RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 DSN1Q9H410 356 aa12.54□□□□□ -0.4
CDC42-202ENST00000344548 Q9N2J8 555 aa12.54□□□□□ -0.4
CDC42-202ENST00000344548 RARRES3Q9UL19 164 aa12.54□□□□□ -0.4
CDC42-202ENST00000344548 MGAT4BQ9UQ53 548 aa12.54□□□□□ -0.4
CDC42-202ENST00000344548 C17orf51A8MQB3 221 aa12.53□□□□□ -0.4
CDC42-202ENST00000344548 AP3D1O14617 1153 aa12.53□□□□□ -0.4
CDC42-202ENST00000344548 OXSR1O95747 527 aaPredicted RBP12.53□□□□□ -0.4
CDC42-202ENST00000344548 AK1P00568 194 aa12.53□□□□□ -0.4
CDC42-202ENST00000344548 OSMP13725 252 aa12.53□□□□□ -0.4
CDC42-202ENST00000344548 DRD5P21918 477 aa12.53□□□□□ -0.4
CDC42-202ENST00000344548 RORAP35398 523 aa12.53□□□□□ -0.4
CDC42-202ENST00000344548 NUDT6P53370 316 aa12.53□□□□□ -0.4
CDC42-202ENST00000344548 SF3A2Q15428 464 aaKnown RBP12.53□□□□□ -0.4
CDC42-202ENST00000344548 DBX2Q6ZNG2 339 aa12.53□□□□□ -0.4
CDC42-202ENST00000344548 RABEPKQ7Z6M1 372 aa12.53□□□□□ -0.4
CDC42-202ENST00000344548 SPARTQ8N0X7 666 aa12.53□□□□□ -0.4
CDC42-202ENST00000344548 IQCF1Q8N6M8 205 aa12.53□□□□□ -0.4
CDC42-202ENST00000344548 BMPERQ8N8U9 685 aa12.53□□□□□ -0.4
CDC42-202ENST00000344548 SETD9Q8NE22 299 aa12.53□□□□□ -0.4
CDC42-202ENST00000344548 RHOXF1Q8NHV9 184 aa12.53□□□□□ -0.4
CDC42-202ENST00000344548 ADIPOR1Q96A54 375 aa12.53□□□□□ -0.4
CDC42-202ENST00000344548 FAM46AQ96IP4 442 aaKnown RBP12.53□□□□□ -0.4
CDC42-202ENST00000344548 DGCR6LQ9BY27 220 aa12.53□□□□□ -0.4
CDC42-202ENST00000344548 YIPF3Q9GZM5 350 aa12.53□□□□□ -0.4
CDC42-202ENST00000344548 POLR2J3Q9H1A7 115 aaKnown RBP12.53□□□□□ -0.4
CDC42-202ENST00000344548 POLR1BQ9H9Y6 1135 aa12.53□□□□□ -0.4
CDC42-202ENST00000344548 MKKSQ9NPJ1 570 aaPredicted RBP12.53□□□□□ -0.4
CDC42-202ENST00000344548 ERVK-18Q9QC07 812 aa12.53□□□□□ -0.4
CDC42-202ENST00000344548 OR10H1Q9Y4A9 318 aa12.53□□□□□ -0.4
CDC42-202ENST00000344548 CEPT1Q9Y6K0 416 aa12.53□□□□□ -0.4
CDC42-202ENST00000344548 IGLV3-12A0A075B6K2 115 aa12.53□□□□□ -0.4
CDC42-202ENST00000344548 EFCAB7A8K855 629 aa12.53□□□□□ -0.4
CDC42-202ENST00000344548 KHNYNO15037 678 aaKnown RBP12.53□□□□□ -0.4
CDC42-202ENST00000344548 FUT1P19526 365 aa12.53□□□□□ -0.4
CDC42-202ENST00000344548 ACAA2P42765 397 aaKnown RBP12.53□□□□□ -0.4
CDC42-202ENST00000344548 OMPP47874 163 aa12.53□□□□□ -0.4
CDC42-202ENST00000344548 SMIM11AP58511 58 aa12.53□□□□□ -0.4
CDC42-202ENST00000344548 ZFP36L1Q07352 338 aaKnown RBP12.53□□□□□ -0.4
CDC42-202ENST00000344548 OR1Q1Q15612 314 aa12.53□□□□□ -0.4
CDC42-202ENST00000344548 ELAVL1Q15717 326 aaKnown RBP12.53□□□□□ -0.4
CDC42-202ENST00000344548 CNPY1Q3B7I2 92 aa12.53□□□□□ -0.4
CDC42-202ENST00000344548 PLA2G2CQ5R387 149 aa12.53□□□□□ -0.4
CDC42-202ENST00000344548 YOD1Q5VVQ6 348 aaPredicted RBP12.53□□□□□ -0.4
CDC42-202ENST00000344548 FAM199XQ6PEV8 388 aaPredicted RBP12.53□□□□□ -0.4
CDC42-202ENST00000344548 ZNF773Q6PK81 442 aa12.53□□□□□ -0.4
CDC42-202ENST00000344548 APOOLQ6UXV4 268 aa12.53□□□□□ -0.4
CDC42-202ENST00000344548 C16orf47Q6ZP98 133 aaPredicted RBP12.53□□□□□ -0.4
CDC42-202ENST00000344548 ZNF524Q96C55 264 aa12.53□□□□□ -0.4
CDC42-202ENST00000344548 RTN4RQ9BZR6 473 aa12.53□□□□□ -0.4
CDC42-202ENST00000344548 EGLN3Q9H6Z9 239 aa12.53□□□□□ -0.4
CDC42-202ENST00000344548 C11orf16Q9NQ32 467 aa12.53□□□□□ -0.4
