RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 PTTG1O95997 202 aa5.62□□□□□ -1.51
CLCN3-201ENST00000347613 IGKV1D-16P01601 117 aa5.62□□□□□ -1.51
CLCN3-201ENST00000347613 TBC1D3HP0C7X1 549 aa5.62□□□□□ -1.51
CLCN3-201ENST00000347613 PSMA1P25786 263 aaKnown RBP5.62□□□□□ -1.51
CLCN3-201ENST00000347613 SLC1A3P43003 542 aa5.62□□□□□ -1.51
CLCN3-201ENST00000347613 MTNR1AP48039 350 aa5.62□□□□□ -1.51
CLCN3-201ENST00000347613 WNT4P56705 351 aa5.62□□□□□ -1.51
CLCN3-201ENST00000347613 OR2B6P58173 313 aa5.62□□□□□ -1.51
CLCN3-201ENST00000347613 TAS2R41P59536 307 aa5.62□□□□□ -1.51
CLCN3-201ENST00000347613 EEF1A1P68104 462 aaKnown RBP5.62□□□□□ -1.51
CLCN3-201ENST00000347613 MGAT2Q10469 447 aa5.62□□□□□ -1.51
CLCN3-201ENST00000347613 DUSP6Q16828 381 aa5.62□□□□□ -1.51
CLCN3-201ENST00000347613 NDUFAF6Q330K2 333 aa5.62□□□□□ -1.51
CLCN3-201ENST00000347613 TMEM95Q3KNT9 176 aa5.62□□□□□ -1.51
CLCN3-201ENST00000347613 GXYLT1Q4G148 440 aa5.62□□□□□ -1.51
CLCN3-201ENST00000347613 SLC25A30Q5SVS4 291 aa5.62□□□□□ -1.51
CLCN3-201ENST00000347613 FHL5Q5TD97 284 aa5.62□□□□□ -1.51
CLCN3-201ENST00000347613 AGAP6Q5VW22 663 aa5.62□□□□□ -1.51
CLCN3-201ENST00000347613 TBC1D3GQ6DHY5 549 aa5.62□□□□□ -1.51
CLCN3-201ENST00000347613 TBC1D3CQ6IPX1 549 aa5.62□□□□□ -1.51
CLCN3-201ENST00000347613 TUBA3EQ6PEY2 450 aa5.62□□□□□ -1.51
CLCN3-201ENST00000347613 FIGNL1Q6PIW4 674 aa5.62□□□□□ -1.51
CLCN3-201ENST00000347613 FBXO46Q6PJ61 603 aaPredicted RBP5.62□□□□□ -1.51
CLCN3-201ENST00000347613 LYPD4Q6UWN0 246 aa5.62□□□□□ -1.51
CLCN3-201ENST00000347613 TMEM92Q6UXU6 159 aa5.62□□□□□ -1.51
CLCN3-201ENST00000347613 QSOX2Q6ZRP7 698 aa5.62□□□□□ -1.51
CLCN3-201ENST00000347613 CPOQ8IVL8 374 aa5.62□□□□□ -1.51
CLCN3-201ENST00000347613 TBC1D3Q8IZP1 549 aaPredicted RBP5.62□□□□□ -1.51
CLCN3-201ENST00000347613 ZNF557Q8N988 423 aaPredicted RBP5.62□□□□□ -1.51
CLCN3-201ENST00000347613 FAM181AQ8N9Y4 354 aa5.62□□□□□ -1.51
CLCN3-201ENST00000347613 C17orf47Q8NEP4 570 aa5.62□□□□□ -1.51
CLCN3-201ENST00000347613 ITPKCQ96DU7 683 aa5.62□□□□□ -1.51
CLCN3-201ENST00000347613 AGAP4Q96P64 663 aa5.62□□□□□ -1.51
CLCN3-201ENST00000347613 SMAD5Q99717 465 aaKnown RBP5.62□□□□□ -1.51
CLCN3-201ENST00000347613 PPP1R3EQ9H7J1 279 aa5.62□□□□□ -1.51
CLCN3-201ENST00000347613 NEK6Q9HC98 313 aa5.62□□□□□ -1.51
CLCN3-201ENST00000347613 RANGRFQ9HD47 186 aaPredicted RBP5.62□□□□□ -1.51
CLCN3-201ENST00000347613 KLHL3Q9UH77 587 aa5.62□□□□□ -1.51
CLCN3-201ENST00000347613 ADAM29Q9UKF5 820 aa5.62□□□□□ -1.51
CLCN3-201ENST00000347613 TRAPPC4Q9Y296 219 aa5.62□□□□□ -1.51
CLCN3-201ENST00000347613 GSAPA4D1B5 854 aa5.62□□□□□ -1.51
CLCN3-201ENST00000347613 SHISA7A6NL88 538 aa5.62□□□□□ -1.51
CLCN3-201ENST00000347613 PLRG1O43660 514 aaKnown RBP5.62□□□□□ -1.51
CLCN3-201ENST00000347613 DYRK3O43781 588 aa5.62□□□□□ -1.51
CLCN3-201ENST00000347613 MRPL3P09001 348 aaKnown RBP5.62□□□□□ -1.51
CLCN3-201ENST00000347613 SMIM10L1P0DMW3 83 aa5.62□□□□□ -1.51
CLCN3-201ENST00000347613 DRD2P14416 443 aa5.62□□□□□ -1.51
CLCN3-201ENST00000347613 POLR2CP19387 275 aaPredicted RBP5.62□□□□□ -1.51
CLCN3-201ENST00000347613 CELP19835 753 aa5.62□□□□□ -1.51
CLCN3-201ENST00000347613 PPP2R1BP30154 601 aa5.62□□□□□ -1.51
CLCN3-201ENST00000347613 DDOSTP39656 456 aa5.62□□□□□ -1.51
CLCN3-201ENST00000347613 RORCP51449 518 aa5.62□□□□□ -1.51
CLCN3-201ENST00000347613 CTAG1AP78358 180 aa5.62□□□□□ -1.51
CLCN3-201ENST00000347613 SFSWAPQ12872 951 aaKnown RBP5.62□□□□□ -1.51
CLCN3-201ENST00000347613 PLK5Q496M5 336 aa5.62□□□□□ -1.51
CLCN3-201ENST00000347613 SPANXN2Q5MJ10 180 aa5.62□□□□□ -1.51
CLCN3-201ENST00000347613 MEDAGQ5VYS4 303 aa5.62□□□□□ -1.51
CLCN3-201ENST00000347613 MFSD12Q6NUT3 480 aa5.62□□□□□ -1.51
CLCN3-201ENST00000347613 ENPP7Q6UWV6 458 aa5.62□□□□□ -1.51
CLCN3-201ENST00000347613 KLBQ86Z14 1044 aa5.62□□□□□ -1.51
CLCN3-201ENST00000347613 MFSD9Q8NBP5 474 aa5.62□□□□□ -1.51
CLCN3-201ENST00000347613 MINDY2Q8NBR6 621 aa5.62□□□□□ -1.51
CLCN3-201ENST00000347613 C9orf43Q8TAL5 461 aaPredicted RBP5.62□□□□□ -1.51
CLCN3-201ENST00000347613 TM4SF19Q96DZ7 209 aa5.62□□□□□ -1.51
CLCN3-201ENST00000347613 ZNF486Q96H40 463 aaPredicted RBP5.62□□□□□ -1.51
CLCN3-201ENST00000347613 PEX11GQ96HA9 241 aa5.62□□□□□ -1.51
CLCN3-201ENST00000347613 SMIM10Q96HG1 83 aa5.62□□□□□ -1.51
CLCN3-201ENST00000347613 MS4A3Q96HJ5 214 aa5.62□□□□□ -1.51
CLCN3-201ENST00000347613 PTCHD1Q96NR3 888 aa5.62□□□□□ -1.51
CLCN3-201ENST00000347613 SDF2Q99470 211 aa5.62□□□□□ -1.51
CLCN3-201ENST00000347613 PINK1Q9BXM7 581 aa5.62□□□□□ -1.51
CLCN3-201ENST00000347613 RBCK1Q9BYM8 510 aa5.62□□□□□ -1.51
CLCN3-201ENST00000347613 CAPN10Q9HC96 672 aa5.62□□□□□ -1.51
CLCN3-201ENST00000347613 FAM60AQ9NP50 221 aa5.62□□□□□ -1.51
CLCN3-201ENST00000347613 FGF20Q9NP95 211 aaPredicted RBP5.62□□□□□ -1.51
CLCN3-201ENST00000347613 MRPS18AQ9NVS2 196 aaKnown RBP5.62□□□□□ -1.51
CLCN3-201ENST00000347613 IL20Q9NYY1 176 aa5.62□□□□□ -1.51
CLCN3-201ENST00000347613 ZNF223Q9UK11 482 aaPredicted RBP5.62□□□□□ -1.51
CLCN3-201ENST00000347613 ACSL5Q9ULC5 683 aa5.62□□□□□ -1.51
CLCN3-201ENST00000347613 CFL2Q9Y281 166 aa5.62□□□□□ -1.51
CLCN3-201ENST00000347613 GRIP1Q9Y3R0 1128 aa5.62□□□□□ -1.51
CLCN3-201ENST00000347613 CMAHPQ9Y471 501 aa5.62□□□□□ -1.51
CLCN3-201ENST00000347613 TRAV27A0A087WT01 109 aa5.61□□□□□ -1.51
CLCN3-201ENST00000347613 A6NCN8 305 aa5.61□□□□□ -1.51
CLCN3-201ENST00000347613 B4DXG7 233 aa5.61□□□□□ -1.51
CLCN3-201ENST00000347613 TSPAN31Q12999 210 aa5.61□□□□□ -1.51
CLCN3-201ENST00000347613 TJAP1Q5JTD0 557 aa5.61□□□□□ -1.51
CLCN3-201ENST00000347613 ANKRD54Q6NXT1 300 aa5.61□□□□□ -1.51
CLCN3-201ENST00000347613 SLC27A4Q6P1M0 643 aa5.61□□□□□ -1.51
CLCN3-201ENST00000347613 CD200R1LQ6Q8B3 271 aa5.61□□□□□ -1.51
CLCN3-201ENST00000347613 FAM131AQ6UXB0 335 aa5.61□□□□□ -1.51
CLCN3-201ENST00000347613 ZNF730Q6ZMV8 503 aa5.61□□□□□ -1.51
CLCN3-201ENST00000347613 AMIGO1Q86WK6 493 aa5.61□□□□□ -1.51
CLCN3-201ENST00000347613 SLC22A18ASQ8N1D0 253 aa5.61□□□□□ -1.51
CLCN3-201ENST00000347613 GHDCQ8N2G8 530 aa5.61□□□□□ -1.51
CLCN3-201ENST00000347613 CYB561A3Q8NBI2 242 aa5.61□□□□□ -1.51
CLCN3-201ENST00000347613 ZPLD1Q8TCW7 415 aa5.61□□□□□ -1.51
CLCN3-201ENST00000347613 FAM3CQ92520 227 aa5.61□□□□□ -1.51
CLCN3-201ENST00000347613 OTULINQ96BN8 352 aa5.61□□□□□ -1.51
CLCN3-201ENST00000347613 SLC41A3Q96GZ6 507 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms