RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 LIN28AQ9H9Z2 209 aaKnown RBP18.51■□□□□ 0.55
RTN1-202ENST00000342503 AMBNQ9NP70 447 aa18.51■□□□□ 0.55
RTN1-202ENST00000342503 PRODH2Q9UF12 536 aa18.51■□□□□ 0.55
RTN1-202ENST00000342503 TMEM221A6NGB7 291 aa18.5■□□□□ 0.55
RTN1-202ENST00000342503 ZNF99A8MXY4 864 aaPredicted RBP18.5■□□□□ 0.55
RTN1-202ENST00000342503 M0R296 226 aa18.5■□□□□ 0.55
RTN1-202ENST00000342503 AGRPO00253 132 aa18.5■□□□□ 0.55
RTN1-202ENST00000342503 ANKRD34CP0C6C1 535 aa18.5■□□□□ 0.55
RTN1-202ENST00000342503 DRD5P21918 477 aa18.5■□□□□ 0.55
RTN1-202ENST00000342503 PCSK6P29122 969 aa18.5■□□□□ 0.55
RTN1-202ENST00000342503 OMPP47874 163 aa18.5■□□□□ 0.55
RTN1-202ENST00000342503 MASP1P48740 699 aa18.5■□□□□ 0.55
RTN1-202ENST00000342503 OR1Q1Q15612 314 aa18.5■□□□□ 0.55
RTN1-202ENST00000342503 KIF18BQ86Y91 864 aa18.5■□□□□ 0.55
RTN1-202ENST00000342503 ALDH16A1Q8IZ83 802 aa18.5■□□□□ 0.55
RTN1-202ENST00000342503 IQCF1Q8N6M8 205 aa18.5■□□□□ 0.55
RTN1-202ENST00000342503 ZNF614Q8N883 585 aa18.5■□□□□ 0.55
RTN1-202ENST00000342503 OR4D9Q8NGE8 314 aa18.5■□□□□ 0.55
RTN1-202ENST00000342503 CEP76Q8TAP6 659 aa18.5■□□□□ 0.55
RTN1-202ENST00000342503 ZNF420Q8TAQ5 688 aaPredicted RBP18.5■□□□□ 0.55
RTN1-202ENST00000342503 TMEM255BQ8WV15 326 aa18.5■□□□□ 0.55
RTN1-202ENST00000342503 C12orf43Q96C57 262 aaKnown RBP18.5■□□□□ 0.55
RTN1-202ENST00000342503 CLIP3Q96DZ5 547 aa18.5■□□□□ 0.55
RTN1-202ENST00000342503 FAM46AQ96IP4 442 aaKnown RBP18.5■□□□□ 0.55
RTN1-202ENST00000342503 SIGLEC11Q96RL6 698 aa18.5■□□□□ 0.55
RTN1-202ENST00000342503 COPS4Q9BT78 406 aa18.5■□□□□ 0.55
RTN1-202ENST00000342503 FKBP14Q9NWM8 211 aa18.5■□□□□ 0.55
RTN1-202ENST00000342503 FBXO4Q9UKT5 387 aa18.5■□□□□ 0.55
RTN1-202ENST00000342503 CBLCQ9ULV8 474 aa18.5■□□□□ 0.55
RTN1-202ENST00000342503 COL5A1P20908 1838 aaPredicted RBP18.5■□□□□ 0.55
RTN1-202ENST00000342503 TRAPPC13A5PLN9 417 aa18.49■□□□□ 0.55
RTN1-202ENST00000342503 TTC36A6NLP5 189 aa18.49■□□□□ 0.55
RTN1-202ENST00000342503 CLCA1A8K7I4 914 aa18.49■□□□□ 0.55
RTN1-202ENST00000342503 PIP5K1CO60331 668 aa18.49■□□□□ 0.55
RTN1-202ENST00000342503 FADS2O95864 444 aaKnown RBP18.49■□□□□ 0.55
RTN1-202ENST00000342503 GP2P55259 537 aaKnown RBP18.49■□□□□ 0.55
RTN1-202ENST00000342503 ACY1Q03154 408 aa18.49■□□□□ 0.55
RTN1-202ENST00000342503 TSPAN31Q12999 210 aa18.49■□□□□ 0.55
RTN1-202ENST00000342503 LSAMPQ13449 338 aa18.49■□□□□ 0.55
RTN1-202ENST00000342503 MBOAT2Q6ZWT7 520 aa18.49■□□□□ 0.55
RTN1-202ENST00000342503 SVOPQ8N4V2 548 aa18.49■□□□□ 0.55
RTN1-202ENST00000342503 BCORP1Q8N888 145 aa18.49■□□□□ 0.55
RTN1-202ENST00000342503 CNOT9Q92600 299 aaKnown RBP18.49■□□□□ 0.55
RTN1-202ENST00000342503 PRSS27Q9BQR3 290 aa18.49■□□□□ 0.55
RTN1-202ENST00000342503 G6PC3Q9BUM1 346 aa18.49■□□□□ 0.55
RTN1-202ENST00000342503 CLN6Q9NWW5 311 aa18.49■□□□□ 0.55
RTN1-202ENST00000342503 CNIH4Q9P003 139 aa18.49■□□□□ 0.55
RTN1-202ENST00000342503 TESQ9UGI8 421 aaKnown RBP18.49■□□□□ 0.55
RTN1-202ENST00000342503 OR10H1Q9Y4A9 318 aa18.49■□□□□ 0.55
RTN1-202ENST00000342503 IGHV5-10-1A0A0J9YXX1 117 aa18.49■□□□□ 0.55
RTN1-202ENST00000342503 FMO6PO60774 539 aa18.49■□□□□ 0.55
RTN1-202ENST00000342503 HOXD12P35452 270 aa18.49■□□□□ 0.55
RTN1-202ENST00000342503 SLC37A1P57057 533 aa18.49■□□□□ 0.55
RTN1-202ENST00000342503 TRIM61Q5EBN2 209 aa18.49■□□□□ 0.55
RTN1-202ENST00000342503 CASP12Q6UXS9 341 aa18.49■□□□□ 0.55
RTN1-202ENST00000342503 CCDC81Q6ZN84 652 aa18.49■□□□□ 0.55
RTN1-202ENST00000342503 PRSS58Q8IYP2 241 aa18.49■□□□□ 0.55
RTN1-202ENST00000342503 TOR1AIP2Q8NFQ8 470 aa18.49■□□□□ 0.55
RTN1-202ENST00000342503 NAT6Q93015 286 aa18.49■□□□□ 0.55
RTN1-202ENST00000342503 MYDGFQ969H8 173 aa18.49■□□□□ 0.55
RTN1-202ENST00000342503 IL4I1Q96RQ9 567 aa18.49■□□□□ 0.55
RTN1-202ENST00000342503 DOK1Q99704 481 aa18.49■□□□□ 0.55
RTN1-202ENST00000342503 DSN1Q9H410 356 aa18.49■□□□□ 0.55
RTN1-202ENST00000342503 EGLN3Q9H6Z9 239 aa18.49■□□□□ 0.55
RTN1-202ENST00000342503 EVA1AQ9H8M9 152 aa18.49■□□□□ 0.55
RTN1-202ENST00000342503 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.49■□□□□ 0.55
RTN1-202ENST00000342503 TCRBV16S1A1N1A0A5B0 115 aa18.48■□□□□ 0.55
RTN1-202ENST00000342503 ENO4A6NNW6 628 aa18.48■□□□□ 0.55
RTN1-202ENST00000342503 NPIPB9F8W1W9 429 aa18.48■□□□□ 0.55
RTN1-202ENST00000342503 AHCYL1O43865 530 aa18.48■□□□□ 0.55
RTN1-202ENST00000342503 LYPD3O95274 346 aa18.48■□□□□ 0.55
RTN1-202ENST00000342503 SNRPGP62308 76 aaKnown RBP18.48■□□□□ 0.55
RTN1-202ENST00000342503 GINS1Q14691 196 aa18.48■□□□□ 0.55
RTN1-202ENST00000342503 ZNF141Q15928 474 aa18.48■□□□□ 0.55
RTN1-202ENST00000342503 NRMQ8IXM6 262 aa18.48■□□□□ 0.55
RTN1-202ENST00000342503 ZSCAN1Q8NBB4 408 aa18.48■□□□□ 0.55
RTN1-202ENST00000342503 IFI44Q8TCB0 444 aa18.48■□□□□ 0.55
RTN1-202ENST00000342503 RORBQ92753 470 aa18.48■□□□□ 0.55
RTN1-202ENST00000342503 ARSGQ96EG1 525 aa18.48■□□□□ 0.55
RTN1-202ENST00000342503 CCDC74BQ96LY2 380 aa18.48■□□□□ 0.55
RTN1-202ENST00000342503 OR6C1Q96RD1 312 aa18.48■□□□□ 0.55
RTN1-202ENST00000342503 PLA2G12AQ9BZM1 189 aa18.48■□□□□ 0.55
RTN1-202ENST00000342503 SLC7A5P2Q9GIP4 190 aa18.48■□□□□ 0.55
RTN1-202ENST00000342503 MKKSQ9NPJ1 570 aaPredicted RBP18.48■□□□□ 0.55
RTN1-202ENST00000342503 ACOT13Q9NPJ3 140 aa18.48■□□□□ 0.55
RTN1-202ENST00000342503 GPR83Q9NYM4 423 aa18.48■□□□□ 0.55
RTN1-202ENST00000342503 SRPK3Q9UPE1 567 aa18.48■□□□□ 0.55
RTN1-202ENST00000342503 SH3D21A4FU49 640 aa18.47■□□□□ 0.55
RTN1-202ENST00000342503 H3BMQ9 156 aa18.47■□□□□ 0.55
RTN1-202ENST00000342503 ARHGAP33O14559 1287 aa18.47■□□□□ 0.55
RTN1-202ENST00000342503 DYRK3O43781 588 aa18.47■□□□□ 0.55
RTN1-202ENST00000342503 PRKNO60260 465 aaPredicted RBP18.47■□□□□ 0.55
RTN1-202ENST00000342503 MAN1A2O60476 641 aa18.47■□□□□ 0.55
RTN1-202ENST00000342503 TRMUO75648 421 aaKnown RBP18.47■□□□□ 0.55
RTN1-202ENST00000342503 CER1O95813 267 aa18.47■□□□□ 0.55
RTN1-202ENST00000342503 CDK1P06493 297 aa18.47■□□□□ 0.55
RTN1-202ENST00000342503 PTNP21246 168 aa18.47■□□□□ 0.55
RTN1-202ENST00000342503 ATP12AP54707 1039 aa18.47■□□□□ 0.55
RTN1-202ENST00000342503 CDK5Q00535 292 aa18.47■□□□□ 0.55
RTN1-202ENST00000342503 COX15Q7KZN9 410 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms