RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 ATP6V1C1P21283 382 aa20.05■□□□□ 0.8
SNX3-202ENST00000349379 PTGER4P35408 488 aa20.05■□□□□ 0.8
SNX3-202ENST00000349379 ATP4BP51164 291 aa20.05■□□□□ 0.8
SNX3-202ENST00000349379 B3GALT5-AS1P59052 145 aa20.05■□□□□ 0.8
SNX3-202ENST00000349379 STX1BP61266 288 aa20.05■□□□□ 0.8
SNX3-202ENST00000349379 RCAN2Q14206 197 aa20.05■□□□□ 0.8
SNX3-202ENST00000349379 ARHGAP11BQ3KRB8 267 aa20.05■□□□□ 0.8
SNX3-202ENST00000349379 HSP90B2PQ58FF3 399 aa20.05■□□□□ 0.8
SNX3-202ENST00000349379 IFNEQ86WN2 208 aa20.05■□□□□ 0.8
SNX3-202ENST00000349379 ULK2Q8IYT8 1036 aa20.05■□□□□ 0.8
SNX3-202ENST00000349379 TRIML2Q8N7C3 387 aa20.05■□□□□ 0.8
SNX3-202ENST00000349379 OR14L1PQ8NHC6 308 aa20.05■□□□□ 0.8
SNX3-202ENST00000349379 ABTB1Q969K4 478 aaPredicted RBP20.05■□□□□ 0.8
SNX3-202ENST00000349379 WDYHV1Q96HA8 205 aa20.05■□□□□ 0.8
SNX3-202ENST00000349379 HOXD1Q9GZZ0 328 aa20.05■□□□□ 0.8
SNX3-202ENST00000349379 TMEM45AQ9NWC5 275 aa20.05■□□□□ 0.8
SNX3-202ENST00000349379 DKKL1Q9UK85 242 aa20.05■□□□□ 0.8
SNX3-202ENST00000349379 UTP20O75691 2785 aaKnown RBP20.05■□□□□ 0.8
SNX3-202ENST00000349379 AHRRA9YTQ3 701 aa20.04■□□□□ 0.8
SNX3-202ENST00000349379 SCDO00767 359 aa20.04■□□□□ 0.8
SNX3-202ENST00000349379 AGR2O95994 175 aa20.04■□□□□ 0.8
SNX3-202ENST00000349379 ZCCHC18P0CG32 403 aa20.04■□□□□ 0.8
SNX3-202ENST00000349379 OR12D1P0DN82 309 aa20.04■□□□□ 0.8
SNX3-202ENST00000349379 DCTP40126 519 aa20.04■□□□□ 0.8
SNX3-202ENST00000349379 ATP12AP54707 1039 aa20.04■□□□□ 0.8
SNX3-202ENST00000349379 NUP107P57740 925 aa20.04■□□□□ 0.8
SNX3-202ENST00000349379 FUT5Q11128 374 aa20.04■□□□□ 0.8
SNX3-202ENST00000349379 ART3Q13508 389 aa20.04■□□□□ 0.8
SNX3-202ENST00000349379 CDSNQ15517 529 aa20.04■□□□□ 0.8
SNX3-202ENST00000349379 CD226Q15762 336 aa20.04■□□□□ 0.8
SNX3-202ENST00000349379 TIGD2Q4W5G0 525 aa20.04■□□□□ 0.8
SNX3-202ENST00000349379 KLHL26Q53HC5 615 aa20.04■□□□□ 0.8
SNX3-202ENST00000349379 C1orf185Q5T7R7 199 aa20.04■□□□□ 0.8
SNX3-202ENST00000349379 B3GNT6Q6ZMB0 384 aa20.04■□□□□ 0.8
SNX3-202ENST00000349379 MED12LQ86YW9 2145 aa20.04■□□□□ 0.8
SNX3-202ENST00000349379 MISPQ8IVT2 679 aa20.04■□□□□ 0.8
SNX3-202ENST00000349379 PM20D2Q8IYS1 436 aa20.04■□□□□ 0.8
SNX3-202ENST00000349379 RFWD2Q8NHY2 731 aa20.04■□□□□ 0.8
SNX3-202ENST00000349379 ZFP90Q8TF47 636 aa20.04■□□□□ 0.8
SNX3-202ENST00000349379 C1GALT1C1Q96EU7 318 aa20.04■□□□□ 0.8
SNX3-202ENST00000349379 TTYH2Q9BSA4 534 aa20.04■□□□□ 0.8
SNX3-202ENST00000349379 ZNF350Q9GZX5 532 aa20.04■□□□□ 0.8
SNX3-202ENST00000349379 CCDC134Q9H6E4 229 aa20.04■□□□□ 0.8
SNX3-202ENST00000349379 PTGES2Q9H7Z7 377 aa20.04■□□□□ 0.8
SNX3-202ENST00000349379 SLC52A3Q9NQ40 469 aa20.04■□□□□ 0.8
SNX3-202ENST00000349379 SLC6A13Q9NSD5 602 aa20.04■□□□□ 0.8
SNX3-202ENST00000349379 EXD2Q9NVH0 621 aa20.04■□□□□ 0.8
SNX3-202ENST00000349379 INTS1Q8N201 2190 aaKnown RBP20.03■□□□□ 0.8
SNX3-202ENST00000349379 NPIPA5A0A0B4J1W7 369 aa20.03■□□□□ 0.8
SNX3-202ENST00000349379 NPIPA7E9PJI5 369 aa20.03■□□□□ 0.8
SNX3-202ENST00000349379 RFXANKO14593 260 aa20.03■□□□□ 0.8
SNX3-202ENST00000349379 GSNP06396 782 aa20.03■□□□□ 0.8
SNX3-202ENST00000349379 NPIPA8P0DM63 369 aa20.03■□□□□ 0.8
SNX3-202ENST00000349379 GLI4P10075 376 aa20.03■□□□□ 0.8
SNX3-202ENST00000349379 CPN1P15169 458 aa20.03■□□□□ 0.8
SNX3-202ENST00000349379 CHMP24386 653 aa20.03■□□□□ 0.8
SNX3-202ENST00000349379 MSX1P28360 303 aa20.03■□□□□ 0.8
SNX3-202ENST00000349379 CHI3L1P36222 383 aaPredicted RBP20.03■□□□□ 0.8
SNX3-202ENST00000349379 KHKP50053 298 aa20.03■□□□□ 0.8
SNX3-202ENST00000349379 CASP9P55211 416 aa20.03■□□□□ 0.8
SNX3-202ENST00000349379 TXNL4AP83876 142 aaKnown RBP20.03■□□□□ 0.8
SNX3-202ENST00000349379 FLYWCH1Q4VC44 716 aa20.03■□□□□ 0.8
SNX3-202ENST00000349379 DDX59Q5T1V6 619 aaKnown RBP eCLIP20.03■□□□□ 0.8
SNX3-202ENST00000349379 TNFAIP8L2Q6P589 184 aaPredicted RBP20.03■□□□□ 0.8
SNX3-202ENST00000349379 BLOC1S3Q6QNY0 202 aa20.03■□□□□ 0.8
SNX3-202ENST00000349379 ZNF621Q6ZSS3 439 aa20.03■□□□□ 0.8
SNX3-202ENST00000349379 RNF130Q86XS8 419 aa20.03■□□□□ 0.8
SNX3-202ENST00000349379 VPS33AQ96AX1 596 aa20.03■□□□□ 0.8
SNX3-202ENST00000349379 THOC1Q96FV9 657 aaKnown RBP20.03■□□□□ 0.8
SNX3-202ENST00000349379 NMUR2Q9GZQ4 415 aa20.03■□□□□ 0.8
SNX3-202ENST00000349379 ZNF385DQ9H6B1 395 aa20.03■□□□□ 0.8
SNX3-202ENST00000349379 RMND5AQ9H871 391 aa20.03■□□□□ 0.8
SNX3-202ENST00000349379 NPHS2Q9NP85 383 aa20.03■□□□□ 0.8
SNX3-202ENST00000349379 NBPF19A0A087WUL8 3843 aa20.02■□□□□ 0.8
SNX3-202ENST00000349379 PRAMEF27A3QJZ7 478 aa20.02■□□□□ 0.8
SNX3-202ENST00000349379 HMGN4O00479 90 aa20.02■□□□□ 0.8
SNX3-202ENST00000349379 HPGDP15428 266 aa20.02■□□□□ 0.8
SNX3-202ENST00000349379 HOXB9P17482 250 aaPredicted RBP20.02■□□□□ 0.8
SNX3-202ENST00000349379 GCKP35557 465 aa20.02■□□□□ 0.8
SNX3-202ENST00000349379 MAGEA8P43361 318 aa20.02■□□□□ 0.8
SNX3-202ENST00000349379 MVDP53602 400 aa20.02■□□□□ 0.8
SNX3-202ENST00000349379 SQLEQ14534 574 aa20.02■□□□□ 0.8
SNX3-202ENST00000349379 TMEM44Q2T9K0 475 aa20.02■□□□□ 0.8
SNX3-202ENST00000349379 GLYR1Q49A26 553 aaPredicted RBP20.02■□□□□ 0.8
SNX3-202ENST00000349379 ACSF3Q4G176 576 aaPredicted RBP20.02■□□□□ 0.8
SNX3-202ENST00000349379 SEM1Q6ZVN7 128 aa20.02■□□□□ 0.8
SNX3-202ENST00000349379 MTERF4Q7Z6M4 381 aaKnown RBP20.02■□□□□ 0.8
SNX3-202ENST00000349379 GATSQ8NAP1 163 aa20.02■□□□□ 0.8
SNX3-202ENST00000349379 ZNF527Q8NB42 609 aa20.02■□□□□ 0.8
SNX3-202ENST00000349379 GTF2H4Q92759 462 aa20.02■□□□□ 0.8
SNX3-202ENST00000349379 RAB8BQ92930 207 aa20.02■□□□□ 0.8
SNX3-202ENST00000349379 ITCHQ96J02 903 aa20.02■□□□□ 0.8
SNX3-202ENST00000349379 SFXN2Q96NB2 322 aa20.02■□□□□ 0.8
SNX3-202ENST00000349379 SAP130Q9H0E3 1048 aa20.02■□□□□ 0.8
SNX3-202ENST00000349379 DCTN4Q9UJW0 460 aa20.02■□□□□ 0.8
SNX3-202ENST00000349379 KLF2Q9Y5W3 355 aaPredicted RBP20.02■□□□□ 0.8
SNX3-202ENST00000349379 FCMRO60667 390 aa20.01■□□□□ 0.79
SNX3-202ENST00000349379 STX11O75558 287 aa20.01■□□□□ 0.79
SNX3-202ENST00000349379 HK1P19367 917 aa20.01■□□□□ 0.79
SNX3-202ENST00000349379 LHX2P50458 406 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 186 ms