CDC42-202ENST00000344548 DNAJB12Q9NXW2 375 aaKnown RBP12.53□□□□□ -0.4
CDC42-202ENST00000344548 TUBA8Q9NY65 449 aaPredicted RBP12.53□□□□□ -0.4
CDC42-202ENST00000344548 SRPK3Q9UPE1 567 aa12.53□□□□□ -0.4
CDC42-202ENST00000344548 COL27A1Q8IZC6 1860 aaPredicted RBP12.52□□□□□ -0.4
CDC42-202ENST00000344548 TEX51A0A1B0GUA7 166 aa12.52□□□□□ -0.41
CDC42-202ENST00000344548 CDX4O14627 284 aaPredicted RBP12.52□□□□□ -0.41
CDC42-202ENST00000344548 UGT2B15P54855 530 aa12.52□□□□□ -0.41
CDC42-202ENST00000344548 SLC35A2P78381 396 aa12.52□□□□□ -0.41
CDC42-202ENST00000344548 ST3GAL3Q11203 375 aa12.52□□□□□ -0.41
CDC42-202ENST00000344548 ILKQ13418 452 aa12.52□□□□□ -0.41
CDC42-202ENST00000344548 TRAM2Q15035 370 aa12.52□□□□□ -0.41
CDC42-202ENST00000344548 BCDIN3DQ7Z5W3 292 aaKnown RBP12.52□□□□□ -0.41
CDC42-202ENST00000344548 PPP1R3BQ86XI6 285 aa12.52□□□□□ -0.41
CDC42-202ENST00000344548 NRMQ8IXM6 262 aa12.52□□□□□ -0.41
CDC42-202ENST00000344548 GATSQ8NAP1 163 aa12.52□□□□□ -0.41
CDC42-202ENST00000344548 RHBDD1Q8TEB9 315 aa12.52□□□□□ -0.41
CDC42-202ENST00000344548 ZNF578Q96N58 590 aaPredicted RBP12.52□□□□□ -0.41
CDC42-202ENST00000344548 GAL3ST4Q96RP7 486 aa12.52□□□□□ -0.41
CDC42-202ENST00000344548 FAM192AQ9GZU8 254 aa12.52□□□□□ -0.41
CDC42-202ENST00000344548 HSPE1-MOB4S4R3N1 261 aa12.52□□□□□ -0.41
CDC42-202ENST00000344548 PMS2P1A4D2B8 440 aa12.51□□□□□ -0.41
CDC42-202ENST00000344548 IDSB3KWA1 339 aa12.51□□□□□ -0.41
CDC42-202ENST00000344548 H3BN98 237 aa12.51□□□□□ -0.41
CDC42-202ENST00000344548 CDC42EP2O14613 210 aa12.51□□□□□ -0.41
CDC42-202ENST00000344548 OIP5O43482 229 aa12.51□□□□□ -0.41
CDC42-202ENST00000344548 ADRA2AP08913 450 aa12.51□□□□□ -0.41
CDC42-202ENST00000344548 CCDC159P0C7I6 412 aa12.51□□□□□ -0.41
CDC42-202ENST00000344548 GPR4P46093 362 aa12.51□□□□□ -0.41
CDC42-202ENST00000344548 GPR143P51810 404 aa12.51□□□□□ -0.41
CDC42-202ENST00000344548 EBPQ15125 230 aaKnown RBP12.51□□□□□ -0.41
CDC42-202ENST00000344548 ZNF730Q6ZMV8 503 aa12.51□□□□□ -0.41
CDC42-202ENST00000344548 BMP8AQ7Z5Y6 402 aa12.51□□□□□ -0.41
CDC42-202ENST00000344548 APLFQ8IW19 511 aaPredicted RBP12.51□□□□□ -0.41
CDC42-202ENST00000344548 OR7G1Q8NGA0 311 aa12.51□□□□□ -0.41
CDC42-202ENST00000344548 OR8D4Q8NGM9 314 aa12.51□□□□□ -0.41
CDC42-202ENST00000344548 SLC38A4Q969I6 547 aa12.51□□□□□ -0.41
CDC42-202ENST00000344548 ZNF566Q969W8 418 aa12.51□□□□□ -0.41
CDC42-202ENST00000344548 PELOQ9BRX2 385 aaKnown RBP12.51□□□□□ -0.41
CDC42-202ENST00000344548 TGIF2Q9GZN2 237 aa12.51□□□□□ -0.41
CDC42-202ENST00000344548 DUSP21Q9H596 190 aa12.51□□□□□ -0.41
CDC42-202ENST00000344548 POLE3Q9NRF9 147 aa12.51□□□□□ -0.41
CDC42-202ENST00000344548 C20orf141Q9NUB4 165 aa12.51□□□□□ -0.41
CDC42-202ENST00000344548 ZNF223Q9UK11 482 aaPredicted RBP12.51□□□□□ -0.41
CDC42-202ENST00000344548 RALGAPA1Q6GYQ0 2036 aa12.51□□□□□ -0.41
CDC42-202ENST00000344548 MAN1A2O60476 641 aa12.51□□□□□ -0.41
CDC42-202ENST00000344548 RFPL3O75679 317 aa12.51□□□□□ -0.41
CDC42-202ENST00000344548 LDOC1O95751 146 aaPredicted RBP12.51□□□□□ -0.41
CDC42-202ENST00000344548 PPICP45877 212 aa12.51□□□□□ -0.41
CDC42-202ENST00000344548 ATP12AP54707 1039 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms