RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 CDHR4A6H8M9 788 aa16.16■□□□□ 0.18
DDX28-201ENST00000332395 KDM4EB2RXH2 506 aaPredicted RBP16.16■□□□□ 0.18
DDX28-201ENST00000332395 TAF4O00268 1085 aa16.16■□□□□ 0.18
DDX28-201ENST00000332395 CHST10O43529 356 aa16.16■□□□□ 0.18
DDX28-201ENST00000332395 APOL3O95236 402 aa16.16■□□□□ 0.18
DDX28-201ENST00000332395 CH25HO95992 272 aa16.16■□□□□ 0.18
DDX28-201ENST00000332395 AK1P00568 194 aa16.16■□□□□ 0.18
DDX28-201ENST00000332395 SLC35E2P0CK97 266 aa16.16■□□□□ 0.18
DDX28-201ENST00000332395 MYL12AP19105 171 aa16.16■□□□□ 0.18
DDX28-201ENST00000332395 HTR2AP28223 471 aa16.16■□□□□ 0.18
DDX28-201ENST00000332395 S100A5P33763 92 aa16.16■□□□□ 0.18
DDX28-201ENST00000332395 GABRA3P34903 492 aa16.16■□□□□ 0.18
DDX28-201ENST00000332395 MTNR1AP48039 350 aa16.16■□□□□ 0.18
DDX28-201ENST00000332395 RNF144AP50876 292 aaPredicted RBP16.16■□□□□ 0.18
DDX28-201ENST00000332395 POU6F2P78424 691 aaPredicted RBP16.16■□□□□ 0.18
DDX28-201ENST00000332395 TUBA3EQ6PEY2 450 aa16.16■□□□□ 0.18
DDX28-201ENST00000332395 DGAT2L6Q6ZPD8 337 aa16.16■□□□□ 0.18
DDX28-201ENST00000332395 PRSS27Q9BQR3 290 aa16.16■□□□□ 0.18
DDX28-201ENST00000332395 SEC14L4Q9UDX3 406 aa16.16■□□□□ 0.18
DDX28-201ENST00000332395 KNL1Q8NG31 2342 aa16.16■□□□□ 0.18
DDX28-201ENST00000332395 GXYLT2A0PJZ3 443 aa16.16■□□□□ 0.18
DDX28-201ENST00000332395 IRGMA1A4Y4 181 aa16.16■□□□□ 0.18
DDX28-201ENST00000332395 SLC9B1P1A6NJY1 282 aa16.16■□□□□ 0.18
DDX28-201ENST00000332395 CDC42EP2O14613 210 aa16.16■□□□□ 0.18
DDX28-201ENST00000332395 SURF4O15260 269 aa16.16■□□□□ 0.18
DDX28-201ENST00000332395 OR10H2O60403 315 aa16.16■□□□□ 0.18
DDX28-201ENST00000332395 CBX7O95931 251 aa16.16■□□□□ 0.18
DDX28-201ENST00000332395 SRFP11831 508 aa16.16■□□□□ 0.18
DDX28-201ENST00000332395 CRYBB2P43320 205 aa16.16■□□□□ 0.18
DDX28-201ENST00000332395 ZNF155Q12901 538 aaPredicted RBP16.16■□□□□ 0.18
DDX28-201ENST00000332395 LIPKQ5VXJ0 399 aa16.16■□□□□ 0.18
DDX28-201ENST00000332395 GDPGP1Q6ZNW5 385 aa16.16■□□□□ 0.18
DDX28-201ENST00000332395 MCATQ8IVS2 390 aaKnown RBP16.16■□□□□ 0.18
DDX28-201ENST00000332395 VWA5B2Q8N398 1253 aa16.16■□□□□ 0.18
DDX28-201ENST00000332395 CNPPD1Q9BV87 410 aa16.16■□□□□ 0.18
DDX28-201ENST00000332395 TEX12Q9BXU0 123 aa16.16■□□□□ 0.18
DDX28-201ENST00000332395 RBCK1Q9BYM8 510 aa16.16■□□□□ 0.18
DDX28-201ENST00000332395 SP140LQ9H930 580 aa16.16■□□□□ 0.18
DDX28-201ENST00000332395 CPNE5Q9HCH3 593 aa16.16■□□□□ 0.18
DDX28-201ENST00000332395 FGF20Q9NP95 211 aaPredicted RBP16.16■□□□□ 0.18
DDX28-201ENST00000332395 KRCC1Q9NPI7 259 aaPredicted RBP16.16■□□□□ 0.18
DDX28-201ENST00000332395 STUB1Q9UNE7 303 aa16.16■□□□□ 0.18
DDX28-201ENST00000332395 IGHV1OR15-9A0A0B4J2B8 117 aa16.15■□□□□ 0.18
DDX28-201ENST00000332395 WWP2O00308 870 aa16.15■□□□□ 0.18
DDX28-201ENST00000332395 MBTPS2O43462 519 aa16.15■□□□□ 0.18
DDX28-201ENST00000332395 BRINP1O60477 761 aa16.15■□□□□ 0.18
DDX28-201ENST00000332395 OR1Q1Q15612 314 aa16.15■□□□□ 0.18
DDX28-201ENST00000332395 NDUFA5Q16718 116 aa16.15■□□□□ 0.18
DDX28-201ENST00000332395 LSRQ86X29 649 aaPredicted RBP16.15■□□□□ 0.18
DDX28-201ENST00000332395 PHC2Q8IXK0 858 aa16.15■□□□□ 0.18
DDX28-201ENST00000332395 OR52R1Q8NGF1 315 aa16.15■□□□□ 0.18
DDX28-201ENST00000332395 OR9Q1Q8NGQ5 310 aa16.15■□□□□ 0.18
DDX28-201ENST00000332395 POLE4Q9NR33 117 aa16.15■□□□□ 0.18
DDX28-201ENST00000332395 SLC2A4RGQ9NR83 387 aa16.15■□□□□ 0.18
DDX28-201ENST00000332395 CDH10Q9Y6N8 788 aa16.15■□□□□ 0.18
DDX28-201ENST00000332395 A0A0A6YYC8 382 aaPredicted RBP16.14■□□□□ 0.17
DDX28-201ENST00000332395 CHURC1-FNTBB4DL54 471 aa16.14■□□□□ 0.17
DDX28-201ENST00000332395 I3L1I5 382 aaPredicted RBP16.14■□□□□ 0.17
DDX28-201ENST00000332395 NKX2-2O95096 273 aa16.14■□□□□ 0.17
DDX28-201ENST00000332395 PRTGQ2VWP7 1150 aa16.14■□□□□ 0.17
DDX28-201ENST00000332395 PGGHGQ32M88 737 aa16.14■□□□□ 0.17
DDX28-201ENST00000332395 WDR88Q6ZMY6 472 aa16.14■□□□□ 0.17
DDX28-201ENST00000332395 FAM174AQ8TBP5 190 aa16.14■□□□□ 0.17
DDX28-201ENST00000332395 C17orf50Q8WW18 174 aa16.14■□□□□ 0.17
DDX28-201ENST00000332395 ASPNQ9BXN1 380 aa16.14■□□□□ 0.17
DDX28-201ENST00000332395 TPK1Q9H3S4 243 aa16.14■□□□□ 0.17
DDX28-201ENST00000332395 SIAEQ9HAT2 523 aa16.14■□□□□ 0.17
DDX28-201ENST00000332395 CAPN10Q9HC96 672 aa16.14■□□□□ 0.17
DDX28-201ENST00000332395 IL20RAQ9UHF4 553 aa16.14■□□□□ 0.17
DDX28-201ENST00000332395 ZNF229Q9UJW7 825 aa16.14■□□□□ 0.17
DDX28-201ENST00000332395 PEX16Q9Y5Y5 336 aa16.14■□□□□ 0.17
DDX28-201ENST00000332395 FAM47E-STBD1D6RA91 191 aa16.14■□□□□ 0.17
DDX28-201ENST00000332395 ZNF217O75362 1048 aa16.14■□□□□ 0.17
DDX28-201ENST00000332395 RCVRNP35243 200 aa16.14■□□□□ 0.17
DDX28-201ENST00000332395 CDH11P55287 796 aa16.14■□□□□ 0.17
DDX28-201ENST00000332395 WNT4P56705 351 aa16.14■□□□□ 0.17
DDX28-201ENST00000332395 PRKCDQ05655 676 aa16.14■□□□□ 0.17
DDX28-201ENST00000332395 GAS6Q14393 721 aa16.14■□□□□ 0.17
DDX28-201ENST00000332395 SF3B4Q15427 424 aaKnown RBP eCLIP16.14■□□□□ 0.17
DDX28-201ENST00000332395 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.14■□□□□ 0.17
DDX28-201ENST00000332395 THOC7Q6I9Y2 204 aaKnown RBP16.14■□□□□ 0.17
DDX28-201ENST00000332395 ZAR1Q86SH2 424 aa16.14■□□□□ 0.17
DDX28-201ENST00000332395 DEFB119Q8N690 84 aa16.14■□□□□ 0.17
DDX28-201ENST00000332395 CLDN22Q8N7P3 220 aa16.14■□□□□ 0.17
DDX28-201ENST00000332395 OR2T33Q8NG76 320 aa16.14■□□□□ 0.17
DDX28-201ENST00000332395 HOXB13Q92826 284 aaPredicted RBP16.14■□□□□ 0.17
DDX28-201ENST00000332395 PMM1Q92871 262 aa16.14■□□□□ 0.17
DDX28-201ENST00000332395 TRMT61AQ96FX7 289 aaKnown RBP16.14■□□□□ 0.17
DDX28-201ENST00000332395 TXNDC15Q96J42 360 aa16.14■□□□□ 0.17
DDX28-201ENST00000332395 LMAN1LQ9HAT1 526 aa16.14■□□□□ 0.17
DDX28-201ENST00000332395 MED17Q9NVC6 651 aa16.14■□□□□ 0.17
DDX28-201ENST00000332395 HCN3Q9P1Z3 774 aa16.14■□□□□ 0.17
DDX28-201ENST00000332395 TMEM129A0AVI4 362 aa16.13■□□□□ 0.17
DDX28-201ENST00000332395 HYKKA2RU49 373 aa16.13■□□□□ 0.17
DDX28-201ENST00000332395 UPK1BO75841 260 aa16.13■□□□□ 0.17
DDX28-201ENST00000332395 MED26O95402 600 aa16.13■□□□□ 0.17
DDX28-201ENST00000332395 BMP8BP34820 402 aa16.13■□□□□ 0.17
DDX28-201ENST00000332395 GCGRP47871 477 aa16.13■□□□□ 0.17
DDX28-201ENST00000332395 ZNF45Q02386 682 aa16.13■□□□□ 0.17
DDX28-201ENST00000332395 SLC13A2Q13183 592 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms