RNA–Protein interactions for RNA: ENST00000338962.8

LRP1-202, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,169 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-202ENST00000338962 SLC35F3Q8IY50 421 aa10.29□□□□□ -0.76
LRP1-202ENST00000338962 EID2Q8N6I1 236 aa10.29□□□□□ -0.76
LRP1-202ENST00000338962 LSM14AQ8ND56 463 aaKnown RBP10.29□□□□□ -0.76
LRP1-202ENST00000338962 YIPF6Q96EC8 236 aa10.29□□□□□ -0.76
LRP1-202ENST00000338962 RBM18Q96H35 190 aaKnown RBP10.29□□□□□ -0.76
LRP1-202ENST00000338962 PEX11GQ96HA9 241 aa10.29□□□□□ -0.76
LRP1-202ENST00000338962 MCHR1Q99705 422 aa10.29□□□□□ -0.76
LRP1-202ENST00000338962 PDE7BQ9NP56 450 aa10.29□□□□□ -0.76
LRP1-202ENST00000338962 INIPQ9NRY2 104 aa10.29□□□□□ -0.76
LRP1-202ENST00000338962 PLCL2Q9UPR0 1127 aa10.29□□□□□ -0.76
LRP1-202ENST00000338962 U3KQA8 63 aa10.29□□□□□ -0.76
LRP1-202ENST00000338962 HYKKA2RU49 373 aa10.29□□□□□ -0.76
LRP1-202ENST00000338962 KPNA4O00629 521 aaPredicted RBP10.29□□□□□ -0.76
LRP1-202ENST00000338962 CLDN4O14493 209 aa10.29□□□□□ -0.76
LRP1-202ENST00000338962 TM4SF5O14894 197 aa10.29□□□□□ -0.76
LRP1-202ENST00000338962 MAGEB3O15480 346 aa10.29□□□□□ -0.76
LRP1-202ENST00000338962 NUDT21O43809 227 aaKnown RBP10.29□□□□□ -0.76
LRP1-202ENST00000338962 CNOT3O75175 753 aaKnown RBP10.29□□□□□ -0.76
LRP1-202ENST00000338962 NSA2O95478 260 aaKnown RBP10.29□□□□□ -0.76
LRP1-202ENST00000338962 INHBBP09529 407 aa10.29□□□□□ -0.76
LRP1-202ENST00000338962 CD36P16671 472 aa10.29□□□□□ -0.76
LRP1-202ENST00000338962 GABRA3P34903 492 aa10.29□□□□□ -0.76
LRP1-202ENST00000338962 EEF1A1P68104 462 aaKnown RBP10.29□□□□□ -0.76
LRP1-202ENST00000338962 ZNF846Q147U1 533 aa10.29□□□□□ -0.76
LRP1-202ENST00000338962 NR1D2Q14995 579 aa10.29□□□□□ -0.76
LRP1-202ENST00000338962 TIGD6Q17RP2 521 aa10.29□□□□□ -0.76
LRP1-202ENST00000338962 EXOSC6Q5RKV6 272 aaKnown RBP10.29□□□□□ -0.76
LRP1-202ENST00000338962 TMEM53Q6P2H8 277 aa10.29□□□□□ -0.76
LRP1-202ENST00000338962 FIGNL1Q6PIW4 674 aa10.29□□□□□ -0.76
LRP1-202ENST00000338962 RANBP3LQ86VV4 465 aaPredicted RBP10.29□□□□□ -0.76
LRP1-202ENST00000338962 ZNF595Q8IYB9 648 aa10.29□□□□□ -0.76
LRP1-202ENST00000338962 IQCF1Q8N6M8 205 aa10.29□□□□□ -0.76
LRP1-202ENST00000338962 OR6C4Q8NGE1 309 aa10.29□□□□□ -0.76
LRP1-202ENST00000338962 OR52R1Q8NGF1 315 aa10.29□□□□□ -0.76
LRP1-202ENST00000338962 PIGXQ8TBF5 258 aa10.29□□□□□ -0.76
LRP1-202ENST00000338962 ADAMTS18Q8TE60 1221 aa10.29□□□□□ -0.76
LRP1-202ENST00000338962 CHPT1Q8WUD6 406 aa10.29□□□□□ -0.76
LRP1-202ENST00000338962 ACOT11Q8WXI4 607 aaPredicted RBP10.29□□□□□ -0.76
LRP1-202ENST00000338962 RIT1Q92963 219 aa10.29□□□□□ -0.76
LRP1-202ENST00000338962 ZDHHC12Q96GR4 267 aa10.29□□□□□ -0.76
LRP1-202ENST00000338962 GPA33Q99795 319 aa10.29□□□□□ -0.76
LRP1-202ENST00000338962 NECTIN3Q9NQS3 549 aa10.29□□□□□ -0.76
LRP1-202ENST00000338962 KLHL3Q9UH77 587 aa10.29□□□□□ -0.76
LRP1-202ENST00000338962 ZFHX2Q9C0A1 2572 aaPredicted RBP10.28□□□□□ -0.76
LRP1-202ENST00000338962 IGHV5-51A0A0C4DH38 117 aa10.28□□□□□ -0.76
LRP1-202ENST00000338962 CENPVL1A0A0U1RR11 272 aa10.28□□□□□ -0.76
LRP1-202ENST00000338962 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.28□□□□□ -0.76
LRP1-202ENST00000338962 BLACEA4D250 179 aa10.28□□□□□ -0.76
LRP1-202ENST00000338962 FOXS1O43638 330 aa10.28□□□□□ -0.76
LRP1-202ENST00000338962 KIAA0513O60268 411 aa10.28□□□□□ -0.76
LRP1-202ENST00000338962 ENTPD6O75354 484 aa10.28□□□□□ -0.76
LRP1-202ENST00000338962 OR5F1O95221 314 aa10.28□□□□□ -0.76
LRP1-202ENST00000338962 MED26O95402 600 aa10.28□□□□□ -0.76
LRP1-202ENST00000338962 TP53P04637 393 aaPredicted RBP10.28□□□□□ -0.76
LRP1-202ENST00000338962 ADORA3P0DMS8 318 aa10.28□□□□□ -0.76
LRP1-202ENST00000338962 CKMT1AP12532 417 aa10.28□□□□□ -0.76
LRP1-202ENST00000338962 NID1P14543 1247 aa10.28□□□□□ -0.76
LRP1-202ENST00000338962 PNLIPP16233 465 aa10.28□□□□□ -0.76
LRP1-202ENST00000338962 GLB1P16278 677 aa10.28□□□□□ -0.76
LRP1-202ENST00000338962 GIPRP48546 466 aa10.28□□□□□ -0.76
LRP1-202ENST00000338962 SMSP52788 366 aa10.28□□□□□ -0.76
LRP1-202ENST00000338962 LSM3P62310 102 aaKnown RBP10.28□□□□□ -0.76
LRP1-202ENST00000338962 POU6F2P78424 691 aaPredicted RBP10.28□□□□□ -0.76
LRP1-202ENST00000338962 MAT1AQ00266 395 aaKnown RBP10.28□□□□□ -0.76
LRP1-202ENST00000338962 GINS1Q14691 196 aa10.28□□□□□ -0.76
LRP1-202ENST00000338962 ZNHIT3Q15649 155 aaPredicted RBP10.28□□□□□ -0.76
LRP1-202ENST00000338962 SYT16Q17RD7 645 aa10.28□□□□□ -0.76
LRP1-202ENST00000338962 TCTE1Q5JU00 501 aa10.28□□□□□ -0.76
LRP1-202ENST00000338962 GARNL3Q5VVW2 1013 aa10.28□□□□□ -0.76
LRP1-202ENST00000338962 DCDC5Q6ZRR9 648 aa10.28□□□□□ -0.76
LRP1-202ENST00000338962 NAXDQ8IW45 347 aa10.28□□□□□ -0.76
LRP1-202ENST00000338962 TCEANCQ8N8B7 351 aa10.28□□□□□ -0.76
LRP1-202ENST00000338962 MINDY2Q8NBR6 621 aa10.28□□□□□ -0.76
LRP1-202ENST00000338962 TOR1AIP2Q8NFQ8 470 aa10.28□□□□□ -0.76
LRP1-202ENST00000338962 C9orf43Q8TAL5 461 aaPredicted RBP10.28□□□□□ -0.76
LRP1-202ENST00000338962 TEX47Q8TBZ9 253 aa10.28□□□□□ -0.76
LRP1-202ENST00000338962 RHBDD1Q8TEB9 315 aa10.28□□□□□ -0.76
LRP1-202ENST00000338962 S100ZQ8WXG8 99 aa10.28□□□□□ -0.76
LRP1-202ENST00000338962 SLC41A3Q96GZ6 507 aa10.28□□□□□ -0.76
LRP1-202ENST00000338962 FAM46AQ96IP4 442 aaKnown RBP10.28□□□□□ -0.76
LRP1-202ENST00000338962 WDR12Q9GZL7 423 aaKnown RBP10.28□□□□□ -0.76
LRP1-202ENST00000338962 SAP130Q9H0E3 1048 aa10.28□□□□□ -0.76
LRP1-202ENST00000338962 ARMC7Q9H6L4 198 aa10.28□□□□□ -0.76
LRP1-202ENST00000338962 HMG20AQ9NP66 347 aa10.28□□□□□ -0.76
LRP1-202ENST00000338962 TVP23BQ9NYZ1 205 aa10.28□□□□□ -0.76
LRP1-202ENST00000338962 DNAJC27Q9NZQ0 273 aa10.28□□□□□ -0.76
LRP1-202ENST00000338962 CNIH4Q9P003 139 aa10.28□□□□□ -0.76
LRP1-202ENST00000338962 EPHA6Q9UF33 1036 aa10.28□□□□□ -0.76
LRP1-202ENST00000338962 SPTBP11277 2137 aa10.28□□□□□ -0.76
LRP1-202ENST00000338962 TMEM131Q92545 1883 aa10.28□□□□□ -0.76
LRP1-202ENST00000338962 RIF1Q5UIP0 2472 aaKnown RBP10.28□□□□□ -0.76
LRP1-202ENST00000338962 M0R3G1 203 aa10.28□□□□□ -0.76
LRP1-202ENST00000338962 PEX12O00623 359 aa10.28□□□□□ -0.76
LRP1-202ENST00000338962 CTNSO60931 367 aa10.28□□□□□ -0.76
LRP1-202ENST00000338962 SOX30O94993 753 aa10.28□□□□□ -0.76
LRP1-202ENST00000338962 CBX7O95931 251 aa10.28□□□□□ -0.76
LRP1-202ENST00000338962 PIPP12273 146 aaPredicted RBP10.28□□□□□ -0.76
LRP1-202ENST00000338962 RPS4Y1P22090 263 aaKnown RBP10.28□□□□□ -0.76
LRP1-202ENST00000338962 MAP3K8P41279 467 aa10.28□□□□□ -0.76
LRP1-202ENST00000338962 RFX3P48380 749 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms