RNA–Protein interactions for RNA: ENST00000318220.10

NBPF3-201, Transcript of NBPF member 3, humanhuman

TSL 2

Gene NBPF3, Length 4,401 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3-201ENST00000318220 MUC13Q9H3R2 512 aa12.36□□□□□ -0.43
NBPF3-201ENST00000318220 MMACHCQ9Y4U1 282 aa12.36□□□□□ -0.43
NBPF3-201ENST00000318220 NPFFR2Q9Y5X5 522 aa12.36□□□□□ -0.43
NBPF3-201ENST00000318220 TRAV17A0A0B4J275 112 aa12.36□□□□□ -0.43
NBPF3-201ENST00000318220 LILRA5A6NI73 299 aa12.36□□□□□ -0.43
NBPF3-201ENST00000318220 FAM90A27PA6NNH2 459 aa12.36□□□□□ -0.43
NBPF3-201ENST00000318220 GALR2O43603 387 aaPredicted RBP12.36□□□□□ -0.43
NBPF3-201ENST00000318220 MED26O95402 600 aa12.36□□□□□ -0.43
NBPF3-201ENST00000318220 STSP08842 583 aa12.36□□□□□ -0.43
NBPF3-201ENST00000318220 APLNRP35414 380 aa12.36□□□□□ -0.43
NBPF3-201ENST00000318220 CSNK1A1P48729 337 aa12.36□□□□□ -0.43
NBPF3-201ENST00000318220 HSD17B7P56937 341 aa12.36□□□□□ -0.43
NBPF3-201ENST00000318220 DCAF7P61962 342 aa12.36□□□□□ -0.43
NBPF3-201ENST00000318220 RBBP4Q09028 425 aa12.36□□□□□ -0.43
NBPF3-201ENST00000318220 TMEM105Q8N8V8 129 aa12.36□□□□□ -0.43
NBPF3-201ENST00000318220 OR52E2Q8NGJ4 325 aa12.36□□□□□ -0.43
NBPF3-201ENST00000318220 OR4C15Q8NGM1 316 aa12.36□□□□□ -0.43
NBPF3-201ENST00000318220 ZNF831Q5JPB2 1677 aa12.36□□□□□ -0.43
NBPF3-201ENST00000318220 FTCDNL1E5RQL4 147 aa12.36□□□□□ -0.43
NBPF3-201ENST00000318220 HOXB3P14651 431 aaPredicted RBP12.36□□□□□ -0.43
NBPF3-201ENST00000318220 YBX1P67809 324 aaKnown RBP12.36□□□□□ -0.43
NBPF3-201ENST00000318220 SPRED3Q2MJR0 410 aa12.36□□□□□ -0.43
NBPF3-201ENST00000318220 SHQ1Q6PI26 577 aaKnown RBP12.36□□□□□ -0.43
NBPF3-201ENST00000318220 ZCCHC7Q8N3Z6 543 aaKnown RBP12.36□□□□□ -0.43
NBPF3-201ENST00000318220 GOT1L1Q8NHS2 421 aaPredicted RBP12.36□□□□□ -0.43
NBPF3-201ENST00000318220 PHOX2BQ99453 314 aa12.36□□□□□ -0.43
NBPF3-201ENST00000318220 USB1Q9BQ65 265 aaKnown RBP12.36□□□□□ -0.43
NBPF3-201ENST00000318220 CHCHD6Q9BRQ6 235 aa12.36□□□□□ -0.43
NBPF3-201ENST00000318220 MROQ9BYG7 248 aa12.36□□□□□ -0.43
NBPF3-201ENST00000318220 OR52A5Q9H2C5 316 aa12.36□□□□□ -0.43
NBPF3-201ENST00000318220 EMC3Q9P0I2 261 aa12.36□□□□□ -0.43
NBPF3-201ENST00000318220 DAPP1Q9UN19 280 aa12.36□□□□□ -0.43
NBPF3-201ENST00000318220 CSNK1G3Q9Y6M4 447 aa12.36□□□□□ -0.43
NBPF3-201ENST00000318220 GXYLT2A0PJZ3 443 aa12.36□□□□□ -0.43
NBPF3-201ENST00000318220 LNP1A1A4G5 178 aa12.36□□□□□ -0.43
NBPF3-201ENST00000318220 ZNF264O43296 627 aa12.36□□□□□ -0.43
NBPF3-201ENST00000318220 FUT1P19526 365 aa12.36□□□□□ -0.43
NBPF3-201ENST00000318220 CARD18P57730 90 aa12.36□□□□□ -0.43
NBPF3-201ENST00000318220 IQCCQ4KMZ1 466 aa12.36□□□□□ -0.43
NBPF3-201ENST00000318220 CRTC2Q53ET0 693 aaPredicted RBP12.36□□□□□ -0.43
NBPF3-201ENST00000318220 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.36□□□□□ -0.43
NBPF3-201ENST00000318220 TCTN3Q6NUS6 607 aa12.36□□□□□ -0.43
NBPF3-201ENST00000318220 ZER1Q7Z7L7 766 aa12.36□□□□□ -0.43
NBPF3-201ENST00000318220 KDM8Q8N371 416 aa12.36□□□□□ -0.43
NBPF3-201ENST00000318220 ANKFN1Q8N957 763 aa12.36□□□□□ -0.43
NBPF3-201ENST00000318220 CRELD1Q96HD1 420 aa12.36□□□□□ -0.43
NBPF3-201ENST00000318220 NOSIPQ9Y314 301 aaKnown RBP12.36□□□□□ -0.43
NBPF3-201ENST00000318220 FOXE1O00358 373 aaPredicted RBP12.35□□□□□ -0.43
NBPF3-201ENST00000318220 MTHFD2P13995 350 aa12.35□□□□□ -0.43
NBPF3-201ENST00000318220 HOXB6P17509 224 aaKnown RBP12.35□□□□□ -0.43
NBPF3-201ENST00000318220 HBA1P69905 142 aa12.35□□□□□ -0.43
NBPF3-201ENST00000318220 MFSD13AQ14CX5 517 aa12.35□□□□□ -0.43
NBPF3-201ENST00000318220 PWWP2BQ6NUJ5 590 aa12.35□□□□□ -0.43
NBPF3-201ENST00000318220 FIP1L1Q6UN15 594 aaKnown RBP12.35□□□□□ -0.43
NBPF3-201ENST00000318220 WFDC8Q8IUA0 241 aa12.35□□□□□ -0.43
NBPF3-201ENST00000318220 CISD2Q8N5K1 135 aaKnown RBP12.35□□□□□ -0.43
NBPF3-201ENST00000318220 CA5BP1Q8WTZ4 195 aa12.35□□□□□ -0.43
NBPF3-201ENST00000318220 ALG14Q96F25 216 aa12.35□□□□□ -0.43
NBPF3-201ENST00000318220 TRIB1Q96RU8 372 aa12.35□□□□□ -0.43
NBPF3-201ENST00000318220 MRPL39Q9NYK5 338 aaKnown RBP12.35□□□□□ -0.43
NBPF3-201ENST00000318220 POMT2Q9UKY4 750 aa12.35□□□□□ -0.43
NBPF3-201ENST00000318220 SCN3AQ9NY46 2000 aa12.35□□□□□ -0.43
NBPF3-201ENST00000318220 G3V2L1 256 aa12.35□□□□□ -0.43
NBPF3-201ENST00000318220 CAPGP40121 348 aa12.35□□□□□ -0.43
NBPF3-201ENST00000318220 PTDSS1P48651 473 aaKnown RBP12.35□□□□□ -0.43
NBPF3-201ENST00000318220 TRMT12Q53H54 448 aaKnown RBP12.35□□□□□ -0.43
NBPF3-201ENST00000318220 KCTD18Q6PI47 426 aaPredicted RBP12.35□□□□□ -0.43
NBPF3-201ENST00000318220 OR2A1Q8NGT9 310 aa12.35□□□□□ -0.43
NBPF3-201ENST00000318220 BORCS8Q96FH0 119 aa12.35□□□□□ -0.43
NBPF3-201ENST00000318220 ZNF419Q96HQ0 510 aaPredicted RBP12.35□□□□□ -0.43
NBPF3-201ENST00000318220 PITHD1Q9GZP4 211 aaPredicted RBP12.35□□□□□ -0.43
NBPF3-201ENST00000318220 ZNF638Q14966 1978 aaKnown RBP12.35□□□□□ -0.43
NBPF3-201ENST00000318220 FER1L6Q2WGJ9 1857 aa12.35□□□□□ -0.43
NBPF3-201ENST00000318220 BLACEA4D250 179 aa12.35□□□□□ -0.43
NBPF3-201ENST00000318220 TRAPPC13A5PLN9 417 aa12.35□□□□□ -0.43
NBPF3-201ENST00000318220 NSA2O95478 260 aaKnown RBP12.35□□□□□ -0.43
NBPF3-201ENST00000318220 PIGAP37287 484 aa12.35□□□□□ -0.43
NBPF3-201ENST00000318220 EMP3P54852 163 aa12.35□□□□□ -0.43
NBPF3-201ENST00000318220 MARCH3Q86UD3 253 aa12.35□□□□□ -0.43
NBPF3-201ENST00000318220 METTL4Q8N3J2 472 aa12.35□□□□□ -0.43
NBPF3-201ENST00000318220 FTMTQ8N4E7 242 aa12.35□□□□□ -0.43
NBPF3-201ENST00000318220 EXD3Q8N9H8 876 aa12.35□□□□□ -0.43
NBPF3-201ENST00000318220 NPRL2Q8WTW4 380 aa12.35□□□□□ -0.43
NBPF3-201ENST00000318220 PDLIM5Q96HC4 596 aaKnown RBP12.35□□□□□ -0.43
NBPF3-201ENST00000318220 SLC46A1Q96NT5 459 aa12.35□□□□□ -0.43
NBPF3-201ENST00000318220 DPH1Q9BZG8 443 aa12.35□□□□□ -0.43
NBPF3-201ENST00000318220 DNAJB11Q9UBS4 358 aa12.35□□□□□ -0.43
NBPF3-201ENST00000318220 PCDHA9Q9Y5H5 950 aa12.35□□□□□ -0.43
NBPF3-201ENST00000318220 ZNF670-ZNF695F2Z2N8 137 aa12.34□□□□□ -0.43
NBPF3-201ENST00000318220 RGS10O43665 173 aa12.34□□□□□ -0.43
NBPF3-201ENST00000318220 SIPA1L3O60292 1781 aaPredicted RBP12.34□□□□□ -0.43
NBPF3-201ENST00000318220 RPL34P49207 117 aaKnown RBP12.34□□□□□ -0.43
NBPF3-201ENST00000318220 C17orf67Q0P5P2 114 aa12.34□□□□□ -0.43
NBPF3-201ENST00000318220 TRIP11Q15643 1979 aa12.34□□□□□ -0.43
NBPF3-201ENST00000318220 SLC36A3Q495N2 470 aa12.34□□□□□ -0.43
NBPF3-201ENST00000318220 SLC6A19Q695T7 634 aa12.34□□□□□ -0.43
NBPF3-201ENST00000318220 TRILQ7L0X0 811 aa12.34□□□□□ -0.43
NBPF3-201ENST00000318220 BHLHA9Q7RTU4 235 aa12.34□□□□□ -0.43
NBPF3-201ENST00000318220 RELL1Q8IUW5 271 aa12.34□□□□□ -0.43
NBPF3-201ENST00000318220 SLC16A11Q8NCK7 471 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms