RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 ALDOBP05062 364 aa11.66□□□□□ -0.54
SNRNP48-201ENST00000342415 CSRP3P50461 194 aa11.66□□□□□ -0.54
SNRNP48-201ENST00000342415 LSM11P83369 360 aaKnown RBP eCLIP11.66□□□□□ -0.54
SNRNP48-201ENST00000342415 SF3A2Q15428 464 aaKnown RBP11.66□□□□□ -0.54
SNRNP48-201ENST00000342415 GXYLT1Q4G148 440 aa11.66□□□□□ -0.54
SNRNP48-201ENST00000342415 PRSS45Q7RTY3 260 aa11.66□□□□□ -0.54
SNRNP48-201ENST00000342415 PLA2G15Q8NCC3 412 aa11.66□□□□□ -0.54
SNRNP48-201ENST00000342415 TRMT2BQ96GJ1 504 aaKnown RBP11.66□□□□□ -0.54
SNRNP48-201ENST00000342415 COQ10AQ96MF6 247 aa11.66□□□□□ -0.54
SNRNP48-201ENST00000342415 BABAM2Q9NXR7 383 aa11.66□□□□□ -0.54
SNRNP48-201ENST00000342415 KCMF1Q9P0J7 381 aa11.66□□□□□ -0.54
SNRNP48-201ENST00000342415 CACNG2Q9Y698 323 aa11.66□□□□□ -0.54
SNRNP48-201ENST00000342415 DOCK1Q14185 1865 aa11.66□□□□□ -0.54
SNRNP48-201ENST00000342415 B4DXG7 233 aa11.66□□□□□ -0.54
SNRNP48-201ENST00000342415 CLDN4O14493 209 aa11.66□□□□□ -0.54
SNRNP48-201ENST00000342415 EIF1AYO14602 144 aaKnown RBP11.66□□□□□ -0.54
SNRNP48-201ENST00000342415 HRGP04196 525 aa11.66□□□□□ -0.54
SNRNP48-201ENST00000342415 SOX9P48436 509 aa11.66□□□□□ -0.54
SNRNP48-201ENST00000342415 ZNF33BQ06732 778 aa11.66□□□□□ -0.54
SNRNP48-201ENST00000342415 ZNF234Q14588 700 aa11.66□□□□□ -0.54
SNRNP48-201ENST00000342415 ALG10BQ5I7T1 473 aa11.66□□□□□ -0.54
SNRNP48-201ENST00000342415 NANOGP1Q8N7R0 232 aa11.66□□□□□ -0.54
SNRNP48-201ENST00000342415 SLC16A11Q8NCK7 471 aa11.66□□□□□ -0.54
SNRNP48-201ENST00000342415 ZNF248Q8NDW4 579 aa11.66□□□□□ -0.54
SNRNP48-201ENST00000342415 IL17RDQ8NFM7 739 aa11.66□□□□□ -0.54
SNRNP48-201ENST00000342415 OR7G1Q8NGA0 311 aa11.66□□□□□ -0.54
SNRNP48-201ENST00000342415 MOSPD2Q8NHP6 518 aa11.66□□□□□ -0.54
SNRNP48-201ENST00000342415 NSMAFQ92636 917 aa11.66□□□□□ -0.54
SNRNP48-201ENST00000342415 KATNB1Q9BVA0 655 aa11.66□□□□□ -0.54
SNRNP48-201ENST00000342415 LGR4Q9BXB1 951 aa11.66□□□□□ -0.54
SNRNP48-201ENST00000342415 GABARAPL1Q9H0R8 117 aa11.66□□□□□ -0.54
SNRNP48-201ENST00000342415 RANBP3Q9H6Z4 567 aaPredicted RBP11.66□□□□□ -0.54
SNRNP48-201ENST00000342415 DIABLOQ9NR28 239 aa11.66□□□□□ -0.54
SNRNP48-201ENST00000342415 PNO1Q9NRX1 252 aaKnown RBP11.66□□□□□ -0.54
SNRNP48-201ENST00000342415 MED11Q9P086 117 aa11.66□□□□□ -0.54
SNRNP48-201ENST00000342415 UBQLN2Q9UHD9 624 aa11.66□□□□□ -0.54
SNRNP48-201ENST00000342415 TRBV5-4A0A0C4DH59 114 aa11.65□□□□□ -0.54
SNRNP48-201ENST00000342415 OR6C74A6NCV1 312 aa11.65□□□□□ -0.54
SNRNP48-201ENST00000342415 SLC22A31A6NKX4 558 aa11.65□□□□□ -0.54
SNRNP48-201ENST00000342415 PIP5K1CO60331 668 aa11.65□□□□□ -0.54
SNRNP48-201ENST00000342415 PLATP00750 562 aa11.65□□□□□ -0.54
SNRNP48-201ENST00000342415 CSF3P09919 207 aa11.65□□□□□ -0.54
SNRNP48-201ENST00000342415 PVRP15151 417 aa11.65□□□□□ -0.54
SNRNP48-201ENST00000342415 HIST1H1TP22492 207 aaPredicted RBP11.65□□□□□ -0.54
SNRNP48-201ENST00000342415 SLC6A6P31641 620 aa11.65□□□□□ -0.54
SNRNP48-201ENST00000342415 SQSTM1Q13501 440 aa11.65□□□□□ -0.54
SNRNP48-201ENST00000342415 SAXO2Q658L1 398 aa11.65□□□□□ -0.54
SNRNP48-201ENST00000342415 DPPA4Q7L190 304 aa11.65□□□□□ -0.54
SNRNP48-201ENST00000342415 BBS1Q8NFJ9 593 aa11.65□□□□□ -0.54
SNRNP48-201ENST00000342415 ACOT11Q8WXI4 607 aaPredicted RBP11.65□□□□□ -0.54
SNRNP48-201ENST00000342415 PITX2Q99697 317 aa11.65□□□□□ -0.54
SNRNP48-201ENST00000342415 ZNF559Q9BR84 538 aa11.65□□□□□ -0.54
SNRNP48-201ENST00000342415 TMEM38AQ9H6F2 299 aa11.65□□□□□ -0.54
SNRNP48-201ENST00000342415 ATP13A2Q9NQ11 1180 aa11.65□□□□□ -0.54
SNRNP48-201ENST00000342415 PRDM9Q9NQV7 894 aa11.65□□□□□ -0.54
SNRNP48-201ENST00000342415 PLCXD1Q9NUJ7 323 aa11.65□□□□□ -0.54
SNRNP48-201ENST00000342415 HRASLS2Q9NWW9 162 aa11.65□□□□□ -0.54
SNRNP48-201ENST00000342415 ZSCAN32Q9NX65 697 aa11.65□□□□□ -0.54
SNRNP48-201ENST00000342415 ACSL5Q9ULC5 683 aa11.65□□□□□ -0.54
SNRNP48-201ENST00000342415 PLEKHA6Q9Y2H5 1048 aa11.65□□□□□ -0.54
SNRNP48-201ENST00000342415 GAPDHSO14556 408 aaPredicted RBP11.65□□□□□ -0.54
SNRNP48-201ENST00000342415 FCMRO60667 390 aa11.65□□□□□ -0.54
SNRNP48-201ENST00000342415 FUT1P19526 365 aa11.65□□□□□ -0.54
SNRNP48-201ENST00000342415 MAP3K8P41279 467 aa11.65□□□□□ -0.54
SNRNP48-201ENST00000342415 DNASE1L1P49184 302 aa11.65□□□□□ -0.54
SNRNP48-201ENST00000342415 FABP5Q01469 135 aa11.65□□□□□ -0.54
SNRNP48-201ENST00000342415 SNTA1Q13424 505 aa11.65□□□□□ -0.54
SNRNP48-201ENST00000342415 SSX1Q16384 188 aa11.65□□□□□ -0.54
SNRNP48-201ENST00000342415 FAAH2Q6GMR7 532 aa11.65□□□□□ -0.54
SNRNP48-201ENST00000342415 LYPD4Q6UWN0 246 aa11.65□□□□□ -0.54
SNRNP48-201ENST00000342415 COMMD7Q86VX2 200 aa11.65□□□□□ -0.54
SNRNP48-201ENST00000342415 SAMD14Q8IZD0 417 aaPredicted RBP11.65□□□□□ -0.54
SNRNP48-201ENST00000342415 ARMC10Q8N2F6 343 aa11.65□□□□□ -0.54
SNRNP48-201ENST00000342415 CPXM2Q8N436 756 aa11.65□□□□□ -0.54
SNRNP48-201ENST00000342415 OR13C2Q8NGS9 318 aa11.65□□□□□ -0.54
SNRNP48-201ENST00000342415 PSD2Q9BQI7 771 aa11.65□□□□□ -0.54
SNRNP48-201ENST00000342415 MKRN2Q9H000 416 aaKnown RBP11.65□□□□□ -0.54
SNRNP48-201ENST00000342415 KLHL31Q9H511 634 aa11.65□□□□□ -0.54
SNRNP48-201ENST00000342415 CKLFQ9UBR5 152 aa11.65□□□□□ -0.54
SNRNP48-201ENST00000342415 PLEKHM1Q9Y4G2 1056 aa11.65□□□□□ -0.54
SNRNP48-201ENST00000342415 FOXE1O00358 373 aaPredicted RBP11.65□□□□□ -0.54
SNRNP48-201ENST00000342415 ARPC1BO15143 372 aaKnown RBP11.65□□□□□ -0.54
SNRNP48-201ENST00000342415 OR7A10O76100 309 aa11.65□□□□□ -0.54
SNRNP48-201ENST00000342415 FGF19O95750 216 aa11.65□□□□□ -0.54
SNRNP48-201ENST00000342415 ZNF888P0CJ79 500 aaPredicted RBP11.65□□□□□ -0.54
SNRNP48-201ENST00000342415 ITGA3P26006 1051 aa11.65□□□□□ -0.54
SNRNP48-201ENST00000342415 POU6F2P78424 691 aaPredicted RBP11.65□□□□□ -0.54
SNRNP48-201ENST00000342415 PGGHGQ32M88 737 aa11.65□□□□□ -0.54
SNRNP48-201ENST00000342415 TMEM31Q5JXX7 168 aa11.65□□□□□ -0.54
SNRNP48-201ENST00000342415 TMPRSS9Q7Z410 1059 aa11.65□□□□□ -0.54
SNRNP48-201ENST00000342415 ASPGQ86U10 573 aa11.65□□□□□ -0.54
SNRNP48-201ENST00000342415 PAQR7Q86WK9 346 aa11.65□□□□□ -0.54
SNRNP48-201ENST00000342415 TMC8Q8IU68 726 aa11.65□□□□□ -0.54
SNRNP48-201ENST00000342415 ZFPM2Q8WW38 1151 aa11.65□□□□□ -0.54
SNRNP48-201ENST00000342415 SLC25A46Q96AG3 418 aa11.65□□□□□ -0.54
SNRNP48-201ENST00000342415 NEURL3Q96EH8 262 aa11.65□□□□□ -0.54
SNRNP48-201ENST00000342415 LRIG1Q96JA1 1093 aa11.65□□□□□ -0.54
SNRNP48-201ENST00000342415 RAB11FIP5Q9BXF6 653 aa11.65□□□□□ -0.54
SNRNP48-201ENST00000342415 CDCA4Q9BXL8 241 aa11.65□□□□□ -0.54
SNRNP48-201ENST00000342415 POT1Q9NUX5 634 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms