RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 THBDP07204 575 aa12.77□□□□□ -0.37
RPP40-201ENST00000319533 ANXA4P09525 319 aaPredicted RBP12.77□□□□□ -0.37
RPP40-201ENST00000319533 UROSP10746 265 aa12.77□□□□□ -0.37
RPP40-201ENST00000319533 FCGR2AP12318 317 aa12.77□□□□□ -0.37
RPP40-201ENST00000319533 PPP3CBP16298 524 aa12.77□□□□□ -0.37
RPP40-201ENST00000319533 PTH2RP49190 550 aa12.77□□□□□ -0.37
RPP40-201ENST00000319533 FOXA1P55317 472 aa12.77□□□□□ -0.37
RPP40-201ENST00000319533 RPS3AP61247 264 aaKnown RBP12.77□□□□□ -0.37
RPP40-201ENST00000319533 BTKQ06187 659 aa12.77□□□□□ -0.37
RPP40-201ENST00000319533 ZNF155Q12901 538 aaPredicted RBP12.77□□□□□ -0.37
RPP40-201ENST00000319533 DECR1Q16698 335 aa12.77□□□□□ -0.37
RPP40-201ENST00000319533 FAM71E1Q6IPT2 247 aa12.77□□□□□ -0.37
RPP40-201ENST00000319533 GGNQ86UU5 652 aa12.77□□□□□ -0.37
RPP40-201ENST00000319533 HOMEZQ8IX15 550 aa12.77□□□□□ -0.37
RPP40-201ENST00000319533 TCP10LQ8TDR4 215 aa12.77□□□□□ -0.37
RPP40-201ENST00000319533 ZDHHC16Q969W1 377 aa12.77□□□□□ -0.37
RPP40-201ENST00000319533 PERPQ96FX8 193 aa12.77□□□□□ -0.37
RPP40-201ENST00000319533 MDFIQ99750 246 aa12.77□□□□□ -0.37
RPP40-201ENST00000319533 LMF2Q9BU23 707 aaKnown RBP12.77□□□□□ -0.37
RPP40-201ENST00000319533 ZNF701Q9NV72 531 aaPredicted RBP12.77□□□□□ -0.37
RPP40-201ENST00000319533 WBP11Q9Y2W2 641 aaKnown RBP12.77□□□□□ -0.37
RPP40-201ENST00000319533 HEATR5AQ86XA9 2040 aa12.76□□□□□ -0.37
RPP40-201ENST00000319533 TTC36A6NLP5 189 aa12.76□□□□□ -0.37
RPP40-201ENST00000319533 KIAA1324LA8MWY0 1029 aaPredicted RBP12.76□□□□□ -0.37
RPP40-201ENST00000319533 H3BML4 177 aa12.76□□□□□ -0.37
RPP40-201ENST00000319533 AZIN1O14977 448 aa12.76□□□□□ -0.37
RPP40-201ENST00000319533 SEC14L5O43304 696 aa12.76□□□□□ -0.37
RPP40-201ENST00000319533 AQP8O94778 261 aa12.76□□□□□ -0.37
RPP40-201ENST00000319533 CHEK2O96017 543 aa12.76□□□□□ -0.37
RPP40-201ENST00000319533 JUNP05412 331 aaKnown RBP12.76□□□□□ -0.37
RPP40-201ENST00000319533 KCNJ5P48544 419 aa12.76□□□□□ -0.37
RPP40-201ENST00000319533 NCBP2P52298 156 aaKnown RBP eCLIP12.76□□□□□ -0.37
RPP40-201ENST00000319533 PRR5P85299 388 aa12.76□□□□□ -0.37
RPP40-201ENST00000319533 ZNF763Q0D2J5 394 aa12.76□□□□□ -0.37
RPP40-201ENST00000319533 C2orf80Q0P641 193 aa12.76□□□□□ -0.37
RPP40-201ENST00000319533 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.76□□□□□ -0.37
RPP40-201ENST00000319533 BEX5Q5H9J7 111 aa12.76□□□□□ -0.37
RPP40-201ENST00000319533 CEP85LQ5SZL2 805 aa12.76□□□□□ -0.37
RPP40-201ENST00000319533 APOOLQ6UXV4 268 aa12.76□□□□□ -0.37
RPP40-201ENST00000319533 PLEKHM3Q6ZWE6 761 aa12.76□□□□□ -0.37
RPP40-201ENST00000319533 TRIM46Q7Z4K8 759 aa12.76□□□□□ -0.37
RPP40-201ENST00000319533 CROCCP2Q86T23 111 aa12.76□□□□□ -0.37
RPP40-201ENST00000319533 MARCH3Q86UD3 253 aa12.76□□□□□ -0.37
RPP40-201ENST00000319533 OR5M1Q8NGP8 315 aa12.76□□□□□ -0.37
RPP40-201ENST00000319533 OR6K3Q8NGY3 331 aa12.76□□□□□ -0.37
RPP40-201ENST00000319533 HOXB13Q92826 284 aaPredicted RBP12.76□□□□□ -0.37
RPP40-201ENST00000319533 GFM2Q969S9 779 aaKnown RBP12.76□□□□□ -0.37
RPP40-201ENST00000319533 ARL8AQ96BM9 186 aa12.76□□□□□ -0.37
RPP40-201ENST00000319533 ELP4Q96EB1 424 aa12.76□□□□□ -0.37
RPP40-201ENST00000319533 TMEM204Q9BSN7 226 aa12.76□□□□□ -0.37
RPP40-201ENST00000319533 GATA5Q9BWX5 397 aaPredicted RBP12.76□□□□□ -0.37
RPP40-201ENST00000319533 EBPLQ9BY08 206 aa12.76□□□□□ -0.37
RPP40-201ENST00000319533 GLIPR2Q9H4G4 154 aa12.76□□□□□ -0.37
RPP40-201ENST00000319533 EML4Q9HC35 981 aaKnown RBP12.76□□□□□ -0.37
RPP40-201ENST00000319533 Q9N2J8 555 aa12.76□□□□□ -0.37
RPP40-201ENST00000319533 MYNNQ9NPC7 610 aa12.76□□□□□ -0.37
RPP40-201ENST00000319533 MRTO4Q9UKD2 239 aaKnown RBP12.76□□□□□ -0.37
RPP40-201ENST00000319533 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.75□□□□□ -0.37
RPP40-201ENST00000319533 COL6A5A8TX70 2615 aa12.75□□□□□ -0.37
RPP40-201ENST00000319533 SLC28A1O00337 649 aa12.75□□□□□ -0.37
RPP40-201ENST00000319533 RGS14O43566 566 aa12.75□□□□□ -0.37
RPP40-201ENST00000319533 NPHS1O60500 1241 aa12.75□□□□□ -0.37
RPP40-201ENST00000319533 SS18L1O75177 396 aaPredicted RBP12.75□□□□□ -0.37
RPP40-201ENST00000319533 RSL1D1O76021 490 aaKnown RBP12.75□□□□□ -0.37
RPP40-201ENST00000319533 CNOT4O95628 575 aaKnown RBP12.75□□□□□ -0.37
RPP40-201ENST00000319533 PCSK6P29122 969 aa12.75□□□□□ -0.37
RPP40-201ENST00000319533 ALDH3A1P30838 453 aa12.75□□□□□ -0.37
RPP40-201ENST00000319533 MAP3K8P41279 467 aa12.75□□□□□ -0.37
RPP40-201ENST00000319533 CLK3P49761 638 aaKnown RBP12.75□□□□□ -0.37
RPP40-201ENST00000319533 PSMD4P55036 377 aaKnown RBP12.75□□□□□ -0.37
RPP40-201ENST00000319533 C17orf67Q0P5P2 114 aa12.75□□□□□ -0.37
RPP40-201ENST00000319533 STX5Q13190 355 aa12.75□□□□□ -0.37
RPP40-201ENST00000319533 TTMPQ5BVD1 217 aa12.75□□□□□ -0.37
RPP40-201ENST00000319533 SH2D4BQ5SQS7 431 aa12.75□□□□□ -0.37
RPP40-201ENST00000319533 ANKRD34AQ69YU3 496 aa12.75□□□□□ -0.37
RPP40-201ENST00000319533 TMEM107Q6UX40 140 aa12.75□□□□□ -0.37
RPP40-201ENST00000319533 FAM76AQ8TAV0 307 aa12.75□□□□□ -0.37
RPP40-201ENST00000319533 ZC3HAV1LQ96H79 300 aaKnown RBP12.75□□□□□ -0.37
RPP40-201ENST00000319533 ADGRG7Q96K78 797 aa12.75□□□□□ -0.37
RPP40-201ENST00000319533 AMDHD1Q96NU7 426 aa12.75□□□□□ -0.37
RPP40-201ENST00000319533 KLHL4Q9C0H6 718 aa12.75□□□□□ -0.37
RPP40-201ENST00000319533 OR10A4Q9H209 315 aa12.75□□□□□ -0.37
RPP40-201ENST00000319533 CENPHQ9H3R5 247 aa12.75□□□□□ -0.37
RPP40-201ENST00000319533 SLC17A7Q9P2U7 560 aa12.75□□□□□ -0.37
RPP40-201ENST00000319533 FIS1Q9Y3D6 152 aa12.75□□□□□ -0.37
RPP40-201ENST00000319533 ATRQ13535 2644 aa12.74□□□□□ -0.37
RPP40-201ENST00000319533 C7orf72A4D263 438 aa12.74□□□□□ -0.37
RPP40-201ENST00000319533 SMAD7O15105 426 aaKnown RBP12.74□□□□□ -0.37
RPP40-201ENST00000319533 UTS2O95399 124 aa12.74□□□□□ -0.37
RPP40-201ENST00000319533 ANGPTL1O95841 491 aa12.74□□□□□ -0.37
RPP40-201ENST00000319533 MYZAPP0CAP1 466 aa12.74□□□□□ -0.37
RPP40-201ENST00000319533 NEFHP12036 1026 aa12.74□□□□□ -0.37
RPP40-201ENST00000319533 ZNF17P17021 662 aa12.74□□□□□ -0.37
RPP40-201ENST00000319533 SERPINB5P36952 375 aa12.74□□□□□ -0.37
RPP40-201ENST00000319533 SLC6A8P48029 635 aa12.74□□□□□ -0.37
RPP40-201ENST00000319533 CAPRIN1Q14444 709 aaKnown RBP12.74□□□□□ -0.37
RPP40-201ENST00000319533 ZNHIT3Q15649 155 aaPredicted RBP12.74□□□□□ -0.37
RPP40-201ENST00000319533 CTU2Q2VPK5 515 aaKnown RBP12.74□□□□□ -0.37
RPP40-201ENST00000319533 CLEC6AQ6EIG7 209 aa12.74□□□□□ -0.37
RPP40-201ENST00000319533 STAC2Q6ZMT1 411 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms