RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 AP1S1P61966 158 aa9.05□□□□□ -0.96
PTCHD4-201ENST00000339488 SREBF2Q12772 1141 aa9.05□□□□□ -0.96
PTCHD4-201ENST00000339488 PAFAH1B3Q15102 231 aaKnown RBP9.05□□□□□ -0.96
PTCHD4-201ENST00000339488 DHCR24Q15392 516 aa9.05□□□□□ -0.96
PTCHD4-201ENST00000339488 RPE65Q16518 533 aa9.05□□□□□ -0.96
PTCHD4-201ENST00000339488 ZNF791Q3KP31 576 aaPredicted RBP9.05□□□□□ -0.96
PTCHD4-201ENST00000339488 GLT8D1Q68CQ7 371 aa9.05□□□□□ -0.96
PTCHD4-201ENST00000339488 MOB3CQ70IA8 216 aa9.05□□□□□ -0.96
PTCHD4-201ENST00000339488 SCD5Q86SK9 330 aa9.05□□□□□ -0.96
PTCHD4-201ENST00000339488 LRRTM4Q86VH4 590 aa9.05□□□□□ -0.96
PTCHD4-201ENST00000339488 GPSM1Q86YR5 675 aa9.05□□□□□ -0.96
PTCHD4-201ENST00000339488 CLECL1Q8IZS7 167 aa9.05□□□□□ -0.96
PTCHD4-201ENST00000339488 ROBO4Q8WZ75 1007 aa9.05□□□□□ -0.96
PTCHD4-201ENST00000339488 MRPS31Q92665 395 aaKnown RBP9.05□□□□□ -0.96
PTCHD4-201ENST00000339488 CCDC74BQ96LY2 380 aa9.05□□□□□ -0.96
PTCHD4-201ENST00000339488 INSM2Q96T92 566 aaPredicted RBP9.05□□□□□ -0.96
PTCHD4-201ENST00000339488 IFT27Q9BW83 186 aa9.05□□□□□ -0.96
PTCHD4-201ENST00000339488 TCF7L1Q9HCS4 588 aa9.05□□□□□ -0.96
PTCHD4-201ENST00000339488 CTPS2Q9NRF8 586 aa9.05□□□□□ -0.96
PTCHD4-201ENST00000339488 CYSLTR2Q9NS75 346 aa9.05□□□□□ -0.96
PTCHD4-201ENST00000339488 POT1Q9NUX5 634 aa9.05□□□□□ -0.96
PTCHD4-201ENST00000339488 OPN4Q9UHM6 478 aa9.05□□□□□ -0.96
PTCHD4-201ENST00000339488 ZMIZ1Q9ULJ6 1067 aa9.05□□□□□ -0.96
PTCHD4-201ENST00000339488 TP53TG5Q9Y2B4 290 aa9.05□□□□□ -0.96
PTCHD4-201ENST00000339488 ZAR1LA6NP61 321 aa9.04□□□□□ -0.96
PTCHD4-201ENST00000339488 H0YCG3 227 aa9.04□□□□□ -0.96
PTCHD4-201ENST00000339488 WNT9AO14904 365 aa9.04□□□□□ -0.96
PTCHD4-201ENST00000339488 PPM1DO15297 605 aa9.04□□□□□ -0.96
PTCHD4-201ENST00000339488 FADS1O60427 444 aa9.04□□□□□ -0.96
PTCHD4-201ENST00000339488 CYTIPO60759 359 aa9.04□□□□□ -0.96
PTCHD4-201ENST00000339488 UBCP0CG48 685 aaKnown RBP9.04□□□□□ -0.96
PTCHD4-201ENST00000339488 AGAP20933 346 aa9.04□□□□□ -0.96
PTCHD4-201ENST00000339488 GABRR2P28476 465 aa9.04□□□□□ -0.96
PTCHD4-201ENST00000339488 CRABP1P29762 137 aa9.04□□□□□ -0.96
PTCHD4-201ENST00000339488 MAP3K8P41279 467 aa9.04□□□□□ -0.96
PTCHD4-201ENST00000339488 RAP2BP61225 183 aa9.04□□□□□ -0.96
PTCHD4-201ENST00000339488 NDUFAF6Q330K2 333 aa9.04□□□□□ -0.96
PTCHD4-201ENST00000339488 SCGB2B2Q4G0G5 96 aa9.04□□□□□ -0.96
PTCHD4-201ENST00000339488 GFI1BQ5VTD9 330 aa9.04□□□□□ -0.96
PTCHD4-201ENST00000339488 TECPR1Q7Z6L1 1165 aa9.04□□□□□ -0.96
PTCHD4-201ENST00000339488 TAC4Q86UU9 113 aa9.04□□□□□ -0.96
PTCHD4-201ENST00000339488 SLITRK4Q8IW52 837 aa9.04□□□□□ -0.96
PTCHD4-201ENST00000339488 KLHDC8BQ8IXV7 354 aa9.04□□□□□ -0.96
PTCHD4-201ENST00000339488 RNF113BQ8IZP6 322 aaKnown RBP9.04□□□□□ -0.96
PTCHD4-201ENST00000339488 PCSK9Q8NBP7 692 aaKnown RBP9.04□□□□□ -0.96
PTCHD4-201ENST00000339488 TAAR1Q96RJ0 339 aa9.04□□□□□ -0.96
PTCHD4-201ENST00000339488 ALG8Q9BVK2 526 aa9.04□□□□□ -0.96
PTCHD4-201ENST00000339488 FAM117AQ9C073 453 aa9.04□□□□□ -0.96
PTCHD4-201ENST00000339488 OR51B6Q9H340 312 aa9.04□□□□□ -0.96
PTCHD4-201ENST00000339488 PIGMQ9H3S5 423 aa9.04□□□□□ -0.96
PTCHD4-201ENST00000339488 KLHL1Q9NR64 748 aa9.04□□□□□ -0.96
PTCHD4-201ENST00000339488 ZNF230Q9UIE0 474 aaPredicted RBP9.04□□□□□ -0.96
PTCHD4-201ENST00000339488 HACL1Q9UJ83 578 aa9.04□□□□□ -0.96
PTCHD4-201ENST00000339488 PPT2Q9UMR5 302 aa9.04□□□□□ -0.96
PTCHD4-201ENST00000339488 GPR52Q9Y2T5 361 aa9.04□□□□□ -0.96
PTCHD4-201ENST00000339488 NME7Q9Y5B8 376 aa9.04□□□□□ -0.96
PTCHD4-201ENST00000339488 TMEM229AB2RXF0 380 aa9.04□□□□□ -0.96
PTCHD4-201ENST00000339488 CLIC1O00299 241 aa9.04□□□□□ -0.96
PTCHD4-201ENST00000339488 TNFRSF10BO14763 440 aa9.04□□□□□ -0.96
PTCHD4-201ENST00000339488 PRKYO43930 277 aa9.04□□□□□ -0.96
PTCHD4-201ENST00000339488 SLC19A2O60779 497 aa9.04□□□□□ -0.96
PTCHD4-201ENST00000339488 KERAO60938 352 aa9.04□□□□□ -0.96
PTCHD4-201ENST00000339488 GJB1P08034 283 aa9.04□□□□□ -0.96
PTCHD4-201ENST00000339488 ST6GAL1P15907 406 aa9.04□□□□□ -0.96
PTCHD4-201ENST00000339488 IL1RNP18510 177 aa9.04□□□□□ -0.96
PTCHD4-201ENST00000339488 FDXRP22570 491 aa9.04□□□□□ -0.96
PTCHD4-201ENST00000339488 S100A3P33764 101 aa9.04□□□□□ -0.96
PTCHD4-201ENST00000339488 PPM1AP35813 382 aa9.04□□□□□ -0.96
PTCHD4-201ENST00000339488 RPL3P39023 403 aaKnown RBP9.04□□□□□ -0.96
PTCHD4-201ENST00000339488 GDF5P43026 501 aa9.04□□□□□ -0.96
PTCHD4-201ENST00000339488 MRPL19P49406 292 aaKnown RBP9.04□□□□□ -0.96
PTCHD4-201ENST00000339488 WNT4P56705 351 aa9.04□□□□□ -0.96
PTCHD4-201ENST00000339488 SLC14A2Q15849 920 aa9.04□□□□□ -0.96
PTCHD4-201ENST00000339488 FAM189A2Q15884 450 aa9.04□□□□□ -0.96
PTCHD4-201ENST00000339488 SLC25A35Q3KQZ1 300 aa9.04□□□□□ -0.96
PTCHD4-201ENST00000339488 EEF1DP3Q658K8 133 aa9.04□□□□□ -0.96
PTCHD4-201ENST00000339488 ZNF385CQ66K41 422 aaPredicted RBP9.04□□□□□ -0.96
PTCHD4-201ENST00000339488 ZC3H14Q6PJT7 736 aaKnown RBP9.04□□□□□ -0.96
PTCHD4-201ENST00000339488 TTLL10Q6ZVT0 673 aa9.04□□□□□ -0.96
PTCHD4-201ENST00000339488 PGAP1Q75T13 922 aa9.04□□□□□ -0.96
PTCHD4-201ENST00000339488 SEMA6DQ8NFY4 1073 aa9.04□□□□□ -0.96
PTCHD4-201ENST00000339488 OR4A4PQ8NGN8 299 aa9.04□□□□□ -0.96
PTCHD4-201ENST00000339488 MED8Q96G25 268 aa9.04□□□□□ -0.96
PTCHD4-201ENST00000339488 TRMT61BQ9BVS5 477 aaKnown RBP9.04□□□□□ -0.96
PTCHD4-201ENST00000339488 NRSN2Q9GZP1 204 aa9.04□□□□□ -0.96
PTCHD4-201ENST00000339488 TKTL2Q9H0I9 626 aa9.04□□□□□ -0.96
PTCHD4-201ENST00000339488 CLMPQ9H6B4 373 aa9.04□□□□□ -0.96
PTCHD4-201ENST00000339488 RNF122Q9H9V4 155 aa9.04□□□□□ -0.96
PTCHD4-201ENST00000339488 RPS10P5Q9NQ39 176 aa9.04□□□□□ -0.96
PTCHD4-201ENST00000339488 CCDC88CQ9P219 2028 aa9.04□□□□□ -0.96
PTCHD4-201ENST00000339488 LRRC37AA6NMS7 1700 aa9.03□□□□□ -0.96
PTCHD4-201ENST00000339488 A0A1B0GW55 424 aa9.03□□□□□ -0.96
PTCHD4-201ENST00000339488 AGPAT2O15120 278 aa9.03□□□□□ -0.96
PTCHD4-201ENST00000339488 DUX4L2P0CJ85 424 aa9.03□□□□□ -0.96
PTCHD4-201ENST00000339488 DUX4L3P0CJ86 424 aa9.03□□□□□ -0.96
PTCHD4-201ENST00000339488 DUX4L4P0CJ87 422 aa9.03□□□□□ -0.96
PTCHD4-201ENST00000339488 DUX4L5P0CJ88 424 aa9.03□□□□□ -0.96
PTCHD4-201ENST00000339488 DUX4L6P0CJ89 424 aa9.03□□□□□ -0.96
PTCHD4-201ENST00000339488 DUX4L7P0CJ90 424 aa9.03□□□□□ -0.96
PTCHD4-201ENST00000339488 S100A2P29034 98 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms