RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 ADNPQ9H2P0 1102 aa5.41□□□□□ -1.54
SSX3-201ENST00000298396 PIGUQ9H490 435 aa5.41□□□□□ -1.54
SSX3-201ENST00000298396 RMND5AQ9H871 391 aa5.41□□□□□ -1.54
SSX3-201ENST00000298396 DUSP22Q9NRW4 184 aa5.41□□□□□ -1.54
SSX3-201ENST00000298396 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.41□□□□□ -1.54
SSX3-201ENST00000298396 CMTM6Q9NX76 183 aa5.41□□□□□ -1.54
SSX3-201ENST00000298396 GIN1Q9NXP7 522 aa5.41□□□□□ -1.54
SSX3-201ENST00000298396 STMN3Q9NZ72 180 aa5.41□□□□□ -1.54
SSX3-201ENST00000298396 KCNE5Q9UJ90 142 aa5.41□□□□□ -1.54
SSX3-201ENST00000298396 TUBD1Q9UJT1 453 aa5.41□□□□□ -1.54
SSX3-201ENST00000298396 CNOT11Q9UKZ1 510 aaKnown RBP5.41□□□□□ -1.54
SSX3-201ENST00000298396 CBLCQ9ULV8 474 aa5.41□□□□□ -1.54
SSX3-201ENST00000298396 VPS4AQ9UN37 437 aa5.41□□□□□ -1.54
SSX3-201ENST00000298396 YARS2Q9Y2Z4 477 aaKnown RBP5.41□□□□□ -1.54
SSX3-201ENST00000298396 NDUFAF1Q9Y375 327 aa5.41□□□□□ -1.54
SSX3-201ENST00000298396 NPFFR2Q9Y5X5 522 aa5.41□□□□□ -1.54
SSX3-201ENST00000298396 FLNCQ14315 2725 aa5.41□□□□□ -1.54
SSX3-201ENST00000298396 FREM1Q5H8C1 2179 aa5.4□□□□□ -1.54
SSX3-201ENST00000298396 CACNA1CQ13936 2221 aa5.4□□□□□ -1.54
SSX3-201ENST00000298396 SPTBN1Q01082 2364 aaKnown RBP5.4□□□□□ -1.54
SSX3-201ENST00000298396 OR5H15A6NDH6 313 aa5.4□□□□□ -1.54
SSX3-201ENST00000298396 BBIP1A8MTZ0 92 aa5.4□□□□□ -1.54
SSX3-201ENST00000298396 NPIPB9F8W1W9 429 aa5.4□□□□□ -1.54
SSX3-201ENST00000298396 G3V3Y1 287 aa5.4□□□□□ -1.54
SSX3-201ENST00000298396 NME4O00746 187 aa5.4□□□□□ -1.54
SSX3-201ENST00000298396 ANGPT2O15123 496 aa5.4□□□□□ -1.54
SSX3-201ENST00000298396 FADS1O60427 444 aa5.4□□□□□ -1.54
SSX3-201ENST00000298396 FCMRO60667 390 aa5.4□□□□□ -1.54
SSX3-201ENST00000298396 ICOSLGO75144 302 aa5.4□□□□□ -1.54
SSX3-201ENST00000298396 BCAS1O75363 584 aaPredicted RBP5.4□□□□□ -1.54
SSX3-201ENST00000298396 GCM2O75603 506 aaPredicted RBP5.4□□□□□ -1.54
SSX3-201ENST00000298396 DCTN3O75935 186 aa5.4□□□□□ -1.54
SSX3-201ENST00000298396 C1QL1O75973 258 aa5.4□□□□□ -1.54
SSX3-201ENST00000298396 KCNH1O95259 989 aa5.4□□□□□ -1.54
SSX3-201ENST00000298396 IL33O95760 270 aa5.4□□□□□ -1.54
SSX3-201ENST00000298396 ALOX5P09917 674 aa5.4□□□□□ -1.54
SSX3-201ENST00000298396 CYP4B1P13584 511 aa5.4□□□□□ -1.54
SSX3-201ENST00000298396 GPX2P18283 190 aa5.4□□□□□ -1.54
SSX3-201ENST00000298396 MATN1P21941 496 aa5.4□□□□□ -1.54
SSX3-201ENST00000298396 SLC6A2P23975 617 aa5.4□□□□□ -1.54
SSX3-201ENST00000298396 DNAJA1P31689 397 aaKnown RBP5.4□□□□□ -1.54
SSX3-201ENST00000298396 CHI3L1P36222 383 aaPredicted RBP5.4□□□□□ -1.54
SSX3-201ENST00000298396 CPOXP36551 454 aa5.4□□□□□ -1.54
SSX3-201ENST00000298396 PRIM2P49643 509 aa5.4□□□□□ -1.54
SSX3-201ENST00000298396 DCAF7P61962 342 aa5.4□□□□□ -1.54
SSX3-201ENST00000298396 AP2B1P63010 937 aa5.4□□□□□ -1.54
SSX3-201ENST00000298396 PMP22Q01453 160 aa5.4□□□□□ -1.54
SSX3-201ENST00000298396 LRRC74AQ0VAA2 488 aa5.4□□□□□ -1.54
SSX3-201ENST00000298396 PLCXD2Q0VAA5 305 aa5.4□□□□□ -1.54
SSX3-201ENST00000298396 NFYCQ13952 458 aa5.4□□□□□ -1.54
SSX3-201ENST00000298396 KRT72Q14CN4 511 aa5.4□□□□□ -1.54
SSX3-201ENST00000298396 RGNQ15493 299 aa5.4□□□□□ -1.54
SSX3-201ENST00000298396 SYPL1Q16563 259 aa5.4□□□□□ -1.54
SSX3-201ENST00000298396 NKPD1Q17RQ9 610 aa5.4□□□□□ -1.54
SSX3-201ENST00000298396 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.4□□□□□ -1.54
SSX3-201ENST00000298396 GRAMD1BQ3KR37 738 aa5.4□□□□□ -1.54
SSX3-201ENST00000298396 PRR30Q53SZ7 412 aaPredicted RBP5.4□□□□□ -1.54
SSX3-201ENST00000298396 DCST2Q5T1A1 773 aa5.4□□□□□ -1.54
SSX3-201ENST00000298396 SFRP5Q5T4F7 317 aa5.4□□□□□ -1.54
SSX3-201ENST00000298396 XP32Q5T750 250 aa5.4□□□□□ -1.54
SSX3-201ENST00000298396 ABHD17BQ5VST6 288 aa5.4□□□□□ -1.54
SSX3-201ENST00000298396 FNDC7Q5VTL7 733 aa5.4□□□□□ -1.54
SSX3-201ENST00000298396 HLA-DQA1Q5Y7H0 255 aa5.4□□□□□ -1.54
SSX3-201ENST00000298396 AP1ARQ63HQ0 302 aa5.4□□□□□ -1.54
SSX3-201ENST00000298396 NANOGP8Q6NSW7 305 aa5.4□□□□□ -1.54
SSX3-201ENST00000298396 ZCCHC12Q6PEW1 402 aa5.4□□□□□ -1.54
SSX3-201ENST00000298396 FRRS1Q6ZNA5 592 aa5.4□□□□□ -1.54
SSX3-201ENST00000298396 ASB18Q6ZVZ8 466 aa5.4□□□□□ -1.54
SSX3-201ENST00000298396 NET1Q7Z628 596 aaPredicted RBP5.4□□□□□ -1.54
SSX3-201ENST00000298396 HMGN2P46Q86SG4 172 aa5.4□□□□□ -1.54
SSX3-201ENST00000298396 CDH24Q86UP0 819 aa5.4□□□□□ -1.54
SSX3-201ENST00000298396 CALHM3Q86XJ0 350 aa5.4□□□□□ -1.54
SSX3-201ENST00000298396 WFDC3Q8IUB2 231 aa5.4□□□□□ -1.54
SSX3-201ENST00000298396 CYP4Z2PQ8N1L4 340 aa5.4□□□□□ -1.54
SSX3-201ENST00000298396 SLC15A4Q8N697 577 aa5.4□□□□□ -1.54
SSX3-201ENST00000298396 ANKFN1Q8N957 763 aa5.4□□□□□ -1.54
SSX3-201ENST00000298396 PSD4Q8NDX1 1056 aa5.4□□□□□ -1.54
SSX3-201ENST00000298396 OR52N2Q8NGI0 321 aa5.4□□□□□ -1.54
SSX3-201ENST00000298396 OR5M3Q8NGP4 307 aa5.4□□□□□ -1.54
SSX3-201ENST00000298396 SLC22A8Q8TCC7 542 aa5.4□□□□□ -1.54
SSX3-201ENST00000298396 SPPL2AQ8TCT8 520 aa5.4□□□□□ -1.54
SSX3-201ENST00000298396 GPR151Q8TDV0 419 aa5.4□□□□□ -1.54
SSX3-201ENST00000298396 GRHL3Q8TE85 626 aa5.4□□□□□ -1.54
SSX3-201ENST00000298396 PAQR8Q8TEZ7 354 aa5.4□□□□□ -1.54
SSX3-201ENST00000298396 ASB15Q8WXK1 588 aa5.4□□□□□ -1.54
SSX3-201ENST00000298396 JADE3Q92613 823 aa5.4□□□□□ -1.54
SSX3-201ENST00000298396 DIO2Q92813 273 aa5.4□□□□□ -1.54
SSX3-201ENST00000298396 MAL2Q969L2 176 aa5.4□□□□□ -1.54
SSX3-201ENST00000298396 MOAP1Q96BY2 351 aa5.4□□□□□ -1.54
SSX3-201ENST00000298396 LRRC58Q96CX6 371 aa5.4□□□□□ -1.54
SSX3-201ENST00000298396 ZG16BQ96DA0 208 aa5.4□□□□□ -1.54
SSX3-201ENST00000298396 WBP1Q96G27 269 aa5.4□□□□□ -1.54
SSX3-201ENST00000298396 Q96M66 194 aa5.4□□□□□ -1.54
SSX3-201ENST00000298396 LRRC37BQ96QE4 947 aa5.4□□□□□ -1.54
SSX3-201ENST00000298396 ADOQ96SZ5 270 aa5.4□□□□□ -1.54
SSX3-201ENST00000298396 SDF2Q99470 211 aa5.4□□□□□ -1.54
SSX3-201ENST00000298396 BTBD2Q9BX70 525 aa5.4□□□□□ -1.54
SSX3-201ENST00000298396 ZNF350Q9GZX5 532 aa5.4□□□□□ -1.54
SSX3-201ENST00000298396 SLC38A1Q9H2H9 487 aa5.4□□□□□ -1.54
SSX3-201ENST00000298396 KAT8Q9H7Z6 458 aaKnown RBP5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms