RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 DKK3Q9UBP4 350 aa4.58□□□□□ -1.68
CKS1B-201ENST00000308987 PSORS1C1Q9UIG5 152 aa4.58□□□□□ -1.68
CKS1B-201ENST00000308987 ERVK-11Q9UQG0 969 aa4.58□□□□□ -1.68
CKS1B-201ENST00000308987 RUVBL1Q9Y265 456 aaKnown RBP4.58□□□□□ -1.68
CKS1B-201ENST00000308987 TRAPPC4Q9Y296 219 aa4.58□□□□□ -1.68
CKS1B-201ENST00000308987 POFUT2Q9Y2G5 429 aa4.58□□□□□ -1.68
CKS1B-201ENST00000308987 DLGAP4Q9Y2H0 992 aa4.58□□□□□ -1.68
CKS1B-201ENST00000308987 IFT52Q9Y366 437 aa4.58□□□□□ -1.68
CKS1B-201ENST00000308987 SAMHD1Q9Y3Z3 626 aaKnown RBP4.58□□□□□ -1.68
CKS1B-201ENST00000308987 DGKBQ9Y6T7 804 aa4.58□□□□□ -1.68
CKS1B-201ENST00000308987 F8P00451 2351 aa4.58□□□□□ -1.68
CKS1B-201ENST00000308987 ZNF469Q96JG9 3925 aaPredicted RBP4.58□□□□□ -1.68
CKS1B-201ENST00000308987 MTORP42345 2549 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 PKDREJQ9NTG1 2253 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 MYO7BQ6PIF6 2116 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 NF1P21359 2839 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 IGHV5-10-1A0A0J9YXX1 117 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 TSPAN11A1L157 253 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 EFCAB10A6NFE3 127 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 CLCA1A8K7I4 914 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 IQCF5A8MTL0 148 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 MAGEB17A8MXT2 336 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 H0YIV9 168 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 GFYI3L273 518 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 CACNB4O00305 520 aaPredicted RBP4.57□□□□□ -1.68
CKS1B-201ENST00000308987 QSOX1O00391 747 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 HAT1O14929 419 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 NKX2-8O15522 239 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 AIREO43918 545 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 MITFO75030 526 aaPredicted RBP4.57□□□□□ -1.68
CKS1B-201ENST00000308987 MYO1DO94832 1006 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 RASGRP1O95267 797 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 ZNF682O95780 498 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 GUCA1CO95843 209 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 IFNA14P01570 189 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 APOA1P02647 267 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 PCCBP05166 539 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 CDK1P06493 297 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 ALPIP09923 528 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 HIST1H2AGP0C0S8 130 aaPredicted RBP4.57□□□□□ -1.68
CKS1B-201ENST00000308987 OR56A5P0C7T3 313 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 RNF224P0DH78 156 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 TRAPPC2P0DI81 140 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 TRAPPC2BP0DI82 140 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 PIPP12273 146 aaPredicted RBP4.57□□□□□ -1.68
CKS1B-201ENST00000308987 MYCLP1P12525 358 aaPredicted RBP4.57□□□□□ -1.68
CKS1B-201ENST00000308987 LIFP15018 202 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 BPIP17213 487 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 EPORP19235 508 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 HIST1H2ADP20671 130 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 CYP2A7P20853 494 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 CD1CP29017 333 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 FMO3P31513 532 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 S100A5P33763 92 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 KRT20P35900 424 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 RPL3P39023 403 aaKnown RBP4.57□□□□□ -1.68
CKS1B-201ENST00000308987 MMP12P39900 470 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 GSSP48637 474 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 PRIM2P49643 509 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 MAZP56270 477 aaKnown RBP4.57□□□□□ -1.68
CKS1B-201ENST00000308987 VBP1P61758 197 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 COPZ1P61923 177 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 SNRPD1P62314 119 aaKnown RBP4.57□□□□□ -1.68
CKS1B-201ENST00000308987 VLDLRP98155 873 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 SELENBP1Q13228 472 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 ARHGEF7Q14155 803 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 E2F2Q14209 437 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 IRF3Q14653 427 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 PTPRRQ15256 657 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 ELOCQ15369 112 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 C18orf21Q32NC0 220 aaPredicted RBP4.57□□□□□ -1.68
CKS1B-201ENST00000308987 GTDC1Q4AE62 458 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 C14orf28Q4W4Y0 310 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 ATAD3BQ5T9A4 648 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 ATP1A1-AS1Q5TC04 95 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 NKAIN2Q5VXU1 208 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 RNLSQ5VYX0 342 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 MBNL2Q5VZF2 373 aaKnown RBP4.57□□□□□ -1.68
CKS1B-201ENST00000308987 NOXRED1Q6NXP6 359 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 TMEM53Q6P2H8 277 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 CCDC80Q76M96 950 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 ZNF367Q7RTV3 350 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 TIPARPQ7Z3E1 657 aaKnown RBP4.57□□□□□ -1.68
CKS1B-201ENST00000308987 AKAP14Q86UN6 197 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 SLC22A16Q86VW1 577 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 PRIMA1Q86XR5 153 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 PTOV1Q86YD1 416 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 ENTHD1Q8IYW4 607 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 DNAJC22Q8N4W6 341 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 BMPERQ8N8U9 685 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 ATG16L2Q8NAA4 619 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 C11orf65Q8NCR3 313 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 FAM46DQ8NEK8 389 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 GOT1L1Q8NHS2 421 aaPredicted RBP4.57□□□□□ -1.68
CKS1B-201ENST00000308987 NDNFQ8TB73 568 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 CXorf40AQ8TE69 158 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 ATL1Q8WXF7 558 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 COQ8BQ96D53 544 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 EID2BQ96D98 161 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 RNF31Q96EP0 1072 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms