RNA–Protein interactions for RNA: ENST00000340026.10

TRAF3IP2-201, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-201ENST00000340026 PCED1AQ9H1Q7 454 aa9.96□□□□□ -0.81
TRAF3IP2-201ENST00000340026 HRASLS2Q9NWW9 162 aa9.96□□□□□ -0.81
TRAF3IP2-201ENST00000340026 NPAP1Q9NZP6 1156 aa9.96□□□□□ -0.81
TRAF3IP2-201ENST00000340026 ATG2BQ96BY7 2078 aa9.96□□□□□ -0.82
TRAF3IP2-201ENST00000340026 BHLHE40O14503 412 aa9.96□□□□□ -0.82
TRAF3IP2-201ENST00000340026 CKMT1AP12532 417 aa9.96□□□□□ -0.82
TRAF3IP2-201ENST00000340026 PTGER1P34995 402 aa9.96□□□□□ -0.82
TRAF3IP2-201ENST00000340026 SLC1A3P43003 542 aa9.96□□□□□ -0.82
TRAF3IP2-201ENST00000340026 SLC9A3P48764 834 aa9.96□□□□□ -0.82
TRAF3IP2-201ENST00000340026 CDH11P55287 796 aa9.96□□□□□ -0.82
TRAF3IP2-201ENST00000340026 POU6F2P78424 691 aaPredicted RBP9.96□□□□□ -0.82
TRAF3IP2-201ENST00000340026 CADM3Q8N126 398 aa9.96□□□□□ -0.82
TRAF3IP2-201ENST00000340026 C7orf57Q8NEG2 295 aa9.96□□□□□ -0.82
TRAF3IP2-201ENST00000340026 ZCCHC10Q8TBK6 192 aa9.96□□□□□ -0.82
TRAF3IP2-201ENST00000340026 TM9SF4Q92544 642 aa9.96□□□□□ -0.82
TRAF3IP2-201ENST00000340026 TMCO6Q96DC7 493 aa9.96□□□□□ -0.82
TRAF3IP2-201ENST00000340026 SLC2A4RGQ9NR83 387 aa9.96□□□□□ -0.82
TRAF3IP2-201ENST00000340026 HAO2Q9NYQ3 351 aa9.96□□□□□ -0.82
TRAF3IP2-201ENST00000340026 CNIH4Q9P003 139 aa9.96□□□□□ -0.82
TRAF3IP2-201ENST00000340026 CBLCQ9ULV8 474 aa9.96□□□□□ -0.82
TRAF3IP2-201ENST00000340026 MRPS2Q9Y399 296 aaKnown RBP9.96□□□□□ -0.82
TRAF3IP2-201ENST00000340026 CDH23Q9H251 3354 aa9.95□□□□□ -0.82
TRAF3IP2-201ENST00000340026 LILRA5A6NI73 299 aa9.95□□□□□ -0.82
TRAF3IP2-201ENST00000340026 SLC30A4O14863 429 aa9.95□□□□□ -0.82
TRAF3IP2-201ENST00000340026 RCBTB2O95199 551 aa9.95□□□□□ -0.82
TRAF3IP2-201ENST00000340026 CBX7O95931 251 aa9.95□□□□□ -0.82
TRAF3IP2-201ENST00000340026 IMPDH2P12268 514 aa9.95□□□□□ -0.82
TRAF3IP2-201ENST00000340026 GNSP15586 552 aa9.95□□□□□ -0.82
TRAF3IP2-201ENST00000340026 S1PR1P21453 382 aa9.95□□□□□ -0.82
TRAF3IP2-201ENST00000340026 TBXA2RP21731 343 aa9.95□□□□□ -0.82
TRAF3IP2-201ENST00000340026 HTR2AP28223 471 aa9.95□□□□□ -0.82
TRAF3IP2-201ENST00000340026 FAM53BQ14153 422 aa9.95□□□□□ -0.82
TRAF3IP2-201ENST00000340026 TCEA2Q15560 299 aa9.95□□□□□ -0.82
TRAF3IP2-201ENST00000340026 OR1Q1Q15612 314 aa9.95□□□□□ -0.82
TRAF3IP2-201ENST00000340026 MRPL2Q5T653 305 aaKnown RBP9.95□□□□□ -0.82
TRAF3IP2-201ENST00000340026 SYT13Q7L8C5 426 aa9.95□□□□□ -0.82
TRAF3IP2-201ENST00000340026 ZNF595Q8IYB9 648 aa9.95□□□□□ -0.82
TRAF3IP2-201ENST00000340026 SDR16C5Q8N3Y7 309 aa9.95□□□□□ -0.82
TRAF3IP2-201ENST00000340026 ARIH2OSQ8N7S6 290 aa9.95□□□□□ -0.82
TRAF3IP2-201ENST00000340026 COX18Q8N8Q8 333 aa9.95□□□□□ -0.82
TRAF3IP2-201ENST00000340026 SLC2A12Q8TD20 617 aa9.95□□□□□ -0.82
TRAF3IP2-201ENST00000340026 TMEM255BQ8WV15 326 aa9.95□□□□□ -0.82
TRAF3IP2-201ENST00000340026 SNRNP27Q8WVK2 155 aaKnown RBP9.95□□□□□ -0.82
TRAF3IP2-201ENST00000340026 TMEM239Q8WW34 195 aa9.95□□□□□ -0.82
TRAF3IP2-201ENST00000340026 AP3S1Q92572 193 aa9.95□□□□□ -0.82
TRAF3IP2-201ENST00000340026 TRMT61AQ96FX7 289 aaKnown RBP9.95□□□□□ -0.82
TRAF3IP2-201ENST00000340026 KCTD7Q96MP8 289 aa9.95□□□□□ -0.82
TRAF3IP2-201ENST00000340026 ANKRA2Q9H9E1 313 aa9.95□□□□□ -0.82
TRAF3IP2-201ENST00000340026 CLDND1Q9NY35 253 aa9.95□□□□□ -0.82
TRAF3IP2-201ENST00000340026 WSB2Q9NYS7 404 aaPredicted RBP9.95□□□□□ -0.82
TRAF3IP2-201ENST00000340026 KCNE5Q9UJ90 142 aa9.95□□□□□ -0.82
TRAF3IP2-201ENST00000340026 SLC7A7Q9UM01 511 aa9.95□□□□□ -0.82
TRAF3IP2-201ENST00000340026 CAB39Q9Y376 341 aaPredicted RBP9.95□□□□□ -0.82
TRAF3IP2-201ENST00000340026 V9GYH0 126 aa9.95□□□□□ -0.82
TRAF3IP2-201ENST00000340026 A0A1W2PPC4 97 aa9.95□□□□□ -0.82
TRAF3IP2-201ENST00000340026 UNC119BA6NIH7 251 aa9.95□□□□□ -0.82
TRAF3IP2-201ENST00000340026 FRS3O43559 492 aa9.95□□□□□ -0.82
TRAF3IP2-201ENST00000340026 CHP2O43745 196 aa9.95□□□□□ -0.82
TRAF3IP2-201ENST00000340026 AKAP8O43823 692 aaKnown RBP9.95□□□□□ -0.82
TRAF3IP2-201ENST00000340026 MSL3P1P0C860 447 aa9.95□□□□□ -0.82
TRAF3IP2-201ENST00000340026 TNFSF8P32971 234 aa9.95□□□□□ -0.82
TRAF3IP2-201ENST00000340026 PSMD4P55036 377 aaKnown RBP9.95□□□□□ -0.82
TRAF3IP2-201ENST00000340026 RUNX1T1Q06455 604 aa9.95□□□□□ -0.82
TRAF3IP2-201ENST00000340026 ZNF155Q12901 538 aaPredicted RBP9.95□□□□□ -0.82
TRAF3IP2-201ENST00000340026 ZNF141Q15928 474 aa9.95□□□□□ -0.82
TRAF3IP2-201ENST00000340026 MAPK14Q16539 360 aa9.95□□□□□ -0.82
TRAF3IP2-201ENST00000340026 LINC00114Q6XXX2 140 aa9.95□□□□□ -0.82
TRAF3IP2-201ENST00000340026 BCDIN3DQ7Z5W3 292 aaKnown RBP9.95□□□□□ -0.82
TRAF3IP2-201ENST00000340026 PARGQ86W56 976 aa9.95□□□□□ -0.82
TRAF3IP2-201ENST00000340026 C17orf82Q86X59 251 aaPredicted RBP9.95□□□□□ -0.82
TRAF3IP2-201ENST00000340026 TMEM52Q8NDY8 209 aa9.95□□□□□ -0.82
TRAF3IP2-201ENST00000340026 OR10G6Q8NH81 332 aa9.95□□□□□ -0.82
TRAF3IP2-201ENST00000340026 ASB15Q8WXK1 588 aa9.95□□□□□ -0.82
TRAF3IP2-201ENST00000340026 ABHD8Q96I13 439 aa9.95□□□□□ -0.82
TRAF3IP2-201ENST00000340026 RAB33BQ9H082 229 aa9.95□□□□□ -0.82
TRAF3IP2-201ENST00000340026 UBQLN3Q9H347 655 aa9.95□□□□□ -0.82
TRAF3IP2-201ENST00000340026 TMEM74BQ9NUR3 256 aa9.95□□□□□ -0.82
TRAF3IP2-201ENST00000340026 SIDT1Q9NXL6 827 aaKnown RBP9.95□□□□□ -0.82
TRAF3IP2-201ENST00000340026 GSTK1Q9Y2Q3 226 aa9.95□□□□□ -0.82
TRAF3IP2-201ENST00000340026 A0A0B4J2E0 115 aa9.94□□□□□ -0.82
TRAF3IP2-201ENST00000340026 A0A1B0GX12 115 aa9.94□□□□□ -0.82
TRAF3IP2-201ENST00000340026 NPIPB9F8W1W9 429 aa9.94□□□□□ -0.82
TRAF3IP2-201ENST00000340026 DNAJB6O75190 326 aa9.94□□□□□ -0.82
TRAF3IP2-201ENST00000340026 TSPAN19P0C672 248 aa9.94□□□□□ -0.82
TRAF3IP2-201ENST00000340026 ZGLP1P0C6A0 271 aa9.94□□□□□ -0.82
TRAF3IP2-201ENST00000340026 RNF144AP50876 292 aaPredicted RBP9.94□□□□□ -0.82
TRAF3IP2-201ENST00000340026 FOXK2Q01167 660 aa9.94□□□□□ -0.82
TRAF3IP2-201ENST00000340026 PLAURQ03405 335 aa9.94□□□□□ -0.82
TRAF3IP2-201ENST00000340026 RIN1Q13671 783 aa9.94□□□□□ -0.82
TRAF3IP2-201ENST00000340026 LIPKQ5VXJ0 399 aa9.94□□□□□ -0.82
TRAF3IP2-201ENST00000340026 METAP1DQ6UB28 335 aaPredicted RBP9.94□□□□□ -0.82
TRAF3IP2-201ENST00000340026 KLHL36Q8N4N3 616 aa9.94□□□□□ -0.82
TRAF3IP2-201ENST00000340026 C19orf47Q8N9M1 422 aaKnown RBP9.94□□□□□ -0.82
TRAF3IP2-201ENST00000340026 ZBTB8BQ8NAP8 495 aaPredicted RBP9.94□□□□□ -0.82
TRAF3IP2-201ENST00000340026 COL26A1Q96A83 441 aa9.94□□□□□ -0.82
TRAF3IP2-201ENST00000340026 CD180Q99467 661 aa9.94□□□□□ -0.82
TRAF3IP2-201ENST00000340026 CNPPD1Q9BV87 410 aa9.94□□□□□ -0.82
TRAF3IP2-201ENST00000340026 CMC2Q9NRP2 79 aa9.94□□□□□ -0.82
TRAF3IP2-201ENST00000340026 PCDHGB2Q9Y5G2 931 aa9.94□□□□□ -0.82
TRAF3IP2-201ENST00000340026 CDC42EP2O14613 210 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms