RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 GALNT9Q9HCQ5 603 aa12.48□□□□□ -0.41
DDX54-201ENST00000306014 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.48□□□□□ -0.41
DDX54-201ENST00000306014 GRHPRQ9UBQ7 328 aa12.48□□□□□ -0.41
DDX54-201ENST00000306014 PTPRFP10586 1907 aa12.48□□□□□ -0.41
DDX54-201ENST00000306014 SIPA1L1O43166 1804 aa12.48□□□□□ -0.41
DDX54-201ENST00000306014 GTF2F2P13984 249 aa12.48□□□□□ -0.41
DDX54-201ENST00000306014 ARSBP15848 533 aa12.48□□□□□ -0.41
DDX54-201ENST00000306014 HTR3AP46098 478 aa12.48□□□□□ -0.41
DDX54-201ENST00000306014 ZMAT1Q5H9K5 638 aa12.48□□□□□ -0.41
DDX54-201ENST00000306014 ARHGAP11AQ6P4F7 1023 aa12.48□□□□□ -0.41
DDX54-201ENST00000306014 NANOGP1Q8N7R0 232 aa12.48□□□□□ -0.41
DDX54-201ENST00000306014 TM9SF4Q92544 642 aa12.48□□□□□ -0.41
DDX54-201ENST00000306014 C4orf36Q96KX1 117 aa12.48□□□□□ -0.41
DDX54-201ENST00000306014 COQ10AQ96MF6 247 aa12.48□□□□□ -0.41
DDX54-201ENST00000306014 HRASLS2Q9NWW9 162 aa12.48□□□□□ -0.41
DDX54-201ENST00000306014 ZAR1LA6NP61 321 aa12.48□□□□□ -0.41
DDX54-201ENST00000306014 KHNYNO15037 678 aaKnown RBP12.48□□□□□ -0.41
DDX54-201ENST00000306014 LRRTM2O43300 516 aa12.48□□□□□ -0.41
DDX54-201ENST00000306014 CLEC3AO75596 197 aa12.48□□□□□ -0.41
DDX54-201ENST00000306014 SNRPGP62308 76 aaKnown RBP12.48□□□□□ -0.41
DDX54-201ENST00000306014 FAPQ12884 760 aa12.48□□□□□ -0.41
DDX54-201ENST00000306014 AMZ1Q400G9 498 aa12.48□□□□□ -0.41
DDX54-201ENST00000306014 SYT14P1Q58G82 188 aa12.48□□□□□ -0.41
DDX54-201ENST00000306014 OR2L5Q8NG80 312 aa12.48□□□□□ -0.41
DDX54-201ENST00000306014 THAP4Q8WY91 577 aa12.48□□□□□ -0.41
DDX54-201ENST00000306014 TM4SF18Q96CE8 201 aa12.48□□□□□ -0.41
DDX54-201ENST00000306014 INIPQ9NRY2 104 aa12.48□□□□□ -0.41
DDX54-201ENST00000306014 TAAR2Q9P1P5 351 aa12.48□□□□□ -0.41
DDX54-201ENST00000306014 ITGB7P26010 798 aa12.47□□□□□ -0.41
DDX54-201ENST00000306014 DDOSTP39656 456 aa12.47□□□□□ -0.41
DDX54-201ENST00000306014 ACTA2P62736 377 aa12.47□□□□□ -0.41
DDX54-201ENST00000306014 ACTG2P63267 376 aa12.47□□□□□ -0.41
DDX54-201ENST00000306014 GFOD2Q3B7J2 385 aa12.47□□□□□ -0.41
DDX54-201ENST00000306014 ZC3H14Q6PJT7 736 aaKnown RBP12.47□□□□□ -0.41
DDX54-201ENST00000306014 LRRC28Q86X40 367 aaPredicted RBP12.47□□□□□ -0.41
DDX54-201ENST00000306014 KIF18BQ86Y91 864 aa12.47□□□□□ -0.41
DDX54-201ENST00000306014 OR7G1Q8NGA0 311 aa12.47□□□□□ -0.41
DDX54-201ENST00000306014 NXPE2Q96DL1 559 aa12.47□□□□□ -0.41
DDX54-201ENST00000306014 MS4A4EQ96PG1 132 aa12.47□□□□□ -0.41
DDX54-201ENST00000306014 NDRG2Q9UN36 371 aaKnown RBP12.47□□□□□ -0.41
DDX54-201ENST00000306014 SCDO00767 359 aa12.47□□□□□ -0.41
DDX54-201ENST00000306014 ABLIM3O94929 683 aa12.47□□□□□ -0.41
DDX54-201ENST00000306014 ETV5P41161 510 aa12.47□□□□□ -0.41
DDX54-201ENST00000306014 ETV1P50549 477 aa12.47□□□□□ -0.41
DDX54-201ENST00000306014 TOMM20Q15388 145 aa12.47□□□□□ -0.41
DDX54-201ENST00000306014 KLHL26Q53HC5 615 aa12.47□□□□□ -0.41
DDX54-201ENST00000306014 ZNF550Q7Z398 422 aa12.47□□□□□ -0.41
DDX54-201ENST00000306014 INO80EQ8NBZ0 244 aaPredicted RBP12.47□□□□□ -0.41
DDX54-201ENST00000306014 LSM14AQ8ND56 463 aaKnown RBP12.47□□□□□ -0.41
DDX54-201ENST00000306014 SMPDL3BQ92485 455 aa12.47□□□□□ -0.41
DDX54-201ENST00000306014 OPALINQ96PE5 141 aa12.47□□□□□ -0.41
DDX54-201ENST00000306014 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.47□□□□□ -0.41
DDX54-201ENST00000306014 C1GALT1Q9NS00 363 aa12.47□□□□□ -0.41
DDX54-201ENST00000306014 MLXQ9UH92 298 aa12.47□□□□□ -0.41
DDX54-201ENST00000306014 GPR34Q9UPC5 381 aa12.47□□□□□ -0.41
DDX54-201ENST00000306014 F5P12259 2224 aa12.47□□□□□ -0.41
DDX54-201ENST00000306014 NRXN2Q9P2S2 1712 aa12.47□□□□□ -0.41
DDX54-201ENST00000306014 OR6C74A6NCV1 312 aa12.47□□□□□ -0.41
DDX54-201ENST00000306014 PLPP1O14494 284 aa12.47□□□□□ -0.41
DDX54-201ENST00000306014 MAS1P04201 325 aa12.47□□□□□ -0.41
DDX54-201ENST00000306014 EPCAMP16422 314 aa12.47□□□□□ -0.41
DDX54-201ENST00000306014 AKT2P31751 481 aa12.47□□□□□ -0.41
DDX54-201ENST00000306014 RRAS2P62070 204 aaPredicted RBP12.47□□□□□ -0.41
DDX54-201ENST00000306014 RPS21P63220 83 aaKnown RBP12.47□□□□□ -0.41
DDX54-201ENST00000306014 SHC2P98077 582 aa12.47□□□□□ -0.41
DDX54-201ENST00000306014 B4GALNT1Q00973 533 aa12.47□□□□□ -0.41
DDX54-201ENST00000306014 ARHGAP19Q14CB8 494 aa12.47□□□□□ -0.41
DDX54-201ENST00000306014 HNRNPA1L2Q32P51 320 aaKnown RBP12.47□□□□□ -0.41
DDX54-201ENST00000306014 SLC25A46Q96AG3 418 aa12.47□□□□□ -0.41
DDX54-201ENST00000306014 SGTBQ96EQ0 304 aa12.47□□□□□ -0.41
DDX54-201ENST00000306014 ELMOD3Q96FG2 381 aa12.47□□□□□ -0.41
DDX54-201ENST00000306014 SLC38A3Q99624 504 aa12.47□□□□□ -0.41
DDX54-201ENST00000306014 TBL1XR1Q9BZK7 514 aa12.47□□□□□ -0.41
DDX54-201ENST00000306014 HOXD1Q9GZZ0 328 aa12.47□□□□□ -0.41
DDX54-201ENST00000306014 GLIPR2Q9H4G4 154 aa12.47□□□□□ -0.41
DDX54-201ENST00000306014 MUTYHQ9UIF7 546 aa12.47□□□□□ -0.41
DDX54-201ENST00000306014 TRAV27A0A087WT01 109 aa12.46□□□□□ -0.41
DDX54-201ENST00000306014 KAT7O95251 611 aa12.46□□□□□ -0.41
DDX54-201ENST00000306014 PAHP00439 452 aa12.46□□□□□ -0.41
DDX54-201ENST00000306014 MT-ND4P03905 459 aa12.46□□□□□ -0.41
DDX54-201ENST00000306014 POU4F2Q12837 409 aa12.46□□□□□ -0.41
DDX54-201ENST00000306014 GARNL3Q5VVW2 1013 aa12.46□□□□□ -0.41
DDX54-201ENST00000306014 ZNF527Q8NB42 609 aa12.46□□□□□ -0.41
DDX54-201ENST00000306014 BCL7CQ8WUZ0 217 aaPredicted RBP12.46□□□□□ -0.41
DDX54-201ENST00000306014 PDXPQ96GD0 296 aa12.46□□□□□ -0.41
DDX54-201ENST00000306014 CCDC120Q96HB5 630 aa12.46□□□□□ -0.41
DDX54-201ENST00000306014 LYSMD1Q96S90 227 aa12.46□□□□□ -0.41
DDX54-201ENST00000306014 MS4A8Q9BY19 250 aa12.46□□□□□ -0.41
DDX54-201ENST00000306014 NT5DC2Q9H857 520 aa12.46□□□□□ -0.41
DDX54-201ENST00000306014 NUBP2Q9Y5Y2 271 aa12.46□□□□□ -0.41
DDX54-201ENST00000306014 B4DGG1 531 aa12.46□□□□□ -0.41
DDX54-201ENST00000306014 FABP7O15540 132 aa12.46□□□□□ -0.41
DDX54-201ENST00000306014 SHC1P29353 583 aa12.46□□□□□ -0.41
DDX54-201ENST00000306014 IGFALSP35858 605 aa12.46□□□□□ -0.41
DDX54-201ENST00000306014 BAK1Q16611 211 aa12.46□□□□□ -0.41
DDX54-201ENST00000306014 ZNF750Q32MQ0 723 aa12.46□□□□□ -0.41
DDX54-201ENST00000306014 ACSM5Q6NUN0 579 aa12.46□□□□□ -0.41
DDX54-201ENST00000306014 QSOX2Q6ZRP7 698 aa12.46□□□□□ -0.41
DDX54-201ENST00000306014 KLHDC8BQ8IXV7 354 aa12.46□□□□□ -0.41
DDX54-201ENST00000306014 C10orf111Q8N326 155 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms