RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 SELENONQ9NZV5 590 aa20.75■□□□□ 0.91
PDLIM2-203ENST00000339162 MKL2Q9ULH7 1088 aa20.75■□□□□ 0.91
PDLIM2-203ENST00000339162 MMACHCQ9Y4U1 282 aa20.75■□□□□ 0.91
PDLIM2-203ENST00000339162 IGKV3D-11A0A0A0MRZ8 115 aa20.74■□□□□ 0.91
PDLIM2-203ENST00000339162 FADS2O95864 444 aaKnown RBP20.74■□□□□ 0.91
PDLIM2-203ENST00000339162 RHAGQ02094 409 aa20.74■□□□□ 0.91
PDLIM2-203ENST00000339162 NSDHLQ15738 373 aa20.74■□□□□ 0.91
PDLIM2-203ENST00000339162 GTF2IRD2BQ6EKJ0 949 aa20.74■□□□□ 0.91
PDLIM2-203ENST00000339162 GTF2IRD2Q86UP8 949 aa20.74■□□□□ 0.91
PDLIM2-203ENST00000339162 NRMQ8IXM6 262 aa20.74■□□□□ 0.91
PDLIM2-203ENST00000339162 IFI44Q8TCB0 444 aa20.74■□□□□ 0.91
PDLIM2-203ENST00000339162 ZFAND2BQ8WV99 257 aa20.74■□□□□ 0.91
PDLIM2-203ENST00000339162 CCDC74BQ96LY2 380 aa20.74■□□□□ 0.91
PDLIM2-203ENST00000339162 PLA2G12AQ9BZM1 189 aa20.74■□□□□ 0.91
PDLIM2-203ENST00000339162 CBLCQ9ULV8 474 aa20.74■□□□□ 0.91
PDLIM2-203ENST00000339162 CLCA3PQ9Y6N3 262 aa20.74■□□□□ 0.91
PDLIM2-203ENST00000339162 ARHGAP33O14559 1287 aa20.74■□□□□ 0.91
PDLIM2-203ENST00000339162 TOX3O15405 576 aaPredicted RBP20.74■□□□□ 0.91
PDLIM2-203ENST00000339162 RGS10O43665 173 aa20.74■□□□□ 0.91
PDLIM2-203ENST00000339162 OR5F1O95221 314 aa20.74■□□□□ 0.91
PDLIM2-203ENST00000339162 DAB2P98082 770 aa20.74■□□□□ 0.91
PDLIM2-203ENST00000339162 ALDH6A1Q02252 535 aaKnown RBP20.74■□□□□ 0.91
PDLIM2-203ENST00000339162 FAAH2Q6GMR7 532 aa20.74■□□□□ 0.91
PDLIM2-203ENST00000339162 B3GNT6Q6ZMB0 384 aa20.74■□□□□ 0.91
PDLIM2-203ENST00000339162 QSOX2Q6ZRP7 698 aa20.74■□□□□ 0.91
PDLIM2-203ENST00000339162 KIF18BQ86Y91 864 aa20.74■□□□□ 0.91
PDLIM2-203ENST00000339162 LINC00471Q8N535 108 aa20.74■□□□□ 0.91
PDLIM2-203ENST00000339162 BCORP1Q8N888 145 aa20.74■□□□□ 0.91
PDLIM2-203ENST00000339162 OR4D9Q8NGE8 314 aa20.74■□□□□ 0.91
PDLIM2-203ENST00000339162 ZNF578Q96N58 590 aaPredicted RBP20.74■□□□□ 0.91
PDLIM2-203ENST00000339162 SH3GL3Q99963 347 aa20.74■□□□□ 0.91
PDLIM2-203ENST00000339162 POLE3Q9NRF9 147 aa20.74■□□□□ 0.91
PDLIM2-203ENST00000339162 GPR83Q9NYM4 423 aa20.74■□□□□ 0.91
PDLIM2-203ENST00000339162 COMMD3-BMI1R4GMX3 469 aa20.74■□□□□ 0.91
PDLIM2-203ENST00000339162 ADAM11O75078 769 aa20.73■□□□□ 0.91
PDLIM2-203ENST00000339162 C21orf33P30042 268 aaPredicted RBP20.73■□□□□ 0.91
PDLIM2-203ENST00000339162 GPR4P46093 362 aa20.73■□□□□ 0.91
PDLIM2-203ENST00000339162 MASP1P48740 699 aa20.73■□□□□ 0.91
PDLIM2-203ENST00000339162 SLC37A1P57057 533 aa20.73■□□□□ 0.91
PDLIM2-203ENST00000339162 ROR2Q01974 943 aaKnown RBP20.73■□□□□ 0.91
PDLIM2-203ENST00000339162 OR1Q1Q15612 314 aa20.73■□□□□ 0.91
PDLIM2-203ENST00000339162 FAR1Q8WVX9 515 aa20.73■□□□□ 0.91
PDLIM2-203ENST00000339162 ACOT11Q8WXI4 607 aaPredicted RBP20.73■□□□□ 0.91
PDLIM2-203ENST00000339162 NR4A3Q92570 626 aa20.73■□□□□ 0.91
PDLIM2-203ENST00000339162 ATOH1Q92858 354 aaPredicted RBP20.73■□□□□ 0.91
PDLIM2-203ENST00000339162 EFHD2Q96C19 240 aaPredicted RBP20.73■□□□□ 0.91
PDLIM2-203ENST00000339162 PELOQ9BRX2 385 aaKnown RBP20.73■□□□□ 0.91
PDLIM2-203ENST00000339162 SLC22A11Q9NSA0 550 aa20.73■□□□□ 0.91
PDLIM2-203ENST00000339162 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.73■□□□□ 0.91
PDLIM2-203ENST00000339162 SEC14L2O76054 403 aa20.73■□□□□ 0.91
PDLIM2-203ENST00000339162 OMPP47874 163 aa20.73■□□□□ 0.91
PDLIM2-203ENST00000339162 SQSTM1Q13501 440 aa20.73■□□□□ 0.91
PDLIM2-203ENST00000339162 TCEAL6Q6IPX3 200 aa20.73■□□□□ 0.91
PDLIM2-203ENST00000339162 WDR88Q6ZMY6 472 aa20.73■□□□□ 0.91
PDLIM2-203ENST00000339162 ZSCAN1Q8NBB4 408 aa20.73■□□□□ 0.91
PDLIM2-203ENST00000339162 OR4C3Q8NH37 302 aa20.73■□□□□ 0.91
PDLIM2-203ENST00000339162 GGHQ92820 318 aa20.73■□□□□ 0.91
PDLIM2-203ENST00000339162 TCEAL3Q969E4 200 aa20.73■□□□□ 0.91
PDLIM2-203ENST00000339162 TUBA1CQ9BQE3 449 aa20.73■□□□□ 0.91
PDLIM2-203ENST00000339162 COPS4Q9BT78 406 aa20.73■□□□□ 0.91
PDLIM2-203ENST00000339162 VN1R1Q9GZP7 353 aa20.73■□□□□ 0.91
PDLIM2-203ENST00000339162 COX10Q12887 443 aa20.72■□□□□ 0.91
PDLIM2-203ENST00000339162 DECR1Q16698 335 aa20.72■□□□□ 0.91
PDLIM2-203ENST00000339162 NDUFAF6Q330K2 333 aa20.72■□□□□ 0.91
PDLIM2-203ENST00000339162 SLX4IPQ5VYV7 408 aa20.72■□□□□ 0.91
PDLIM2-203ENST00000339162 PWWP2BQ6NUJ5 590 aa20.72■□□□□ 0.91
PDLIM2-203ENST00000339162 CD300LDQ6UXZ3 194 aa20.72■□□□□ 0.91
PDLIM2-203ENST00000339162 BCDIN3DQ7Z5W3 292 aaKnown RBP20.72■□□□□ 0.91
PDLIM2-203ENST00000339162 SLC2A12Q8TD20 617 aa20.72■□□□□ 0.91
PDLIM2-203ENST00000339162 NAT6Q93015 286 aa20.72■□□□□ 0.91
PDLIM2-203ENST00000339162 MUL1Q969V5 352 aa20.72■□□□□ 0.91
PDLIM2-203ENST00000339162 C12orf43Q96C57 262 aaKnown RBP20.72■□□□□ 0.91
PDLIM2-203ENST00000339162 MPP4Q96JB8 637 aa20.72■□□□□ 0.91
PDLIM2-203ENST00000339162 PRSS27Q9BQR3 290 aa20.72■□□□□ 0.91
PDLIM2-203ENST00000339162 PSORS1C1Q9UIG5 152 aa20.72■□□□□ 0.91
PDLIM2-203ENST00000339162 FBXO4Q9UKT5 387 aa20.72■□□□□ 0.91
PDLIM2-203ENST00000339162 YKT6O15498 198 aa20.72■□□□□ 0.91
PDLIM2-203ENST00000339162 GDF9O60383 454 aa20.72■□□□□ 0.91
PDLIM2-203ENST00000339162 GALNSP34059 522 aa20.72■□□□□ 0.91
PDLIM2-203ENST00000339162 GP2P55259 537 aaKnown RBP20.72■□□□□ 0.91
PDLIM2-203ENST00000339162 GINS1Q14691 196 aa20.72■□□□□ 0.91
PDLIM2-203ENST00000339162 C11orf91Q3C1V1 193 aa20.72■□□□□ 0.91
PDLIM2-203ENST00000339162 PHF19Q5T6S3 580 aa20.72■□□□□ 0.91
PDLIM2-203ENST00000339162 ACSM5Q6NUN0 579 aa20.72■□□□□ 0.91
PDLIM2-203ENST00000339162 COX15Q7KZN9 410 aa20.72■□□□□ 0.91
PDLIM2-203ENST00000339162 CEP76Q8TAP6 659 aa20.72■□□□□ 0.91
PDLIM2-203ENST00000339162 PIGXQ8TBF5 258 aa20.72■□□□□ 0.91
PDLIM2-203ENST00000339162 GRHL3Q8TE85 626 aa20.72■□□□□ 0.91
PDLIM2-203ENST00000339162 MESP1Q9BRJ9 268 aa20.72■□□□□ 0.91
PDLIM2-203ENST00000339162 ANKRD19PQ9H560 264 aa20.72■□□□□ 0.91
PDLIM2-203ENST00000339162 APMAPQ9HDC9 416 aa20.72■□□□□ 0.91
PDLIM2-203ENST00000339162 TVP23BQ9NYZ1 205 aa20.72■□□□□ 0.91
PDLIM2-203ENST00000339162 PRODH2Q9UF12 536 aa20.72■□□□□ 0.91
PDLIM2-203ENST00000339162 WARS2Q9UGM6 360 aaKnown RBP20.72■□□□□ 0.91
PDLIM2-203ENST00000339162 TCRBV16S1A1N1A0A5B0 115 aa20.71■□□□□ 0.91
PDLIM2-203ENST00000339162 TRAPPC13A5PLN9 417 aa20.71■□□□□ 0.91
PDLIM2-203ENST00000339162 TMX2-CTNND1H3BSU7 103 aa20.71■□□□□ 0.91
PDLIM2-203ENST00000339162 SOX30O94993 753 aa20.71■□□□□ 0.91
PDLIM2-203ENST00000339162 CER1O95813 267 aa20.71■□□□□ 0.91
PDLIM2-203ENST00000339162 DDAH2O95865 285 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms