RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 DBIP07108 87 aaKnown RBP10.88□□□□□ -0.67
SPTLC1-202ENST00000337841 NUDT7P0C024 238 aa10.88□□□□□ -0.67
SPTLC1-202ENST00000337841 NPIPA8P0DM63 369 aa10.88□□□□□ -0.67
SPTLC1-202ENST00000337841 ARAFP10398 606 aa10.88□□□□□ -0.67
SPTLC1-202ENST00000337841 MSX1P28360 303 aa10.88□□□□□ -0.67
SPTLC1-202ENST00000337841 RFC3P40938 356 aa10.88□□□□□ -0.67
SPTLC1-202ENST00000337841 CPA2P48052 419 aa10.88□□□□□ -0.67
SPTLC1-202ENST00000337841 GAS1P54826 345 aa10.88□□□□□ -0.67
SPTLC1-202ENST00000337841 PSME3P61289 254 aa10.88□□□□□ -0.67
SPTLC1-202ENST00000337841 PMP22Q01453 160 aa10.88□□□□□ -0.67
SPTLC1-202ENST00000337841 SELPLGQ14242 412 aa10.88□□□□□ -0.67
SPTLC1-202ENST00000337841 TOMM20Q15388 145 aa10.88□□□□□ -0.67
SPTLC1-202ENST00000337841 RABL3Q5HYI8 236 aa10.88□□□□□ -0.67
SPTLC1-202ENST00000337841 REEP3Q6NUK4 255 aa10.88□□□□□ -0.67
SPTLC1-202ENST00000337841 APOOLQ6UXV4 268 aa10.88□□□□□ -0.67
SPTLC1-202ENST00000337841 FRRS1Q6ZNA5 592 aa10.88□□□□□ -0.67
SPTLC1-202ENST00000337841 PRICKLE2Q7Z3G6 844 aa10.88□□□□□ -0.67
SPTLC1-202ENST00000337841 KRT73Q86Y46 540 aa10.88□□□□□ -0.67
SPTLC1-202ENST00000337841 SLC30A8Q8IWU4 369 aa10.88□□□□□ -0.67
SPTLC1-202ENST00000337841 ZNF614Q8N883 585 aa10.88□□□□□ -0.67
SPTLC1-202ENST00000337841 OR4K17Q8NGC6 315 aa10.88□□□□□ -0.67
SPTLC1-202ENST00000337841 BBS10Q8TAM1 723 aa10.88□□□□□ -0.67
SPTLC1-202ENST00000337841 PHOSPHO1Q8TCT1 267 aa10.88□□□□□ -0.67
SPTLC1-202ENST00000337841 MAL2Q969L2 176 aa10.88□□□□□ -0.67
SPTLC1-202ENST00000337841 TMEM19Q96HH6 336 aa10.88□□□□□ -0.67
SPTLC1-202ENST00000337841 GNRHR2Q96P88 292 aa10.88□□□□□ -0.67
SPTLC1-202ENST00000337841 TREX2Q9BQ50 279 aaPredicted RBP10.88□□□□□ -0.67
SPTLC1-202ENST00000337841 GPATCH1Q9BRR8 931 aaKnown RBP10.88□□□□□ -0.67
SPTLC1-202ENST00000337841 SLC38A1Q9H2H9 487 aa10.88□□□□□ -0.67
SPTLC1-202ENST00000337841 PIEZO2Q9H5I5 2752 aa10.88□□□□□ -0.67
SPTLC1-202ENST00000337841 ARMC7Q9H6L4 198 aa10.88□□□□□ -0.67
SPTLC1-202ENST00000337841 PTGES2Q9H7Z7 377 aa10.88□□□□□ -0.67
SPTLC1-202ENST00000337841 BCL2L10Q9HD36 194 aa10.88□□□□□ -0.67
SPTLC1-202ENST00000337841 QPCTLQ9NXS2 382 aa10.88□□□□□ -0.67
SPTLC1-202ENST00000337841 RALYQ9UKM9 306 aaKnown RBP10.88□□□□□ -0.67
SPTLC1-202ENST00000337841 NPIPA1Q9UND3 350 aa10.88□□□□□ -0.67
SPTLC1-202ENST00000337841 IFT52Q9Y366 437 aa10.88□□□□□ -0.67
SPTLC1-202ENST00000337841 LAMA5O15230 3695 aa10.88□□□□□ -0.67
SPTLC1-202ENST00000337841 NUP214P35658 2090 aaPredicted RBP10.88□□□□□ -0.67
SPTLC1-202ENST00000337841 ITPR1Q14643 2758 aa10.88□□□□□ -0.67
SPTLC1-202ENST00000337841 AGAP5A6NIR3 686 aa10.87□□□□□ -0.67
SPTLC1-202ENST00000337841 CCT8L1PA6NM43 557 aa10.87□□□□□ -0.67
SPTLC1-202ENST00000337841 FAM166BA8MTA8 275 aa10.87□□□□□ -0.67
SPTLC1-202ENST00000337841 B2RBV5 119 aa10.87□□□□□ -0.67
SPTLC1-202ENST00000337841 KIAA0513O60268 411 aa10.87□□□□□ -0.67
SPTLC1-202ENST00000337841 SERPINB7O75635 380 aa10.87□□□□□ -0.67
SPTLC1-202ENST00000337841 UGT2B17O75795 530 aa10.87□□□□□ -0.67
SPTLC1-202ENST00000337841 TRAPPC6AO75865 159 aa10.87□□□□□ -0.67
SPTLC1-202ENST00000337841 PGM3O95394 542 aa10.87□□□□□ -0.67
SPTLC1-202ENST00000337841 CHRM4P08173 479 aa10.87□□□□□ -0.67
SPTLC1-202ENST00000337841 IL7RP16871 459 aa10.87□□□□□ -0.67
SPTLC1-202ENST00000337841 CALB2P22676 271 aa10.87□□□□□ -0.67
SPTLC1-202ENST00000337841 GDF1P27539 372 aa10.87□□□□□ -0.67
SPTLC1-202ENST00000337841 ADH7P40394 386 aa10.87□□□□□ -0.67
SPTLC1-202ENST00000337841 CBX1P83916 185 aa10.87□□□□□ -0.67
SPTLC1-202ENST00000337841 FUT5Q11128 374 aa10.87□□□□□ -0.67
SPTLC1-202ENST00000337841 SCARB2Q14108 478 aa10.87□□□□□ -0.67
SPTLC1-202ENST00000337841 LARS2Q15031 903 aaKnown RBP10.87□□□□□ -0.67
SPTLC1-202ENST00000337841 ZSWIM7Q19AV6 140 aa10.87□□□□□ -0.67
SPTLC1-202ENST00000337841 PDZK1Q5T2W1 519 aa10.87□□□□□ -0.67
SPTLC1-202ENST00000337841 INTS11Q5TA45 600 aaKnown RBP10.87□□□□□ -0.67
SPTLC1-202ENST00000337841 OR5M10Q6IEU7 315 aa10.87□□□□□ -0.67
SPTLC1-202ENST00000337841 ERICH5Q6P6B1 374 aa10.87□□□□□ -0.67
SPTLC1-202ENST00000337841 C16orf89Q6UX73 402 aa10.87□□□□□ -0.67
SPTLC1-202ENST00000337841 EIF3MQ7L2H7 374 aaKnown RBP10.87□□□□□ -0.67
SPTLC1-202ENST00000337841 OLIG3Q7RTU3 272 aa10.87□□□□□ -0.67
SPTLC1-202ENST00000337841 NET1Q7Z628 596 aaPredicted RBP10.87□□□□□ -0.67
SPTLC1-202ENST00000337841 CMIPQ8IY22 773 aa10.87□□□□□ -0.67
SPTLC1-202ENST00000337841 SLC15A3Q8IY34 581 aa10.87□□□□□ -0.67
SPTLC1-202ENST00000337841 FAM109AQ8N4B1 249 aa10.87□□□□□ -0.67
SPTLC1-202ENST00000337841 TMEM251Q8N6I4 163 aa10.87□□□□□ -0.67
SPTLC1-202ENST00000337841 WDSUB1Q8N9V3 476 aa10.87□□□□□ -0.67
SPTLC1-202ENST00000337841 HIPK4Q8NE63 616 aa10.87□□□□□ -0.67
SPTLC1-202ENST00000337841 OR52P1PQ8NH57 321 aa10.87□□□□□ -0.67
SPTLC1-202ENST00000337841 NFKBIDQ8NI38 313 aa10.87□□□□□ -0.67
SPTLC1-202ENST00000337841 NR4A3Q92570 626 aa10.87□□□□□ -0.67
SPTLC1-202ENST00000337841 ZG16BQ96DA0 208 aa10.87□□□□□ -0.67
SPTLC1-202ENST00000337841 ZNF607Q96SK3 696 aa10.87□□□□□ -0.67
SPTLC1-202ENST00000337841 SPATA5L1Q9BVQ7 753 aa10.87□□□□□ -0.67
SPTLC1-202ENST00000337841 TRIM8Q9BZR9 551 aa10.87□□□□□ -0.67
SPTLC1-202ENST00000337841 DEFB127Q9H1M4 99 aa10.87□□□□□ -0.67
SPTLC1-202ENST00000337841 DSN1Q9H410 356 aa10.87□□□□□ -0.67
SPTLC1-202ENST00000337841 PIF1Q9H611 641 aa10.87□□□□□ -0.67
SPTLC1-202ENST00000337841 ANGPT4Q9Y264 503 aa10.87□□□□□ -0.67
SPTLC1-202ENST00000337841 NTNG1Q9Y2I2 539 aa10.87□□□□□ -0.67
SPTLC1-202ENST00000337841 C15orf41Q9Y2V0 281 aa10.87□□□□□ -0.67
SPTLC1-202ENST00000337841 KMT2BQ9UMN6 2715 aaPredicted RBP10.87□□□□□ -0.67
SPTLC1-202ENST00000337841 TNRC6AQ8NDV7 1962 aaKnown RBP10.86□□□□□ -0.67
SPTLC1-202ENST00000337841 IGLV3-32A0A0A0MS00 114 aa10.86□□□□□ -0.67
SPTLC1-202ENST00000337841 LRRC3CA6NJW4 275 aa10.86□□□□□ -0.67
SPTLC1-202ENST00000337841 FAM47E-STBD1D6RA91 191 aa10.86□□□□□ -0.67
SPTLC1-202ENST00000337841 HCRTR2O43614 444 aa10.86□□□□□ -0.67
SPTLC1-202ENST00000337841 EIF4E2O60573 245 aaKnown RBP10.86□□□□□ -0.67
SPTLC1-202ENST00000337841 PDE9AO76083 593 aa10.86□□□□□ -0.67
SPTLC1-202ENST00000337841 CBX6O95503 412 aa10.86□□□□□ -0.67
SPTLC1-202ENST00000337841 CSTAP01040 98 aa10.86□□□□□ -0.67
SPTLC1-202ENST00000337841 RFPL3SP0C7P2 107 aa10.86□□□□□ -0.67
SPTLC1-202ENST00000337841 ETS2P15036 469 aa10.86□□□□□ -0.67
SPTLC1-202ENST00000337841 GCKP35557 465 aa10.86□□□□□ -0.67
SPTLC1-202ENST00000337841 GZMMP51124 257 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms