RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 BBS1Q8NFJ9 593 aa13.54□□□□□ -0.24
TPM3-206ENST00000330188 OR4F15Q8NGB8 312 aa13.54□□□□□ -0.24
TPM3-206ENST00000330188 SLC37A2Q8TED4 501 aa13.54□□□□□ -0.24
TPM3-206ENST00000330188 UFD1Q92890 307 aa13.54□□□□□ -0.24
TPM3-206ENST00000330188 SAMD8Q96LT4 415 aa13.54□□□□□ -0.24
TPM3-206ENST00000330188 STACQ99469 402 aa13.54□□□□□ -0.24
TPM3-206ENST00000330188 TPK1Q9H3S4 243 aa13.54□□□□□ -0.24
TPM3-206ENST00000330188 C8orf33Q9H7E9 229 aaPredicted RBP13.54□□□□□ -0.24
TPM3-206ENST00000330188 SACM1LQ9NTJ5 587 aa13.54□□□□□ -0.24
TPM3-206ENST00000330188 C14orf119Q9NWQ9 140 aa13.54□□□□□ -0.24
TPM3-206ENST00000330188 CD207Q9UJ71 328 aa13.54□□□□□ -0.24
TPM3-206ENST00000330188 ZNF223Q9UK11 482 aaPredicted RBP13.54□□□□□ -0.24
TPM3-206ENST00000330188 CSNK1G3Q9Y6M4 447 aa13.54□□□□□ -0.24
TPM3-206ENST00000330188 SLC35F4A4IF30 521 aa13.54□□□□□ -0.24
TPM3-206ENST00000330188 LYPD3O95274 346 aa13.54□□□□□ -0.24
TPM3-206ENST00000330188 IGHV4-34P06331 123 aa13.54□□□□□ -0.24
TPM3-206ENST00000330188 MAP3K8P41279 467 aa13.54□□□□□ -0.24
TPM3-206ENST00000330188 PPP1CAP62136 330 aa13.54□□□□□ -0.24
TPM3-206ENST00000330188 RUNX1T1Q06455 604 aa13.54□□□□□ -0.24
TPM3-206ENST00000330188 KRR1Q13601 381 aaKnown RBP13.54□□□□□ -0.24
TPM3-206ENST00000330188 EXOSC7Q15024 291 aaKnown RBP13.54□□□□□ -0.24
TPM3-206ENST00000330188 OR1Q1Q15612 314 aa13.54□□□□□ -0.24
TPM3-206ENST00000330188 MANEAQ5SRI9 462 aa13.54□□□□□ -0.24
TPM3-206ENST00000330188 ZCCHC12Q6PEW1 402 aa13.54□□□□□ -0.24
TPM3-206ENST00000330188 QSOX2Q6ZRP7 698 aa13.54□□□□□ -0.24
TPM3-206ENST00000330188 LHFPL3Q86UP9 236 aa13.54□□□□□ -0.24
TPM3-206ENST00000330188 CSNK1A1LQ8N752 337 aa13.54□□□□□ -0.24
TPM3-206ENST00000330188 FRMD1Q8N878 549 aa13.54□□□□□ -0.24
TPM3-206ENST00000330188 OR2T33Q8NG76 320 aa13.54□□□□□ -0.24
TPM3-206ENST00000330188 HMGB4Q8WW32 186 aa13.54□□□□□ -0.24
TPM3-206ENST00000330188 ZNF649Q9BS31 505 aa13.54□□□□□ -0.24
TPM3-206ENST00000330188 KRCC1Q9NPI7 259 aaPredicted RBP13.54□□□□□ -0.24
TPM3-206ENST00000330188 TRPV5Q9NQA5 729 aa13.54□□□□□ -0.24
TPM3-206ENST00000330188 TOR4AQ9NXH8 423 aa13.54□□□□□ -0.24
TPM3-206ENST00000330188 CBLCQ9ULV8 474 aa13.54□□□□□ -0.24
TPM3-206ENST00000330188 MMP17Q9ULZ9 603 aa13.54□□□□□ -0.24
TPM3-206ENST00000330188 EXOGQ9Y2C4 368 aaKnown RBP13.54□□□□□ -0.24
TPM3-206ENST00000330188 LALBAP00709 142 aa13.53□□□□□ -0.24
TPM3-206ENST00000330188 HMGN1P05114 100 aa13.53□□□□□ -0.24
TPM3-206ENST00000330188 ZGLP1P0C6A0 271 aa13.53□□□□□ -0.24
TPM3-206ENST00000330188 HTR1FP30939 366 aa13.53□□□□□ -0.24
TPM3-206ENST00000330188 LTBRP36941 435 aa13.53□□□□□ -0.24
TPM3-206ENST00000330188 GCGRP47871 477 aa13.53□□□□□ -0.24
TPM3-206ENST00000330188 RNF144AP50876 292 aaPredicted RBP13.53□□□□□ -0.24
TPM3-206ENST00000330188 VSX2P58304 361 aaPredicted RBP13.53□□□□□ -0.24
TPM3-206ENST00000330188 DEFA1P59665 94 aa13.53□□□□□ -0.24
TPM3-206ENST00000330188 DEFA3P59666 94 aa13.53□□□□□ -0.24
TPM3-206ENST00000330188 EIF2B5Q13144 721 aaKnown RBP13.53□□□□□ -0.24
TPM3-206ENST00000330188 HNRNPA0Q13151 305 aaKnown RBP13.53□□□□□ -0.24
TPM3-206ENST00000330188 ZNF542PQ5EBM4 170 aa13.53□□□□□ -0.24
TPM3-206ENST00000330188 NXNL2Q5VZ03 156 aa13.53□□□□□ -0.24
TPM3-206ENST00000330188 FIGNL1Q6PIW4 674 aa13.53□□□□□ -0.24
TPM3-206ENST00000330188 TMPRSS11AQ6ZMR5 421 aa13.53□□□□□ -0.24
TPM3-206ENST00000330188 PFN4Q8NHR9 129 aa13.53□□□□□ -0.24
TPM3-206ENST00000330188 C1GALT1C1Q96EU7 318 aa13.53□□□□□ -0.24
TPM3-206ENST00000330188 KCTD7Q96MP8 289 aa13.53□□□□□ -0.24
TPM3-206ENST00000330188 GSDMCQ9BYG8 508 aa13.53□□□□□ -0.24
TPM3-206ENST00000330188 DPH1Q9BZG8 443 aa13.53□□□□□ -0.24
TPM3-206ENST00000330188 UBQLN3Q9H347 655 aa13.53□□□□□ -0.24
TPM3-206ENST00000330188 RERGLQ9H628 205 aa13.53□□□□□ -0.24
TPM3-206ENST00000330188 HINT3Q9NQE9 182 aaKnown RBP13.53□□□□□ -0.24
TPM3-206ENST00000330188 STARD5Q9NSY2 213 aa13.53□□□□□ -0.24
TPM3-206ENST00000330188 PLEKHB1Q9UF11 243 aaPredicted RBP13.53□□□□□ -0.24
TPM3-206ENST00000330188 CMAHPQ9Y471 501 aa13.53□□□□□ -0.24
TPM3-206ENST00000330188 CDHR4A6H8M9 788 aa13.52□□□□□ -0.24
TPM3-206ENST00000330188 PRAMEF26H0Y7S4 382 aa13.52□□□□□ -0.24
TPM3-206ENST00000330188 SOCS6O14544 535 aa13.52□□□□□ -0.24
TPM3-206ENST00000330188 SLC30A4O14863 429 aa13.52□□□□□ -0.24
TPM3-206ENST00000330188 HCRTR1O43613 425 aa13.52□□□□□ -0.24
TPM3-206ENST00000330188 IGHA1P01876 353 aa13.52□□□□□ -0.24
TPM3-206ENST00000330188 GABRA5P31644 462 aa13.52□□□□□ -0.24
TPM3-206ENST00000330188 SDC2P34741 201 aa13.52□□□□□ -0.24
TPM3-206ENST00000330188 FXYD6P3P58550 94 aa13.52□□□□□ -0.24
TPM3-206ENST00000330188 FABP5Q01469 135 aa13.52□□□□□ -0.24
TPM3-206ENST00000330188 ZNF155Q12901 538 aaPredicted RBP13.52□□□□□ -0.24
TPM3-206ENST00000330188 DSG2Q14126 1118 aa13.52□□□□□ -0.24
TPM3-206ENST00000330188 ZNF79Q15937 498 aa13.52□□□□□ -0.24
TPM3-206ENST00000330188 CRTC2Q53ET0 693 aaPredicted RBP13.52□□□□□ -0.24
TPM3-206ENST00000330188 ZMAT1Q5H9K5 638 aa13.52□□□□□ -0.24
TPM3-206ENST00000330188 CCBE1Q6UXH8 406 aaPredicted RBP13.52□□□□□ -0.24
TPM3-206ENST00000330188 HSDL2Q6YN16 418 aa13.52□□□□□ -0.24
TPM3-206ENST00000330188 ZNF761Q86XN6 746 aaPredicted RBP13.52□□□□□ -0.24
TPM3-206ENST00000330188 ZFP41Q8N8Y5 198 aa13.52□□□□□ -0.24
TPM3-206ENST00000330188 GALNT6Q8NCL4 622 aa13.52□□□□□ -0.24
TPM3-206ENST00000330188 BRIX1Q8TDN6 353 aaKnown RBP13.52□□□□□ -0.24
TPM3-206ENST00000330188 ANKRD9Q96BM1 317 aaPredicted RBP13.52□□□□□ -0.24
TPM3-206ENST00000330188 CTHRC1Q96CG8 243 aa13.52□□□□□ -0.24
TPM3-206ENST00000330188 MSLNLQ96KJ4 702 aa13.52□□□□□ -0.24
TPM3-206ENST00000330188 TM9SF2Q99805 663 aa13.52□□□□□ -0.24
TPM3-206ENST00000330188 MED18Q9BUE0 208 aa13.52□□□□□ -0.24
TPM3-206ENST00000330188 OR52D1Q9H346 318 aa13.52□□□□□ -0.24
TPM3-206ENST00000330188 INIPQ9NRY2 104 aa13.52□□□□□ -0.24
TPM3-206ENST00000330188 USP36Q9P275 1121 aaKnown RBP13.52□□□□□ -0.24
TPM3-206ENST00000330188 KIR2DS5A0A0G2JLQ3 304 aa13.52□□□□□ -0.25
TPM3-206ENST00000330188 A0A0G2JNG1 304 aa13.52□□□□□ -0.25
TPM3-206ENST00000330188 GXYLT2A0PJZ3 443 aa13.52□□□□□ -0.25
TPM3-206ENST00000330188 UNC119BA6NIH7 251 aa13.52□□□□□ -0.25
TPM3-206ENST00000330188 H3BQ06 376 aaPredicted RBP13.52□□□□□ -0.25
TPM3-206ENST00000330188 KIR2DS3K7RE56 304 aa13.52□□□□□ -0.25
TPM3-206ENST00000330188 IFI6P09912 130 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms