RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 MRTO4Q9UKD2 239 aaKnown RBP13.44□□□□□ -0.26
SHCBP1-201ENST00000303383 CLDN16Q9Y5I7 305 aa13.44□□□□□ -0.26
SHCBP1-201ENST00000303383 U3KQA8 63 aa13.44□□□□□ -0.26
SHCBP1-201ENST00000303383 M0R129 80 aa13.43□□□□□ -0.26
SHCBP1-201ENST00000303383 NUDT6P53370 316 aa13.43□□□□□ -0.26
SHCBP1-201ENST00000303383 SQSTM1Q13501 440 aa13.43□□□□□ -0.26
SHCBP1-201ENST00000303383 GPR107Q5VW38 600 aa13.43□□□□□ -0.26
SHCBP1-201ENST00000303383 LAIR2Q6ISS4 152 aa13.43□□□□□ -0.26
SHCBP1-201ENST00000303383 RHBDD2Q6NTF9 364 aa13.43□□□□□ -0.26
SHCBP1-201ENST00000303383 PPP1R3BQ86XI6 285 aa13.43□□□□□ -0.26
SHCBP1-201ENST00000303383 MEX3DQ86XN8 651 aaKnown RBP13.43□□□□□ -0.26
SHCBP1-201ENST00000303383 C17orf50Q8WW18 174 aa13.43□□□□□ -0.26
SHCBP1-201ENST00000303383 FAM46AQ96IP4 442 aaKnown RBP13.43□□□□□ -0.26
SHCBP1-201ENST00000303383 C14orf105Q9NVL8 296 aa13.43□□□□□ -0.26
SHCBP1-201ENST00000303383 ZAR1LA6NP61 321 aa13.43□□□□□ -0.26
SHCBP1-201ENST00000303383 CKMT1AP12532 417 aa13.43□□□□□ -0.26
SHCBP1-201ENST00000303383 PTNP21246 168 aa13.43□□□□□ -0.26
SHCBP1-201ENST00000303383 RPS4Y1P22090 263 aaKnown RBP13.43□□□□□ -0.26
SHCBP1-201ENST00000303383 NPSR1Q6W5P4 371 aa13.43□□□□□ -0.26
SHCBP1-201ENST00000303383 NKAIN4Q8IVV8 208 aa13.43□□□□□ -0.26
SHCBP1-201ENST00000303383 STX19Q8N4C7 294 aa13.43□□□□□ -0.26
SHCBP1-201ENST00000303383 TOR1AIP2Q8NFQ8 470 aa13.43□□□□□ -0.26
SHCBP1-201ENST00000303383 RHOXF1Q8NHV9 184 aa13.43□□□□□ -0.26
SHCBP1-201ENST00000303383 PTPMT1Q8WUK0 201 aaPredicted RBP13.43□□□□□ -0.26
SHCBP1-201ENST00000303383 RORBQ92753 470 aa13.43□□□□□ -0.26
SHCBP1-201ENST00000303383 MYDGFQ969H8 173 aa13.43□□□□□ -0.26
SHCBP1-201ENST00000303383 SLC46A1Q96NT5 459 aa13.43□□□□□ -0.26
SHCBP1-201ENST00000303383 IL4I1Q96RQ9 567 aa13.43□□□□□ -0.26
SHCBP1-201ENST00000303383 COPS4Q9BT78 406 aa13.43□□□□□ -0.26
SHCBP1-201ENST00000303383 CNIH4Q9P003 139 aa13.43□□□□□ -0.26
SHCBP1-201ENST00000303383 CTSFQ9UBX1 484 aa13.43□□□□□ -0.26
SHCBP1-201ENST00000303383 TESQ9UGI8 421 aaKnown RBP13.43□□□□□ -0.26
SHCBP1-201ENST00000303383 KCNE5Q9UJ90 142 aa13.43□□□□□ -0.26
SHCBP1-201ENST00000303383 CEPT1Q9Y6K0 416 aa13.43□□□□□ -0.26
SHCBP1-201ENST00000303383 PRG2P13727 222 aa13.43□□□□□ -0.26
SHCBP1-201ENST00000303383 OR1Q1Q15612 314 aa13.43□□□□□ -0.26
SHCBP1-201ENST00000303383 C1orf94Q6P1W5 598 aa13.43□□□□□ -0.26
SHCBP1-201ENST00000303383 NRMQ8IXM6 262 aa13.43□□□□□ -0.26
SHCBP1-201ENST00000303383 CDK20Q8IZL9 346 aa13.43□□□□□ -0.26
SHCBP1-201ENST00000303383 BCORP1Q8N888 145 aa13.43□□□□□ -0.26
SHCBP1-201ENST00000303383 MORN4Q8NDC4 146 aa13.43□□□□□ -0.26
SHCBP1-201ENST00000303383 SLC2A12Q8TD20 617 aa13.43□□□□□ -0.26
SHCBP1-201ENST00000303383 ARRDC1-AS1Q9H2J1 176 aa13.43□□□□□ -0.26
SHCBP1-201ENST00000303383 KHNYNO15037 678 aaKnown RBP13.42□□□□□ -0.26
SHCBP1-201ENST00000303383 HYAL3O43820 417 aaPredicted RBP13.42□□□□□ -0.26
SHCBP1-201ENST00000303383 HBQ1P09105 142 aa13.42□□□□□ -0.26
SHCBP1-201ENST00000303383 SP9P0CG40 484 aa13.42□□□□□ -0.26
SHCBP1-201ENST00000303383 CT45A8P0DMV1 189 aa13.42□□□□□ -0.26
SHCBP1-201ENST00000303383 CT45A9P0DMV2 189 aa13.42□□□□□ -0.26
SHCBP1-201ENST00000303383 MPLP40238 635 aa13.42□□□□□ -0.26
SHCBP1-201ENST00000303383 ATP12AP54707 1039 aa13.42□□□□□ -0.26
SHCBP1-201ENST00000303383 CT45A2Q5DJT8 189 aa13.42□□□□□ -0.26
SHCBP1-201ENST00000303383 B3GNT6Q6ZMB0 384 aa13.42□□□□□ -0.26
SHCBP1-201ENST00000303383 ZNF615Q8N8J6 731 aa13.42□□□□□ -0.26
SHCBP1-201ENST00000303383 OR14A16Q8NHC5 309 aa13.42□□□□□ -0.26
SHCBP1-201ENST00000303383 GRHL3Q8TE85 626 aa13.42□□□□□ -0.26
SHCBP1-201ENST00000303383 METTL21AQ8WXB1 218 aa13.42□□□□□ -0.26
SHCBP1-201ENST00000303383 ATOH1Q92858 354 aaPredicted RBP13.42□□□□□ -0.26
SHCBP1-201ENST00000303383 EFHD2Q96C19 240 aaPredicted RBP13.42□□□□□ -0.26
SHCBP1-201ENST00000303383 Q96MT0 163 aa13.42□□□□□ -0.26
SHCBP1-201ENST00000303383 TUBA1CQ9BQE3 449 aa13.42□□□□□ -0.26
SHCBP1-201ENST00000303383 ZNF559Q9BR84 538 aa13.42□□□□□ -0.26
SHCBP1-201ENST00000303383 VN1R1Q9GZP7 353 aa13.42□□□□□ -0.26
SHCBP1-201ENST00000303383 TVP23BQ9NYZ1 205 aa13.42□□□□□ -0.26
SHCBP1-201ENST00000303383 COMMD3-BMI1R4GMX3 469 aa13.42□□□□□ -0.26
SHCBP1-201ENST00000303383 WBP4O75554 376 aaKnown RBP13.42□□□□□ -0.26
SHCBP1-201ENST00000303383 FADS2O95864 444 aaKnown RBP13.42□□□□□ -0.26
SHCBP1-201ENST00000303383 HEXBP07686 556 aa13.42□□□□□ -0.26
SHCBP1-201ENST00000303383 IGFBP1P08833 259 aaPredicted RBP13.42□□□□□ -0.26
SHCBP1-201ENST00000303383 SH3BGRP55822 239 aaPredicted RBP13.42□□□□□ -0.26
SHCBP1-201ENST00000303383 ANGPT1Q15389 498 aa13.42□□□□□ -0.26
SHCBP1-201ENST00000303383 NKAIN1Q4KMZ8 207 aa13.42□□□□□ -0.26
SHCBP1-201ENST00000303383 SLC29A4Q7RTT9 530 aa13.42□□□□□ -0.26
SHCBP1-201ENST00000303383 PRICKLE2Q7Z3G6 844 aa13.42□□□□□ -0.26
SHCBP1-201ENST00000303383 CADM2Q8N3J6 435 aa13.42□□□□□ -0.26
SHCBP1-201ENST00000303383 STT3BQ8TCJ2 826 aa13.42□□□□□ -0.26
SHCBP1-201ENST00000303383 TMEM255BQ8WV15 326 aa13.42□□□□□ -0.26
SHCBP1-201ENST00000303383 CNOT9Q92600 299 aaKnown RBP13.42□□□□□ -0.26
SHCBP1-201ENST00000303383 EVA1AQ9H8M9 152 aa13.42□□□□□ -0.26
SHCBP1-201ENST00000303383 REV1Q9UBZ9 1251 aa13.42□□□□□ -0.26
SHCBP1-201ENST00000303383 USP34Q70CQ2 3546 aa13.41□□□□□ -0.26
SHCBP1-201ENST00000303383 C2orf92A0A1B0GVN3 265 aa13.41□□□□□ -0.26
SHCBP1-201ENST00000303383 PRKNO60260 465 aaPredicted RBP13.41□□□□□ -0.26
SHCBP1-201ENST00000303383 CSTAP01040 98 aa13.41□□□□□ -0.26
SHCBP1-201ENST00000303383 COPZ1P61923 177 aa13.41□□□□□ -0.26
SHCBP1-201ENST00000303383 SLC35A2P78381 396 aa13.41□□□□□ -0.26
SHCBP1-201ENST00000303383 LSM11P83369 360 aaKnown RBP eCLIP13.41□□□□□ -0.26
SHCBP1-201ENST00000303383 GINS1Q14691 196 aa13.41□□□□□ -0.26
SHCBP1-201ENST00000303383 CCDC157Q569K6 752 aa13.41□□□□□ -0.26
SHCBP1-201ENST00000303383 ZNF527Q8NB42 609 aa13.41□□□□□ -0.26
SHCBP1-201ENST00000303383 FUZQ9BT04 418 aa13.41□□□□□ -0.26
SHCBP1-201ENST00000303383 PRRG3Q9BZD7 231 aa13.41□□□□□ -0.26
SHCBP1-201ENST00000303383 POLR2J2Q9GZM3 115 aaKnown RBP13.41□□□□□ -0.26
SHCBP1-201ENST00000303383 PAK1IP1Q9NWT1 392 aaPredicted RBP13.41□□□□□ -0.26
SHCBP1-201ENST00000303383 TNRC6BQ9UPQ9 1833 aaKnown RBP13.41□□□□□ -0.26
SHCBP1-201ENST00000303383 IGKV1D-16P01601 117 aa13.41□□□□□ -0.26
SHCBP1-201ENST00000303383 GPR4P46093 362 aa13.41□□□□□ -0.26
SHCBP1-201ENST00000303383 ZNF136P52737 540 aa13.41□□□□□ -0.26
SHCBP1-201ENST00000303383 SMSP52788 366 aa13.41□□□□□ -0.26
SHCBP1-201ENST00000303383 RHAGQ02094 409 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms