RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 LSM7Q9UK45 103 aaKnown RBP11.14□□□□□ -0.63
LIMK2-202ENST00000333611 RPL36Q9Y3U8 105 aaKnown RBP11.14□□□□□ -0.63
LIMK2-202ENST00000333611 YIPF1Q9Y548 306 aa11.14□□□□□ -0.63
LIMK2-202ENST00000333611 A0A1B0GVI7 797 aa11.14□□□□□ -0.63
LIMK2-202ENST00000333611 GLTPD2A6NH11 291 aa11.14□□□□□ -0.63
LIMK2-202ENST00000333611 WRBO00258 174 aa11.14□□□□□ -0.63
LIMK2-202ENST00000333611 AGPAT2O15120 278 aa11.14□□□□□ -0.63
LIMK2-202ENST00000333611 PDHA2P29803 388 aa11.14□□□□□ -0.63
LIMK2-202ENST00000333611 CTNNB1P35222 781 aa11.14□□□□□ -0.63
LIMK2-202ENST00000333611 ETV5P41161 510 aa11.14□□□□□ -0.63
LIMK2-202ENST00000333611 PCP4P48539 62 aa11.14□□□□□ -0.63
LIMK2-202ENST00000333611 EVX1P49640 407 aa11.14□□□□□ -0.63
LIMK2-202ENST00000333611 MVDP53602 400 aa11.14□□□□□ -0.63
LIMK2-202ENST00000333611 SNRPD1P62314 119 aaKnown RBP11.14□□□□□ -0.63
LIMK2-202ENST00000333611 PLA2G7Q13093 441 aa11.14□□□□□ -0.63
LIMK2-202ENST00000333611 SKP2Q13309 424 aa11.14□□□□□ -0.63
LIMK2-202ENST00000333611 SNTB1Q13884 538 aaKnown RBP11.14□□□□□ -0.63
LIMK2-202ENST00000333611 ANXA8L1Q5VT79 327 aa11.14□□□□□ -0.63
LIMK2-202ENST00000333611 GSG1LQ6UXU4 331 aa11.14□□□□□ -0.63
LIMK2-202ENST00000333611 TPRG1Q6ZUI0 275 aa11.14□□□□□ -0.63
LIMK2-202ENST00000333611 ZNF740Q8NDX6 193 aa11.14□□□□□ -0.63
LIMK2-202ENST00000333611 NEIL2Q969S2 332 aa11.14□□□□□ -0.63
LIMK2-202ENST00000333611 RIOK2Q9BVS4 552 aaKnown RBP11.14□□□□□ -0.63
LIMK2-202ENST00000333611 POLR2J3Q9H1A7 115 aaKnown RBP11.14□□□□□ -0.63
LIMK2-202ENST00000333611 SUV39H2Q9H5I1 410 aa11.14□□□□□ -0.63
LIMK2-202ENST00000333611 RDH14Q9HBH5 336 aa11.14□□□□□ -0.63
LIMK2-202ENST00000333611 ASIC5Q9NY37 505 aa11.14□□□□□ -0.63
LIMK2-202ENST00000333611 SLCO1C1Q9NYB5 712 aa11.14□□□□□ -0.63
LIMK2-202ENST00000333611 DHCR7Q9UBM7 475 aaKnown RBP11.14□□□□□ -0.63
LIMK2-202ENST00000333611 NDRG3Q9UGV2 375 aa11.14□□□□□ -0.63
LIMK2-202ENST00000333611 IL20RAQ9UHF4 553 aa11.14□□□□□ -0.63
LIMK2-202ENST00000333611 PLAGL1Q9UM63 463 aa11.14□□□□□ -0.63
LIMK2-202ENST00000333611 LOC100509620A0A075B734 347 aa11.13□□□□□ -0.63
LIMK2-202ENST00000333611 KCNE1BA0A087WTH5 132 aa11.13□□□□□ -0.63
LIMK2-202ENST00000333611 GCM2O75603 506 aaPredicted RBP11.13□□□□□ -0.63
LIMK2-202ENST00000333611 CATP04040 527 aaKnown RBP11.13□□□□□ -0.63
LIMK2-202ENST00000333611 ALPPL2P10696 532 aa11.13□□□□□ -0.63
LIMK2-202ENST00000333611 NQO2P16083 231 aa11.13□□□□□ -0.63
LIMK2-202ENST00000333611 PAICSP22234 425 aaKnown RBP11.13□□□□□ -0.63
LIMK2-202ENST00000333611 IDSP22304 550 aa11.13□□□□□ -0.63
LIMK2-202ENST00000333611 S100PP25815 95 aa11.13□□□□□ -0.63
LIMK2-202ENST00000333611 GABRR2P28476 465 aa11.13□□□□□ -0.63
LIMK2-202ENST00000333611 VEZF1Q14119 521 aa11.13□□□□□ -0.63
LIMK2-202ENST00000333611 FAM27D1Q5T7N8 215 aa11.13□□□□□ -0.63
LIMK2-202ENST00000333611 CEACAM20Q6UY09 585 aa11.13□□□□□ -0.63
LIMK2-202ENST00000333611 TSEN54Q7Z6J9 526 aaKnown RBP11.13□□□□□ -0.63
LIMK2-202ENST00000333611 CACUL1Q86Y37 369 aa11.13□□□□□ -0.63
LIMK2-202ENST00000333611 TRAPPC5Q8IUR0 188 aa11.13□□□□□ -0.63
LIMK2-202ENST00000333611 WDFY2Q96P53 400 aa11.13□□□□□ -0.63
LIMK2-202ENST00000333611 OR2M2Q96R28 347 aa11.13□□□□□ -0.63
LIMK2-202ENST00000333611 YIPF4Q9BSR8 244 aa11.13□□□□□ -0.63
LIMK2-202ENST00000333611 WRAP53Q9BUR4 548 aaKnown RBP11.13□□□□□ -0.63
LIMK2-202ENST00000333611 PINK1Q9BXM7 581 aa11.13□□□□□ -0.63
LIMK2-202ENST00000333611 SDHAF3Q9NRP4 125 aa11.13□□□□□ -0.63
LIMK2-202ENST00000333611 DZANK1Q9NVP4 752 aa11.13□□□□□ -0.63
LIMK2-202ENST00000333611 ZNF282Q9UDV7 671 aaPredicted RBP11.13□□□□□ -0.63
LIMK2-202ENST00000333611 A0A1W2PRB8 838 aa11.13□□□□□ -0.63
LIMK2-202ENST00000333611 PRAMEF25A6NGN4 478 aa11.13□□□□□ -0.63
LIMK2-202ENST00000333611 DVL2O14641 736 aa11.13□□□□□ -0.63
LIMK2-202ENST00000333611 IL1RNP18510 177 aa11.13□□□□□ -0.63
LIMK2-202ENST00000333611 DGCR2P98153 550 aa11.13□□□□□ -0.63
LIMK2-202ENST00000333611 FABP9Q0Z7S8 132 aa11.13□□□□□ -0.63
LIMK2-202ENST00000333611 SP140Q13342 867 aa11.13□□□□□ -0.63
LIMK2-202ENST00000333611 CD276Q5ZPR3 534 aa11.13□□□□□ -0.63
LIMK2-202ENST00000333611 RGS7BPQ6MZT1 257 aaPredicted RBP11.13□□□□□ -0.63
LIMK2-202ENST00000333611 SLC27A4Q6P1M0 643 aa11.13□□□□□ -0.63
LIMK2-202ENST00000333611 ARL9Q6T311 187 aa11.13□□□□□ -0.63
LIMK2-202ENST00000333611 Q6ZTK2 550 aa11.13□□□□□ -0.63
LIMK2-202ENST00000333611 WDR53Q7Z5U6 358 aaPredicted RBP11.13□□□□□ -0.63
LIMK2-202ENST00000333611 SYT9Q86SS6 491 aa11.13□□□□□ -0.63
LIMK2-202ENST00000333611 TMEM17Q86X19 198 aa11.13□□□□□ -0.63
LIMK2-202ENST00000333611 UBTD2Q8WUN7 234 aa11.13□□□□□ -0.63
LIMK2-202ENST00000333611 AHCYL2Q96HN2 611 aaKnown RBP11.13□□□□□ -0.63
LIMK2-202ENST00000333611 FCRL4Q96PJ5 515 aa11.13□□□□□ -0.63
LIMK2-202ENST00000333611 PTDSS2Q9BVG9 487 aa11.13□□□□□ -0.63
LIMK2-202ENST00000333611 GABARAPL3Q9BY60 117 aa11.13□□□□□ -0.63
LIMK2-202ENST00000333611 SEMA3GQ9NS98 782 aa11.13□□□□□ -0.63
LIMK2-202ENST00000333611 RASD1Q9Y272 281 aa11.13□□□□□ -0.63
LIMK2-202ENST00000333611 A0A0C4DFX4 3053 aa11.13□□□□□ -0.63
LIMK2-202ENST00000333611 SRPRAP08240 638 aaKnown RBP11.12□□□□□ -0.63
LIMK2-202ENST00000333611 HMGA1P17096 107 aaKnown RBP11.12□□□□□ -0.63
LIMK2-202ENST00000333611 NFYBP25208 207 aa11.12□□□□□ -0.63
LIMK2-202ENST00000333611 CSF2RBP32927 897 aa11.12□□□□□ -0.63
LIMK2-202ENST00000333611 PCGF2P35227 344 aa11.12□□□□□ -0.63
LIMK2-202ENST00000333611 ASMTP46597 345 aa11.12□□□□□ -0.63
LIMK2-202ENST00000333611 DEFB115Q30KQ5 88 aa11.12□□□□□ -0.63
LIMK2-202ENST00000333611 SLC30A6Q6NXT4 461 aa11.12□□□□□ -0.63
LIMK2-202ENST00000333611 COMMD6Q7Z4G1 85 aa11.12□□□□□ -0.63
LIMK2-202ENST00000333611 ADCK2Q7Z695 626 aa11.12□□□□□ -0.63
LIMK2-202ENST00000333611 PXT1Q8NFP0 134 aa11.12□□□□□ -0.63
LIMK2-202ENST00000333611 STK35Q8TDR2 534 aa11.12□□□□□ -0.63
LIMK2-202ENST00000333611 GEMIN6Q8WXD5 167 aaKnown RBP11.12□□□□□ -0.63
LIMK2-202ENST00000333611 TCEAL4Q96EI5 215 aa11.12□□□□□ -0.63
LIMK2-202ENST00000333611 MRPS24Q96EL2 167 aaKnown RBP11.12□□□□□ -0.63
LIMK2-202ENST00000333611 IL17FQ96PD4 163 aa11.12□□□□□ -0.63
LIMK2-202ENST00000333611 KLF16Q9BXK1 252 aaPredicted RBP11.12□□□□□ -0.63
LIMK2-202ENST00000333611 FAM86C1Q9NVL1 165 aa11.12□□□□□ -0.63
LIMK2-202ENST00000333611 IL20Q9NYY1 176 aa11.12□□□□□ -0.63
LIMK2-202ENST00000333611 ANGPT4Q9Y264 503 aa11.12□□□□□ -0.63
LIMK2-202ENST00000333611 NLRC5Q86WI3 1866 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms