RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 SARAFQ96BY9 339 aa13.87□□□□□ -0.19
UBE3B-201ENST00000340074 OR2B2Q9GZK3 357 aa13.87□□□□□ -0.19
UBE3B-201ENST00000340074 HOXD1Q9GZZ0 328 aa13.87□□□□□ -0.19
UBE3B-201ENST00000340074 TPT1P8Q9HAU6 139 aa13.87□□□□□ -0.19
UBE3B-201ENST00000340074 PNPLA3Q9NST1 481 aa13.87□□□□□ -0.19
UBE3B-201ENST00000340074 KLHL14Q9P2G3 628 aa13.87□□□□□ -0.19
UBE3B-201ENST00000340074 ACAD8Q9UKU7 415 aa13.87□□□□□ -0.19
UBE3B-201ENST00000340074 A0A096LPI6 279 aa13.86□□□□□ -0.19
UBE3B-201ENST00000340074 C15orf38-AP3S2A0A0A6YYH1 394 aa13.86□□□□□ -0.19
UBE3B-201ENST00000340074 A0A1W2PP18 115 aa13.86□□□□□ -0.19
UBE3B-201ENST00000340074 A0A1W2PQD3 144 aa13.86□□□□□ -0.19
UBE3B-201ENST00000340074 PRAMEF27A3QJZ7 478 aa13.86□□□□□ -0.19
UBE3B-201ENST00000340074 NPIPB9F8W1W9 429 aa13.86□□□□□ -0.19
UBE3B-201ENST00000340074 BCKDKO14874 412 aa13.86□□□□□ -0.19
UBE3B-201ENST00000340074 GMFGO60234 142 aa13.86□□□□□ -0.19
UBE3B-201ENST00000340074 FCMRO60667 390 aa13.86□□□□□ -0.19
UBE3B-201ENST00000340074 STX11O75558 287 aa13.86□□□□□ -0.19
UBE3B-201ENST00000340074 LDLRP01130 860 aa13.86□□□□□ -0.19
UBE3B-201ENST00000340074 TCEA1P23193 301 aaKnown RBP13.86□□□□□ -0.19
UBE3B-201ENST00000340074 DPP4P27487 766 aa13.86□□□□□ -0.19
UBE3B-201ENST00000340074 RNF144AP50876 292 aaPredicted RBP13.86□□□□□ -0.19
UBE3B-201ENST00000340074 ATP12AP54707 1039 aa13.86□□□□□ -0.19
UBE3B-201ENST00000340074 GYS2P54840 703 aa13.86□□□□□ -0.19
UBE3B-201ENST00000340074 DSCR4P56555 118 aaPredicted RBP13.86□□□□□ -0.19
UBE3B-201ENST00000340074 GPR68Q15743 365 aa13.86□□□□□ -0.19
UBE3B-201ENST00000340074 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.86□□□□□ -0.19
UBE3B-201ENST00000340074 ZNF527Q8NB42 609 aa13.86□□□□□ -0.19
UBE3B-201ENST00000340074 OR14L1PQ8NHC6 308 aa13.86□□□□□ -0.19
UBE3B-201ENST00000340074 ROPN1LQ96C74 230 aa13.86□□□□□ -0.19
UBE3B-201ENST00000340074 ZNF350Q9GZX5 532 aa13.86□□□□□ -0.19
UBE3B-201ENST00000340074 TAS2R10Q9NYW0 307 aa13.86□□□□□ -0.19
UBE3B-201ENST00000340074 SLAMF8Q9P0V8 285 aa13.86□□□□□ -0.19
UBE3B-201ENST00000340074 DKKL1Q9UK85 242 aa13.86□□□□□ -0.19
UBE3B-201ENST00000340074 MKLN1Q9UL63 735 aa13.86□□□□□ -0.19
UBE3B-201ENST00000340074 MEMO1Q9Y316 297 aa13.86□□□□□ -0.19
UBE3B-201ENST00000340074 KIAA1549Q9HCM3 1950 aa13.86□□□□□ -0.19
UBE3B-201ENST00000340074 IGLV3-32A0A0A0MS00 114 aa13.85□□□□□ -0.19
UBE3B-201ENST00000340074 WIPF3A6NGB9 483 aa13.85□□□□□ -0.19
UBE3B-201ENST00000340074 ESRRAP11474 423 aaPredicted RBP13.85□□□□□ -0.19
UBE3B-201ENST00000340074 HOXB9P17482 250 aaPredicted RBP13.85□□□□□ -0.19
UBE3B-201ENST00000340074 ANXA11P50995 505 aaKnown RBP13.85□□□□□ -0.19
UBE3B-201ENST00000340074 MVDP53602 400 aa13.85□□□□□ -0.19
UBE3B-201ENST00000340074 SEC24CP53992 1094 aa13.85□□□□□ -0.19
UBE3B-201ENST00000340074 PER3P56645 1201 aa13.85□□□□□ -0.19
UBE3B-201ENST00000340074 CRYZQ08257 329 aaKnown RBP13.85□□□□□ -0.19
UBE3B-201ENST00000340074 CD226Q15762 336 aa13.85□□□□□ -0.19
UBE3B-201ENST00000340074 GPAT3Q53EU6 434 aa13.85□□□□□ -0.19
UBE3B-201ENST00000340074 KLHL26Q53HC5 615 aa13.85□□□□□ -0.19
UBE3B-201ENST00000340074 LRIF1Q5T3J3 769 aa13.85□□□□□ -0.19
UBE3B-201ENST00000340074 WLSQ5T9L3 541 aa13.85□□□□□ -0.19
UBE3B-201ENST00000340074 TYW3Q6IPR3 259 aaKnown RBP13.85□□□□□ -0.19
UBE3B-201ENST00000340074 IFNEQ86WN2 208 aa13.85□□□□□ -0.19
UBE3B-201ENST00000340074 ZNF614Q8N883 585 aa13.85□□□□□ -0.19
UBE3B-201ENST00000340074 PHOSPHO1Q8TCT1 267 aa13.85□□□□□ -0.19
UBE3B-201ENST00000340074 C10orf82Q8WW14 230 aa13.85□□□□□ -0.19
UBE3B-201ENST00000340074 DTNBP1Q96EV8 351 aa13.85□□□□□ -0.19
UBE3B-201ENST00000340074 CCDC120Q96HB5 630 aa13.85□□□□□ -0.19
UBE3B-201ENST00000340074 TIMP4Q99727 224 aa13.85□□□□□ -0.19
UBE3B-201ENST00000340074 TP63Q9H3D4 680 aaPredicted RBP13.85□□□□□ -0.19
UBE3B-201ENST00000340074 PTGES2Q9H7Z7 377 aa13.85□□□□□ -0.19
UBE3B-201ENST00000340074 SLC25A37Q9NYZ2 338 aa13.85□□□□□ -0.19
UBE3B-201ENST00000340074 MRPS18CQ9Y3D5 142 aaKnown RBP13.85□□□□□ -0.19
UBE3B-201ENST00000340074 WDR45Q9Y484 360 aa13.85□□□□□ -0.19
UBE3B-201ENST00000340074 ICE1Q9Y2F5 2266 aa13.84□□□□□ -0.19
UBE3B-201ENST00000340074 CLIC1O00299 241 aa13.84□□□□□ -0.19
UBE3B-201ENST00000340074 ZIC3O60481 467 aa13.84□□□□□ -0.19
UBE3B-201ENST00000340074 H6PDO95479 791 aa13.84□□□□□ -0.19
UBE3B-201ENST00000340074 ETFAP13804 333 aa13.84□□□□□ -0.19
UBE3B-201ENST00000340074 BMP7P18075 431 aa13.84□□□□□ -0.19
UBE3B-201ENST00000340074 CRATP43155 626 aa13.84□□□□□ -0.19
UBE3B-201ENST00000340074 TXNL4AP83876 142 aaKnown RBP13.84□□□□□ -0.19
UBE3B-201ENST00000340074 GANABQ14697 944 aaKnown RBP13.84□□□□□ -0.19
UBE3B-201ENST00000340074 SYPL1Q16563 259 aa13.84□□□□□ -0.19
UBE3B-201ENST00000340074 NHSL2Q5HYW2 709 aa13.84□□□□□ -0.19
UBE3B-201ENST00000340074 DCST1Q5T197 706 aa13.84□□□□□ -0.19
UBE3B-201ENST00000340074 PDZK1Q5T2W1 519 aa13.84□□□□□ -0.19
UBE3B-201ENST00000340074 VASNQ6EMK4 673 aa13.84□□□□□ -0.19
UBE3B-201ENST00000340074 ZNF585AQ6P3V2 769 aa13.84□□□□□ -0.19
UBE3B-201ENST00000340074 NCCRP1Q6ZVX7 275 aaPredicted RBP13.84□□□□□ -0.19
UBE3B-201ENST00000340074 MISPQ8IVT2 679 aa13.84□□□□□ -0.19
UBE3B-201ENST00000340074 ABTB1Q969K4 478 aaPredicted RBP13.84□□□□□ -0.19
UBE3B-201ENST00000340074 C1GALT1C1Q96EU7 318 aa13.84□□□□□ -0.19
UBE3B-201ENST00000340074 SH3YL1Q96HL8 342 aaPredicted RBP13.84□□□□□ -0.19
UBE3B-201ENST00000340074 UGT2B28Q9BY64 529 aa13.84□□□□□ -0.19
UBE3B-201ENST00000340074 NMUR2Q9GZQ4 415 aa13.84□□□□□ -0.19
UBE3B-201ENST00000340074 SAR1AQ9NR31 198 aa13.84□□□□□ -0.19
UBE3B-201ENST00000340074 ALKBH4Q9NXW9 302 aa13.84□□□□□ -0.19
UBE3B-201ENST00000340074 VAPAQ9P0L0 249 aa13.84□□□□□ -0.19
UBE3B-201ENST00000340074 SUCOQ9UBS9 1254 aaKnown RBP13.84□□□□□ -0.19
UBE3B-201ENST00000340074 KCNE5Q9UJ90 142 aa13.84□□□□□ -0.19
UBE3B-201ENST00000340074 RPH3AQ9Y2J0 694 aaPredicted RBP13.84□□□□□ -0.19
UBE3B-201ENST00000340074 NDUFAF1Q9Y375 327 aa13.84□□□□□ -0.19
UBE3B-201ENST00000340074 DTNAQ9Y4J8 743 aa13.84□□□□□ -0.19
UBE3B-201ENST00000340074 DOCK7Q96N67 2140 aa13.83□□□□□ -0.19
UBE3B-201ENST00000340074 SPTBN1Q01082 2364 aaKnown RBP13.83□□□□□ -0.19
UBE3B-201ENST00000340074 CENPVL1A0A0U1RR11 272 aa13.83□□□□□ -0.2
UBE3B-201ENST00000340074 E9PLN8 166 aa13.83□□□□□ -0.2
UBE3B-201ENST00000340074 ANGPT2O15123 496 aa13.83□□□□□ -0.2
UBE3B-201ENST00000340074 KIAA0513O60268 411 aa13.83□□□□□ -0.2
UBE3B-201ENST00000340074 ZG16O60844 167 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms