RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 AAGABQ6PD74 315 aa12.74□□□□□ -0.37
LIMS1-201ENST00000332345 ENPP6Q6UWR7 440 aa12.74□□□□□ -0.37
LIMS1-201ENST00000332345 MTERF4Q7Z6M4 381 aaKnown RBP12.74□□□□□ -0.37
LIMS1-201ENST00000332345 ZAR1Q86SH2 424 aa12.74□□□□□ -0.37
LIMS1-201ENST00000332345 MRGPRGQ86SM5 289 aa12.74□□□□□ -0.37
LIMS1-201ENST00000332345 IFNEQ86WN2 208 aa12.74□□□□□ -0.37
LIMS1-201ENST00000332345 ZNF808Q8N4W9 903 aaPredicted RBP12.74□□□□□ -0.37
LIMS1-201ENST00000332345 CHDHQ8NE62 594 aaPredicted RBP12.74□□□□□ -0.37
LIMS1-201ENST00000332345 OR2M3Q8NG83 312 aa12.74□□□□□ -0.37
LIMS1-201ENST00000332345 OR9I1Q8NGQ6 314 aa12.74□□□□□ -0.37
LIMS1-201ENST00000332345 VPS33AQ96AX1 596 aa12.74□□□□□ -0.37
LIMS1-201ENST00000332345 DMRTA2Q96SC8 542 aa12.74□□□□□ -0.37
LIMS1-201ENST00000332345 RTN4RQ9BZR6 473 aa12.74□□□□□ -0.37
LIMS1-201ENST00000332345 COQ3Q9NZJ6 369 aa12.74□□□□□ -0.37
LIMS1-201ENST00000332345 CCDC167Q9P0B6 97 aa12.74□□□□□ -0.37
LIMS1-201ENST00000332345 TNFRSF10DQ9UBN6 386 aa12.74□□□□□ -0.37
LIMS1-201ENST00000332345 SLC6A5Q9Y345 797 aa12.74□□□□□ -0.37
LIMS1-201ENST00000332345 USP9YO00507 2555 aaPredicted RBP12.73□□□□□ -0.37
LIMS1-201ENST00000332345 IGLV3-32A0A0A0MS00 114 aa12.73□□□□□ -0.37
LIMS1-201ENST00000332345 A0A0G2JND7 137 aa12.73□□□□□ -0.37
LIMS1-201ENST00000332345 GSNP06396 782 aa12.73□□□□□ -0.37
LIMS1-201ENST00000332345 GUSBP08236 651 aa12.73□□□□□ -0.37
LIMS1-201ENST00000332345 RNF224P0DH78 156 aa12.73□□□□□ -0.37
LIMS1-201ENST00000332345 CHMP24386 653 aa12.73□□□□□ -0.37
LIMS1-201ENST00000332345 CDKN2CP42773 168 aa12.73□□□□□ -0.37
LIMS1-201ENST00000332345 KHKP50053 298 aa12.73□□□□□ -0.37
LIMS1-201ENST00000332345 CASP9P55211 416 aa12.73□□□□□ -0.37
LIMS1-201ENST00000332345 GUCY1A3Q02108 690 aa12.73□□□□□ -0.37
LIMS1-201ENST00000332345 CRYZQ08257 329 aaKnown RBP12.73□□□□□ -0.37
LIMS1-201ENST00000332345 PMPCAQ10713 525 aa12.73□□□□□ -0.37
LIMS1-201ENST00000332345 SQLEQ14534 574 aa12.73□□□□□ -0.37
LIMS1-201ENST00000332345 GLYR1Q49A26 553 aaPredicted RBP12.73□□□□□ -0.37
LIMS1-201ENST00000332345 TIGD2Q4W5G0 525 aa12.73□□□□□ -0.37
LIMS1-201ENST00000332345 AGKQ53H12 422 aa12.73□□□□□ -0.37
LIMS1-201ENST00000332345 KLHL26Q53HC5 615 aa12.73□□□□□ -0.37
LIMS1-201ENST00000332345 C6orf10Q5SRN2 563 aa12.73□□□□□ -0.37
LIMS1-201ENST00000332345 HEPHL1Q6MZM0 1159 aa12.73□□□□□ -0.37
LIMS1-201ENST00000332345 TNFAIP8L2Q6P589 184 aaPredicted RBP12.73□□□□□ -0.37
LIMS1-201ENST00000332345 BLOC1S3Q6QNY0 202 aa12.73□□□□□ -0.37
LIMS1-201ENST00000332345 B3GNT6Q6ZMB0 384 aa12.73□□□□□ -0.37
LIMS1-201ENST00000332345 RNF130Q86XS8 419 aa12.73□□□□□ -0.37
LIMS1-201ENST00000332345 RFWD2Q8NHY2 731 aa12.73□□□□□ -0.37
LIMS1-201ENST00000332345 ITLN2Q8WWU7 325 aaPredicted RBP12.73□□□□□ -0.37
LIMS1-201ENST00000332345 RND1Q92730 232 aa12.73□□□□□ -0.37
LIMS1-201ENST00000332345 UGT2B28Q9BY64 529 aa12.73□□□□□ -0.37
LIMS1-201ENST00000332345 SERHL2Q9H4I8 314 aa12.73□□□□□ -0.37
LIMS1-201ENST00000332345 CCDC134Q9H6E4 229 aa12.73□□□□□ -0.37
LIMS1-201ENST00000332345 POLE3Q9NRF9 147 aa12.73□□□□□ -0.37
LIMS1-201ENST00000332345 LIPT1Q9Y234 373 aa12.73□□□□□ -0.37
LIMS1-201ENST00000332345 FAM47E-STBD1D6RA91 191 aa12.72□□□□□ -0.37
LIMS1-201ENST00000332345 LINC01387J3KSC0 135 aa12.72□□□□□ -0.37
LIMS1-201ENST00000332345 GTPBP1O00178 669 aaKnown RBP12.72□□□□□ -0.37
LIMS1-201ENST00000332345 HK1P19367 917 aa12.72□□□□□ -0.37
LIMS1-201ENST00000332345 DCTP40126 519 aa12.72□□□□□ -0.37
LIMS1-201ENST00000332345 MDH1P40925 334 aaKnown RBP12.72□□□□□ -0.37
LIMS1-201ENST00000332345 ADORA2A-AS1P86434 159 aa12.72□□□□□ -0.37
LIMS1-201ENST00000332345 RCAN2Q14206 197 aa12.72□□□□□ -0.37
LIMS1-201ENST00000332345 GPR68Q15743 365 aa12.72□□□□□ -0.37
LIMS1-201ENST00000332345 C1orf185Q5T7R7 199 aa12.72□□□□□ -0.37
LIMS1-201ENST00000332345 AP1ARQ63HQ0 302 aa12.72□□□□□ -0.37
LIMS1-201ENST00000332345 MAMDC2Q7Z304 686 aaPredicted RBP12.72□□□□□ -0.37
LIMS1-201ENST00000332345 FUNDC1Q8IVP5 155 aa12.72□□□□□ -0.37
LIMS1-201ENST00000332345 ULK2Q8IYT8 1036 aa12.72□□□□□ -0.37
LIMS1-201ENST00000332345 PHOSPHO1Q8TCT1 267 aa12.72□□□□□ -0.37
LIMS1-201ENST00000332345 ZFP90Q8TF47 636 aa12.72□□□□□ -0.37
LIMS1-201ENST00000332345 GTF2H4Q92759 462 aa12.72□□□□□ -0.37
LIMS1-201ENST00000332345 RAB8BQ92930 207 aa12.72□□□□□ -0.37
LIMS1-201ENST00000332345 SPDL1Q96EA4 605 aa12.72□□□□□ -0.37
LIMS1-201ENST00000332345 C1GALT1C1Q96EU7 318 aa12.72□□□□□ -0.37
LIMS1-201ENST00000332345 SFXN2Q96NB2 322 aa12.72□□□□□ -0.37
LIMS1-201ENST00000332345 NMUR2Q9GZQ4 415 aa12.72□□□□□ -0.37
LIMS1-201ENST00000332345 PRDM14Q9GZV8 571 aa12.72□□□□□ -0.37
LIMS1-201ENST00000332345 MRGBPQ9NV56 204 aa12.72□□□□□ -0.37
LIMS1-201ENST00000332345 FGFR1OP2Q9NVK5 253 aa12.72□□□□□ -0.37
LIMS1-201ENST00000332345 STOML1Q9UBI4 398 aa12.72□□□□□ -0.37
LIMS1-201ENST00000332345 PLEKHB1Q9UF11 243 aaPredicted RBP12.72□□□□□ -0.37
LIMS1-201ENST00000332345 CAMK2AQ9UQM7 478 aa12.72□□□□□ -0.37
LIMS1-201ENST00000332345 RPH3AQ9Y2J0 694 aaPredicted RBP12.72□□□□□ -0.37
LIMS1-201ENST00000332345 DTNAQ9Y4J8 743 aa12.72□□□□□ -0.37
LIMS1-201ENST00000332345 DOPEY1Q5JWR5 2465 aa12.72□□□□□ -0.37
LIMS1-201ENST00000332345 MED12Q93074 2177 aa12.71□□□□□ -0.37
LIMS1-201ENST00000332345 SPTAN1Q13813 2472 aaKnown RBP12.71□□□□□ -0.37
LIMS1-201ENST00000332345 NCOA6Q14686 2063 aaPredicted RBP12.71□□□□□ -0.37
LIMS1-201ENST00000332345 A0A087WZY1 265 aa12.71□□□□□ -0.37
LIMS1-201ENST00000332345 A1L4Q6 167 aa12.71□□□□□ -0.37
LIMS1-201ENST00000332345 C17orf51A8MQB3 221 aa12.71□□□□□ -0.37
LIMS1-201ENST00000332345 HMGN4O00479 90 aa12.71□□□□□ -0.37
LIMS1-201ENST00000332345 FCMRO60667 390 aa12.71□□□□□ -0.37
LIMS1-201ENST00000332345 GP1BBP13224 206 aa12.71□□□□□ -0.37
LIMS1-201ENST00000332345 CPN1P15169 458 aa12.71□□□□□ -0.37
LIMS1-201ENST00000332345 GFRA1P56159 465 aa12.71□□□□□ -0.37
LIMS1-201ENST00000332345 HPCAP84074 193 aa12.71□□□□□ -0.37
LIMS1-201ENST00000332345 ART3Q13508 389 aa12.71□□□□□ -0.37
LIMS1-201ENST00000332345 BCL2A1Q16548 175 aa12.71□□□□□ -0.37
LIMS1-201ENST00000332345 ZNF630Q2M218 657 aaPredicted RBP12.71□□□□□ -0.37
LIMS1-201ENST00000332345 GPAT3Q53EU6 434 aa12.71□□□□□ -0.37
LIMS1-201ENST00000332345 GATSQ8NAP1 163 aa12.71□□□□□ -0.37
LIMS1-201ENST00000332345 OR10Q1Q8NGQ4 319 aa12.71□□□□□ -0.37
LIMS1-201ENST00000332345 B4GALNT2Q8NHY0 566 aa12.71□□□□□ -0.37
LIMS1-201ENST00000332345 OIT3Q8WWZ8 545 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms