RNA–Protein interactions for RNA: ENST00000316308.8

CLK4-201, Transcript of CDC like kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK4, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-201ENST00000316308 NDUFA9Q16795 377 aa13.72□□□□□ -0.21
CLK4-201ENST00000316308 AADACL4Q5VUY2 407 aa13.72□□□□□ -0.21
CLK4-201ENST00000316308 SLC36A4Q6YBV0 504 aa13.72□□□□□ -0.21
CLK4-201ENST00000316308 TAF8Q7Z7C8 310 aa13.72□□□□□ -0.21
CLK4-201ENST00000316308 ABI3BPQ7Z7G0 1075 aa13.72□□□□□ -0.21
CLK4-201ENST00000316308 CPOQ8IVL8 374 aa13.72□□□□□ -0.21
CLK4-201ENST00000316308 CA13Q8N1Q1 262 aa13.72□□□□□ -0.21
CLK4-201ENST00000316308 SLC44A3Q8N4M1 653 aa13.72□□□□□ -0.21
CLK4-201ENST00000316308 ZNF485Q8NCK3 441 aa13.72□□□□□ -0.21
CLK4-201ENST00000316308 GRHL3Q8TE85 626 aa13.72□□□□□ -0.21
CLK4-201ENST00000316308 ANKRD9Q96BM1 317 aaPredicted RBP13.72□□□□□ -0.21
CLK4-201ENST00000316308 C1GALT1C1Q96EU7 318 aa13.72□□□□□ -0.21
CLK4-201ENST00000316308 TOE1Q96GM8 510 aaKnown RBP13.72□□□□□ -0.21
CLK4-201ENST00000316308 MSLNLQ96KJ4 702 aa13.72□□□□□ -0.21
CLK4-201ENST00000316308 PTCHD1Q96NR3 888 aa13.72□□□□□ -0.21
CLK4-201ENST00000316308 NEDD4LQ96PU5 975 aa13.72□□□□□ -0.21
CLK4-201ENST00000316308 GPR174Q9BXC1 333 aa13.72□□□□□ -0.21
CLK4-201ENST00000316308 ISG20L2Q9H9L3 353 aaKnown RBP13.72□□□□□ -0.21
CLK4-201ENST00000316308 FBXL4Q9UKA2 621 aa13.72□□□□□ -0.21
CLK4-201ENST00000316308 HEATR5AQ86XA9 2040 aa13.71□□□□□ -0.21
CLK4-201ENST00000316308 SLC35F4A4IF30 521 aa13.71□□□□□ -0.21
CLK4-201ENST00000316308 CLUP10909 449 aa13.71□□□□□ -0.21
CLK4-201ENST00000316308 GSTM3P21266 225 aa13.71□□□□□ -0.21
CLK4-201ENST00000316308 SOX6P35712 828 aa13.71□□□□□ -0.21
CLK4-201ENST00000316308 EIF2B2P49770 351 aaKnown RBP13.71□□□□□ -0.21
CLK4-201ENST00000316308 WNT4P56705 351 aa13.71□□□□□ -0.21
CLK4-201ENST00000316308 UBE2IP63279 158 aaKnown RBP13.71□□□□□ -0.21
CLK4-201ENST00000316308 ZNF155Q12901 538 aaPredicted RBP13.71□□□□□ -0.21
CLK4-201ENST00000316308 CCINQ13939 588 aa13.71□□□□□ -0.21
CLK4-201ENST00000316308 FAM53BQ14153 422 aa13.71□□□□□ -0.21
CLK4-201ENST00000316308 SLC25A30Q5SVS4 291 aa13.71□□□□□ -0.21
CLK4-201ENST00000316308 PRAMEF8Q5VWM4 474 aa13.71□□□□□ -0.21
CLK4-201ENST00000316308 PRAMEF7Q5VXH5 474 aa13.71□□□□□ -0.21
CLK4-201ENST00000316308 MBOAT2Q6ZWT7 520 aa13.71□□□□□ -0.21
CLK4-201ENST00000316308 PEX5LQ8IYB4 626 aa13.71□□□□□ -0.21
CLK4-201ENST00000316308 CSNK1A1LQ8N752 337 aa13.71□□□□□ -0.21
CLK4-201ENST00000316308 HDHD5Q9BXW7 423 aa13.71□□□□□ -0.21
CLK4-201ENST00000316308 ZNF350Q9GZX5 532 aa13.71□□□□□ -0.21
CLK4-201ENST00000316308 MIXL1Q9H2W2 232 aa13.71□□□□□ -0.21
CLK4-201ENST00000316308 TIGARQ9NQ88 270 aa13.71□□□□□ -0.21
CLK4-201ENST00000316308 USP36Q9P275 1121 aaKnown RBP13.71□□□□□ -0.21
CLK4-201ENST00000316308 PHF11Q9UIL8 331 aa13.71□□□□□ -0.21
CLK4-201ENST00000316308 TBC1D24Q9ULP9 559 aa13.71□□□□□ -0.21
CLK4-201ENST00000316308 PEX16Q9Y5Y5 336 aa13.71□□□□□ -0.21
CLK4-201ENST00000316308 KDM4EB2RXH2 506 aaPredicted RBP13.71□□□□□ -0.22
CLK4-201ENST00000316308 B4DGG1 531 aa13.71□□□□□ -0.22
CLK4-201ENST00000316308 LOC110117498-PIK3R3F6TDL0 507 aa13.71□□□□□ -0.22
CLK4-201ENST00000316308 GNB5O14775 395 aa13.71□□□□□ -0.22
CLK4-201ENST00000316308 HRO43593 1189 aa13.71□□□□□ -0.22
CLK4-201ENST00000316308 GALR3O60755 368 aaPredicted RBP13.71□□□□□ -0.22
CLK4-201ENST00000316308 LYPD3O95274 346 aa13.71□□□□□ -0.22
CLK4-201ENST00000316308 IGKV1D-16P01601 117 aa13.71□□□□□ -0.22
CLK4-201ENST00000316308 CPEP16870 476 aa13.71□□□□□ -0.22
CLK4-201ENST00000316308 GCGRP47871 477 aa13.71□□□□□ -0.22
CLK4-201ENST00000316308 MAZP56270 477 aaKnown RBP13.71□□□□□ -0.22
CLK4-201ENST00000316308 CBX3Q13185 183 aa13.71□□□□□ -0.22
CLK4-201ENST00000316308 FZD2Q14332 565 aa13.71□□□□□ -0.22
CLK4-201ENST00000316308 DECR1Q16698 335 aa13.71□□□□□ -0.22
CLK4-201ENST00000316308 TIMM50Q3ZCQ8 353 aa13.71□□□□□ -0.22
CLK4-201ENST00000316308 PLBD1Q6P4A8 553 aa13.71□□□□□ -0.22
CLK4-201ENST00000316308 COX18Q8N8Q8 333 aa13.71□□□□□ -0.22
CLK4-201ENST00000316308 CAMKVQ8NCB2 501 aa13.71□□□□□ -0.22
CLK4-201ENST00000316308 GPBAR1Q8TDU6 330 aa13.71□□□□□ -0.22
CLK4-201ENST00000316308 ASB12Q8WXK4 309 aa13.71□□□□□ -0.22
CLK4-201ENST00000316308 RERGQ96A58 199 aaPredicted RBP13.71□□□□□ -0.22
CLK4-201ENST00000316308 TMED9Q9BVK6 235 aa13.71□□□□□ -0.22
CLK4-201ENST00000316308 TPSD1Q9BZJ3 242 aa13.71□□□□□ -0.22
CLK4-201ENST00000316308 UBQLN3Q9H347 655 aa13.71□□□□□ -0.22
CLK4-201ENST00000316308 PIGUQ9H490 435 aa13.71□□□□□ -0.22
CLK4-201ENST00000316308 ANKHQ9HCJ1 492 aa13.71□□□□□ -0.22
CLK4-201ENST00000316308 ABCB9Q9NP78 766 aa13.71□□□□□ -0.22
CLK4-201ENST00000316308 KLHL28Q9NXS3 571 aa13.71□□□□□ -0.22
CLK4-201ENST00000316308 HCN3Q9P1Z3 774 aa13.71□□□□□ -0.22
CLK4-201ENST00000316308 SEC14L4Q9UDX3 406 aa13.71□□□□□ -0.22
CLK4-201ENST00000316308 PLEKHB1Q9UF11 243 aaPredicted RBP13.71□□□□□ -0.22
CLK4-201ENST00000316308 CBLCQ9ULV8 474 aa13.71□□□□□ -0.22
CLK4-201ENST00000316308 SCML1Q9UN30 329 aa13.71□□□□□ -0.22
CLK4-201ENST00000316308 CLCA2Q9UQC9 943 aa13.71□□□□□ -0.22
CLK4-201ENST00000316308 A3GALT2U3KPV4 340 aa13.71□□□□□ -0.22
CLK4-201ENST00000316308 COL4A2P08572 1712 aa13.7□□□□□ -0.22
CLK4-201ENST00000316308 TRAV27A0A087WT01 109 aa13.7□□□□□ -0.22
CLK4-201ENST00000316308 A0A0A6YYC8 382 aaPredicted RBP13.7□□□□□ -0.22
CLK4-201ENST00000316308 DUXAA6NLW8 204 aa13.7□□□□□ -0.22
CLK4-201ENST00000316308 I3L1I5 382 aaPredicted RBP13.7□□□□□ -0.22
CLK4-201ENST00000316308 KDM1AO60341 852 aa13.7□□□□□ -0.22
CLK4-201ENST00000316308 CBX7O95931 251 aa13.7□□□□□ -0.22
CLK4-201ENST00000316308 FPR3P25089 353 aa13.7□□□□□ -0.22
CLK4-201ENST00000316308 TLX1P31314 330 aaPredicted RBP13.7□□□□□ -0.22
CLK4-201ENST00000316308 AKT2P31751 481 aa13.7□□□□□ -0.22
CLK4-201ENST00000316308 NKX2-5P52952 324 aaPredicted RBP13.7□□□□□ -0.22
CLK4-201ENST00000316308 ZNF45Q02386 682 aa13.7□□□□□ -0.22
CLK4-201ENST00000316308 LARS2Q15031 903 aaKnown RBP13.7□□□□□ -0.22
CLK4-201ENST00000316308 OR1Q1Q15612 314 aa13.7□□□□□ -0.22
CLK4-201ENST00000316308 NDUFAF6Q330K2 333 aa13.7□□□□□ -0.22
CLK4-201ENST00000316308 CRTC2Q53ET0 693 aaPredicted RBP13.7□□□□□ -0.22
CLK4-201ENST00000316308 SPANXN2Q5MJ10 180 aa13.7□□□□□ -0.22
CLK4-201ENST00000316308 VASNQ6EMK4 673 aa13.7□□□□□ -0.22
CLK4-201ENST00000316308 CCBE1Q6UXH8 406 aaPredicted RBP13.7□□□□□ -0.22
CLK4-201ENST00000316308 ABHD13Q7L211 337 aa13.7□□□□□ -0.22
CLK4-201ENST00000316308 CNOT9Q92600 299 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms