RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 RBMS1P29558 406 aaKnown RBP5.06□□□□□ -1.6
VPS50-202ENST00000305866 HTR1FP30939 366 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 DGKGP49619 791 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 MXD1Q05195 221 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 NAE1Q13564 534 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 CAMK1Q14012 370 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 NFE2L1Q14494 772 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 COL28A1Q2UY09 1125 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 ARSIQ5FYB1 569 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 FAM27D1Q5T7N8 215 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 HBMQ6B0K9 141 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 AUTS2Q8WXX7 1259 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 AKAP1Q92667 903 aaKnown RBP eCLIP5.06□□□□□ -1.6
VPS50-202ENST00000305866 PPCDCQ96CD2 204 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 RNFT2Q96EX2 444 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 SCLYQ96I15 445 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 PRRC1Q96M27 445 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 KCTD7Q96MP8 289 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 LRFN5Q96NI6 719 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 LRRC3BQ96PB8 259 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 OSGEPL1Q9H4B0 414 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 ZDHHC6Q9H6R6 413 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 IL21RQ9HBE5 538 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 RPRD1BQ9NQG5 326 aaKnown RBP5.06□□□□□ -1.6
VPS50-202ENST00000305866 LYARQ9NX58 379 aaKnown RBP5.06□□□□□ -1.6
VPS50-202ENST00000305866 SLC17A4Q9Y2C5 497 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 TMEM272A0A1B0GTI8 110 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 K7ESM1 405 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 DOK2O60496 412 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 ADAM11O75078 769 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 TPPPO94811 219 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 CLTBP09497 229 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 PSKH1P11801 424 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 ITGB8P26012 769 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 DPP4P27487 766 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 PRKAR1BP31321 381 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 CD96P40200 585 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 CRATP43155 626 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 CAPZA2P47755 286 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 PREPP48147 710 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 TAS2R50P59544 299 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 PPP2CBP62714 309 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 PPP2CAP67775 309 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 GNA13Q14344 377 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 SLBPQ14493 270 aaKnown RBP eCLIP5.06□□□□□ -1.6
VPS50-202ENST00000305866 TUSC1Q2TAM9 212 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 ZNF284Q2VY69 593 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 HSD17B12Q53GQ0 312 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 DDI2Q5TDH0 399 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 LCN1P1Q5VSP4 162 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 ATRAIDQ6UW56 229 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 ZNF620Q6ZNG0 422 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 GET4Q7L5D6 327 aaPredicted RBP5.06□□□□□ -1.6
VPS50-202ENST00000305866 DGLUCYQ7Z3D6 616 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 MEX3DQ86XN8 651 aaKnown RBP5.06□□□□□ -1.6
VPS50-202ENST00000305866 LYPD6Q86Y78 171 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 OR1S1Q8NH92 325 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 SCAMP4Q969E2 229 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 ASIC4Q96FT7 647 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 CAPNS2Q96L46 248 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 RAB11FIP5Q9BXF6 653 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 ADGRL4Q9HBW9 690 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 CTPS2Q9NRF8 586 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 TMEM74BQ9NUR3 256 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 AHSPQ9NZD4 102 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 PTTG3PQ9NZH4 202 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 KIF25Q9UIL4 384 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 ACSL5Q9ULC5 683 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 HEATR5AQ86XA9 2040 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 PPM1DO15297 605 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 OGG1O15527 345 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 GMDSO60547 372 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 RNGTTO60942 597 aaKnown RBP5.06□□□□□ -1.6
VPS50-202ENST00000305866 TSPAN19P0C672 248 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 ADRB3P13945 408 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 HTR2AP28223 471 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 RNF144AP50876 292 aaPredicted RBP5.06□□□□□ -1.6
VPS50-202ENST00000305866 SRP54P61011 504 aaKnown RBP5.06□□□□□ -1.6
VPS50-202ENST00000305866 ERVK-21P61565 698 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 EEF1A1P68104 462 aaKnown RBP5.06□□□□□ -1.6
VPS50-202ENST00000305866 MESP2Q0VG99 397 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 TSPAN31Q12999 210 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 ELAVL3Q14576 367 aaKnown RBP5.06□□□□□ -1.6
VPS50-202ENST00000305866 DHCR24Q15392 516 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 GRK1Q15835 563 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 DECR1Q16698 335 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 TRIM60Q495X7 471 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 C2orf27AQ580R0 203 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 PRAMEF14Q5SWL7 426 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 PRAMEF13Q5VWM6 474 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 HIST2H2AA3Q6FI13 130 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 ANKRD54Q6NXT1 300 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 SHFQ7M4L6 423 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 LRRTM4Q86VH4 590 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 SLC34A3Q8N130 599 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 KRT78Q8N1N4 520 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 ZFP41Q8N8Y5 198 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 LINC01555Q8NAE3 123 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 SPPL2AQ8TCT8 520 aa5.06□□□□□ -1.6
VPS50-202ENST00000305866 UTP15Q8TED0 518 aaKnown RBP5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms