RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 GTPBP3Q969Y2 492 aaKnown RBP11.11□□□□□ -0.63
SHMT2-201ENST00000328923 C14orf79Q96F83 325 aa11.11□□□□□ -0.63
SHMT2-201ENST00000328923 OR52E6Q96RD3 313 aa11.11□□□□□ -0.63
SHMT2-201ENST00000328923 INPP5KQ9BT40 448 aa11.11□□□□□ -0.63
SHMT2-201ENST00000328923 PBX4Q9BYU1 374 aa11.11□□□□□ -0.63
SHMT2-201ENST00000328923 SLC38A1Q9H2H9 487 aa11.11□□□□□ -0.63
SHMT2-201ENST00000328923 PIGMQ9H3S5 423 aa11.11□□□□□ -0.63
SHMT2-201ENST00000328923 KLHL31Q9H511 634 aa11.11□□□□□ -0.63
SHMT2-201ENST00000328923 LHX9Q9NQ69 397 aa11.11□□□□□ -0.63
SHMT2-201ENST00000328923 UXTQ9UBK9 157 aaPredicted RBP11.11□□□□□ -0.63
SHMT2-201ENST00000328923 ZNF629Q9UEG4 869 aaPredicted RBP11.11□□□□□ -0.63
SHMT2-201ENST00000328923 GSTK1Q9Y2Q3 226 aa11.11□□□□□ -0.63
SHMT2-201ENST00000328923 HOXA2O43364 376 aa11.11□□□□□ -0.63
SHMT2-201ENST00000328923 OR10H2O60403 315 aa11.11□□□□□ -0.63
SHMT2-201ENST00000328923 SOD1P00441 154 aa11.11□□□□□ -0.63
SHMT2-201ENST00000328923 OTCP00480 354 aa11.11□□□□□ -0.63
SHMT2-201ENST00000328923 RAB4AP20338 218 aa11.11□□□□□ -0.63
SHMT2-201ENST00000328923 AGAP20933 346 aa11.11□□□□□ -0.63
SHMT2-201ENST00000328923 NOS3P29474 1203 aa11.11□□□□□ -0.63
SHMT2-201ENST00000328923 CRABP1P29762 137 aa11.11□□□□□ -0.63
SHMT2-201ENST00000328923 SDHAP31040 664 aa11.11□□□□□ -0.63
SHMT2-201ENST00000328923 LHX1P48742 406 aa11.11□□□□□ -0.63
SHMT2-201ENST00000328923 MVDP53602 400 aa11.11□□□□□ -0.63
SHMT2-201ENST00000328923 PSMA6P60900 246 aaKnown RBP11.11□□□□□ -0.63
SHMT2-201ENST00000328923 RAP2BP61225 183 aa11.11□□□□□ -0.63
SHMT2-201ENST00000328923 RPL38P63173 70 aaKnown RBP11.11□□□□□ -0.63
SHMT2-201ENST00000328923 SRSF3P84103 164 aaKnown RBP11.11□□□□□ -0.63
SHMT2-201ENST00000328923 MAT1AQ00266 395 aaKnown RBP11.11□□□□□ -0.63
SHMT2-201ENST00000328923 UQCC3Q6UW78 93 aa11.11□□□□□ -0.63
SHMT2-201ENST00000328923 MOB3CQ70IA8 216 aa11.11□□□□□ -0.63
SHMT2-201ENST00000328923 WDR53Q7Z5U6 358 aaPredicted RBP11.11□□□□□ -0.63
SHMT2-201ENST00000328923 TMEM86AQ8N2M4 240 aa11.11□□□□□ -0.63
SHMT2-201ENST00000328923 OR2L5Q8NG80 312 aa11.11□□□□□ -0.63
SHMT2-201ENST00000328923 OR5T3Q8NGG3 340 aa11.11□□□□□ -0.63
SHMT2-201ENST00000328923 OR1S2Q8NGQ3 325 aa11.11□□□□□ -0.63
SHMT2-201ENST00000328923 GNPDA2Q8TDQ7 276 aa11.11□□□□□ -0.63
SHMT2-201ENST00000328923 ORAI1Q96D31 301 aa11.11□□□□□ -0.63
SHMT2-201ENST00000328923 PCED1BQ96HM7 432 aa11.11□□□□□ -0.63
SHMT2-201ENST00000328923 C7orf34Q96L11 122 aa11.11□□□□□ -0.63
SHMT2-201ENST00000328923 FCRL2Q96LA5 508 aaPredicted RBP11.11□□□□□ -0.63
SHMT2-201ENST00000328923 TGM7Q96PF1 710 aa11.11□□□□□ -0.63
SHMT2-201ENST00000328923 GPR61Q9BZJ8 451 aa11.11□□□□□ -0.63
SHMT2-201ENST00000328923 TMEM30AQ9NV96 361 aa11.11□□□□□ -0.63
SHMT2-201ENST00000328923 SF3B6Q9Y3B4 125 aaKnown RBP11.11□□□□□ -0.63
SHMT2-201ENST00000328923 RAI2Q9Y5P3 530 aa11.11□□□□□ -0.63
SHMT2-201ENST00000328923 MYADML2A6NDP7 307 aa11.1□□□□□ -0.63
SHMT2-201ENST00000328923 OR6C76A6NM76 312 aa11.1□□□□□ -0.63
SHMT2-201ENST00000328923 LDLRAD4O15165 306 aa11.1□□□□□ -0.63
SHMT2-201ENST00000328923 TOX3O15405 576 aaPredicted RBP11.1□□□□□ -0.63
SHMT2-201ENST00000328923 SNRPCP09234 159 aaKnown RBP11.1□□□□□ -0.63
SHMT2-201ENST00000328923 EBLN1P0CF75 366 aa11.1□□□□□ -0.63
SHMT2-201ENST00000328923 SHC1P29353 583 aa11.1□□□□□ -0.63
SHMT2-201ENST00000328923 FEN1P39748 380 aaKnown RBP11.1□□□□□ -0.63
SHMT2-201ENST00000328923 CRYBB1P53674 252 aaPredicted RBP11.1□□□□□ -0.63
SHMT2-201ENST00000328923 RAG2P55895 527 aa11.1□□□□□ -0.63
SHMT2-201ENST00000328923 HTRA4P83105 476 aaPredicted RBP11.1□□□□□ -0.63
SHMT2-201ENST00000328923 OC90Q02509 493 aaPredicted RBP11.1□□□□□ -0.63
SHMT2-201ENST00000328923 OR2G6Q5TZ20 316 aa11.1□□□□□ -0.63
SHMT2-201ENST00000328923 DOK6Q6PKX4 331 aa11.1□□□□□ -0.63
SHMT2-201ENST00000328923 CLEC9AQ6UXN8 241 aa11.1□□□□□ -0.63
SHMT2-201ENST00000328923 DNAJB7Q7Z6W7 309 aaPredicted RBP11.1□□□□□ -0.63
SHMT2-201ENST00000328923 SERPINA11Q86U17 422 aa11.1□□□□□ -0.63
SHMT2-201ENST00000328923 LHFPL3Q86UP9 236 aa11.1□□□□□ -0.63
SHMT2-201ENST00000328923 LGI4Q8N135 537 aa11.1□□□□□ -0.63
SHMT2-201ENST00000328923 ZNF561Q8N587 486 aa11.1□□□□□ -0.63
SHMT2-201ENST00000328923 DBF4BQ8NFT6 615 aa11.1□□□□□ -0.63
SHMT2-201ENST00000328923 ARRDC2Q8TBH0 407 aa11.1□□□□□ -0.63
SHMT2-201ENST00000328923 ZNF296Q8WUU4 475 aaPredicted RBP11.1□□□□□ -0.63
SHMT2-201ENST00000328923 SELENOMQ8WWX9 145 aa11.1□□□□□ -0.63
SHMT2-201ENST00000328923 VOPP1Q96AW1 172 aa11.1□□□□□ -0.63
SHMT2-201ENST00000328923 AMDHD1Q96NU7 426 aa11.1□□□□□ -0.63
SHMT2-201ENST00000328923 GPR21Q99679 349 aa11.1□□□□□ -0.63
SHMT2-201ENST00000328923 CFHR5Q9BXR6 569 aa11.1□□□□□ -0.63
SHMT2-201ENST00000328923 SARS2Q9NP81 518 aaKnown RBP11.1□□□□□ -0.63
SHMT2-201ENST00000328923 FAM50BQ9Y247 325 aa11.1□□□□□ -0.63
SHMT2-201ENST00000328923 CARHSP1Q9Y2V2 147 aaKnown RBP11.1□□□□□ -0.63
SHMT2-201ENST00000328923 ASB1Q9Y576 335 aa11.1□□□□□ -0.63
SHMT2-201ENST00000328923 PATJQ8NI35 1801 aa11.1□□□□□ -0.63
SHMT2-201ENST00000328923 TMEM238LA0A1B0GVL6 79 aa11.1□□□□□ -0.63
SHMT2-201ENST00000328923 DUSP11O75319 330 aaKnown RBP11.1□□□□□ -0.63
SHMT2-201ENST00000328923 RAB3DO95716 219 aa11.1□□□□□ -0.63
SHMT2-201ENST00000328923 WNT1P04628 370 aa11.1□□□□□ -0.63
SHMT2-201ENST00000328923 THP07101 528 aa11.1□□□□□ -0.63
SHMT2-201ENST00000328923 NME1P15531 152 aaKnown RBP11.1□□□□□ -0.63
SHMT2-201ENST00000328923 ABOP16442 354 aa11.1□□□□□ -0.63
SHMT2-201ENST00000328923 KDELR2P33947 212 aa11.1□□□□□ -0.63
SHMT2-201ENST00000328923 CRATP43155 626 aa11.1□□□□□ -0.63
SHMT2-201ENST00000328923 ITKQ08881 620 aa11.1□□□□□ -0.63
SHMT2-201ENST00000328923 BOP1Q14137 746 aaKnown RBP11.1□□□□□ -0.63
SHMT2-201ENST00000328923 IHHQ14623 411 aa11.1□□□□□ -0.63
SHMT2-201ENST00000328923 ABRAXAS2Q15018 415 aa11.1□□□□□ -0.63
SHMT2-201ENST00000328923 TGIF1Q15583 401 aa11.1□□□□□ -0.63
SHMT2-201ENST00000328923 LBHQ53QV2 105 aaPredicted RBP11.1□□□□□ -0.63
SHMT2-201ENST00000328923 UBXN11Q5T124 520 aa11.1□□□□□ -0.63
SHMT2-201ENST00000328923 ADGRF1Q5T601 910 aa11.1□□□□□ -0.63
SHMT2-201ENST00000328923 IDNKQ5T6J7 187 aa11.1□□□□□ -0.63
SHMT2-201ENST00000328923 MEDAGQ5VYS4 303 aa11.1□□□□□ -0.63
SHMT2-201ENST00000328923 CLEC2AQ6UVW9 174 aa11.1□□□□□ -0.63
SHMT2-201ENST00000328923 BAIAP2L2Q6UXY1 529 aa11.1□□□□□ -0.63
SHMT2-201ENST00000328923 NPSR1Q6W5P4 371 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms