENST00000352393 OR52A4PA6NMU1 304 aa22.84■■□□□ 1.25
CPNE1-202ENST00000352393 SMLR1H3BR10 107 aa22.84■■□□□ 1.25
CPNE1-202ENST00000352393 AKR7A2O43488 359 aa22.84■■□□□ 1.25
CPNE1-202ENST00000352393 NDUFB5O43674 189 aa22.84■■□□□ 1.25
CPNE1-202ENST00000352393 LANCL1O43813 399 aa22.84■■□□□ 1.25
CPNE1-202ENST00000352393 TFPIP10646 304 aa22.84■■□□□ 1.25
CPNE1-202ENST00000352393 PAICSP22234 425 aaKnown RBP22.84■■□□□ 1.25
CPNE1-202ENST00000352393 TEAD1P28347 426 aa22.84■■□□□ 1.25
CPNE1-202ENST00000352393 RAB25P57735 213 aa22.84■■□□□ 1.25
CPNE1-202ENST00000352393 C19orf57Q0VDD7 668 aa22.84■■□□□ 1.25
CPNE1-202ENST00000352393 PLA1AQ53H76 456 aa22.84■■□□□ 1.25
CPNE1-202ENST00000352393 MEPCEQ7L2J0 689 aaKnown RBP22.84■■□□□ 1.25
CPNE1-202ENST00000352393 CACUL1Q86Y37 369 aa22.84■■□□□ 1.25
CPNE1-202ENST00000352393 OR4M1Q8NGD0 313 aa22.84■■□□□ 1.25
CPNE1-202ENST00000352393 SPPL3Q8TCT6 385 aa22.84■■□□□ 1.25
CPNE1-202ENST00000352393 ZFPM2Q8WW38 1151 aa22.84■■□□□ 1.25
CPNE1-202ENST00000352393 KISS1RQ969F8 398 aaPredicted RBP22.84■■□□□ 1.25
CPNE1-202ENST00000352393 PRSS27Q9BQR3 290 aa22.84■■□□□ 1.25
CPNE1-202ENST00000352393 C1QTNF2Q9BXJ5 285 aa22.84■■□□□ 1.25
CPNE1-202ENST00000352393 ZNF223Q9UK11 482 aaPredicted RBP22.84■■□□□ 1.25
CPNE1-202ENST00000352393 PLEKHM1Q9Y4G2 1056 aa22.84■■□□□ 1.25
CPNE1-202ENST00000352393 GOLGA4Q13439 2230 aaKnown RBP22.83■■□□□ 1.25
CPNE1-202ENST00000352393 ZC3H12DA2A288 527 aaKnown RBP22.83■■□□□ 1.25
CPNE1-202ENST00000352393 UNC119BA6NIH7 251 aa22.83■■□□□ 1.25
CPNE1-202ENST00000352393 OR2B3O76000 313 aa22.83■■□□□ 1.25
CPNE1-202ENST00000352393 PAHP00439 452 aa22.83■■□□□ 1.25
CPNE1-202ENST00000352393 EIF4EP06730 217 aaKnown RBP22.83■■□□□ 1.25
CPNE1-202ENST00000352393 RBMS1P29558 406 aaKnown RBP22.83■■□□□ 1.25
CPNE1-202ENST00000352393 LRRC32Q14392 662 aa22.83■■□□□ 1.25
CPNE1-202ENST00000352393 ZNF425Q6IV72 752 aa22.83■■□□□ 1.25
CPNE1-202ENST00000352393 LYPD8Q6UX82 237 aa22.83■■□□□ 1.25
CPNE1-202ENST00000352393 LSRQ86X29 649 aaPredicted RBP22.83■■□□□ 1.25
CPNE1-202ENST00000352393 SLC37A3Q8NCC5 494 aa22.83■■□□□ 1.25
CPNE1-202ENST00000352393 FANK1Q8TC84 345 aa22.83■■□□□ 1.25
CPNE1-202ENST00000352393 SNAPC3Q92966 411 aa22.83■■□□□ 1.25
CPNE1-202ENST00000352393 PPIL3Q9H2H8 161 aaKnown RBP22.83■■□□□ 1.25
CPNE1-202ENST00000352393 MTHFD2LQ9H903 347 aaPredicted RBP22.83■■□□□ 1.25
CPNE1-202ENST00000352393 MED20Q9H944 212 aa22.83■■□□□ 1.25
CPNE1-202ENST00000352393 INSL6Q9Y581 213 aa22.83■■□□□ 1.25
CPNE1-202ENST00000352393 BHLHE40O14503 412 aa22.82■■□□□ 1.24
CPNE1-202ENST00000352393 ASGR2P07307 311 aa22.82■■□□□ 1.24
CPNE1-202ENST00000352393 SHC2P98077 582 aa22.82■■□□□ 1.24
CPNE1-202ENST00000352393 KRT33BQ14525 404 aa22.82■■□□□ 1.24
CPNE1-202ENST00000352393 CREB3L2Q70SY1 520 aa22.82■■□□□ 1.24
CPNE1-202ENST00000352393 RFT1Q96AA3 541 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms