RNA–Protein interactions for RNA: ENST00000295550.8

COL6A3-201, Transcript of collagen type VI alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A3, Length 10,749 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-201ENST00000295550 Q6ZVU0 165 aa9.34□□□□□ -0.91
COL6A3-201ENST00000295550 IQCF1Q8N6M8 205 aa9.34□□□□□ -0.91
COL6A3-201ENST00000295550 OR51E2Q9H255 320 aa9.34□□□□□ -0.91
COL6A3-201ENST00000295550 LRRC37AA6NMS7 1700 aa9.34□□□□□ -0.91
COL6A3-201ENST00000295550 RPS10-NUDT3A0A1W2PQS6 291 aa9.34□□□□□ -0.91
COL6A3-201ENST00000295550 SYNGR4O95473 234 aa9.34□□□□□ -0.91
COL6A3-201ENST00000295550 RPS10P46783 165 aaKnown RBP9.34□□□□□ -0.91
COL6A3-201ENST00000295550 ECH1Q13011 328 aa9.34□□□□□ -0.91
COL6A3-201ENST00000295550 ZNF679Q8IYX0 411 aa9.34□□□□□ -0.91
COL6A3-201ENST00000295550 TEX26Q8N6G2 289 aa9.34□□□□□ -0.91
COL6A3-201ENST00000295550 OR4K1Q8NGD4 311 aa9.34□□□□□ -0.91
COL6A3-201ENST00000295550 SFXN5Q8TD22 340 aa9.34□□□□□ -0.91
COL6A3-201ENST00000295550 INSL5Q9Y5Q6 135 aa9.34□□□□□ -0.91
COL6A3-201ENST00000295550 ARID2Q68CP9 1835 aa9.34□□□□□ -0.91
COL6A3-201ENST00000295550 ACOT7O00154 380 aa9.34□□□□□ -0.91
COL6A3-201ENST00000295550 FXYD4P59646 89 aa9.34□□□□□ -0.91
COL6A3-201ENST00000295550 NRROSQ86YC3 692 aa9.34□□□□□ -0.91
COL6A3-201ENST00000295550 ACBD7Q8N6N7 88 aa9.34□□□□□ -0.91
COL6A3-201ENST00000295550 OR51A7Q8NH64 312 aa9.34□□□□□ -0.91
COL6A3-201ENST00000295550 LMF1Q96S06 567 aa9.34□□□□□ -0.91
COL6A3-201ENST00000295550 PINK1Q9BXM7 581 aa9.34□□□□□ -0.91
COL6A3-201ENST00000295550 COPS3Q9UNS2 423 aa9.34□□□□□ -0.91
COL6A3-201ENST00000295550 PCDHGA6Q9Y5G7 932 aa9.34□□□□□ -0.91
COL6A3-201ENST00000295550 SCN4AP35499 1836 aa9.34□□□□□ -0.91
COL6A3-201ENST00000295550 WASH4PA8MWX3 477 aa9.34□□□□□ -0.91
COL6A3-201ENST00000295550 PRAF2O60831 178 aa9.34□□□□□ -0.91
COL6A3-201ENST00000295550 RDH16O75452 317 aa9.34□□□□□ -0.91
COL6A3-201ENST00000295550 FABP6P51161 128 aa9.34□□□□□ -0.91
COL6A3-201ENST00000295550 UBE2KP61086 200 aa9.34□□□□□ -0.91
COL6A3-201ENST00000295550 PGM2L1Q6PCE3 622 aa9.34□□□□□ -0.91
COL6A3-201ENST00000295550 IGFN1Q86VF2 1251 aa9.34□□□□□ -0.91
COL6A3-201ENST00000295550 TSPYL5Q86VY4 417 aaPredicted RBP9.34□□□□□ -0.91
COL6A3-201ENST00000295550 KREMEN2Q8NCW0 462 aa9.34□□□□□ -0.91
COL6A3-201ENST00000295550 HRH4Q9H3N8 390 aa9.34□□□□□ -0.91
COL6A3-201ENST00000295550 ABRACLQ9P1F3 81 aa9.34□□□□□ -0.91
COL6A3-201ENST00000295550 PIP5K1CO60331 668 aa9.33□□□□□ -0.92
COL6A3-201ENST00000295550 RBMS1P29558 406 aaKnown RBP9.33□□□□□ -0.92
COL6A3-201ENST00000295550 SLC11A1P49279 550 aa9.33□□□□□ -0.92
COL6A3-201ENST00000295550 ADGRG5Q8IZF4 528 aa9.33□□□□□ -0.92
COL6A3-201ENST00000295550 ADAMTS19Q8TE59 1207 aa9.33□□□□□ -0.92
COL6A3-201ENST00000295550 SMAP2Q8WU79 429 aaPredicted RBP9.33□□□□□ -0.92
COL6A3-201ENST00000295550 PSD2Q9BQI7 771 aa9.33□□□□□ -0.92
COL6A3-201ENST00000295550 GLTPQ9NZD2 209 aa9.33□□□□□ -0.92
COL6A3-201ENST00000295550 USP3Q9Y6I4 520 aa9.33□□□□□ -0.92
COL6A3-201ENST00000295550 MYLKQ15746 1914 aa9.33□□□□□ -0.92
COL6A3-201ENST00000295550 PHYHO14832 338 aa9.33□□□□□ -0.92
COL6A3-201ENST00000295550 CA12O43570 354 aa9.33□□□□□ -0.92
COL6A3-201ENST00000295550 MMP20O60882 483 aa9.33□□□□□ -0.92
COL6A3-201ENST00000295550 CD9P21926 228 aa9.33□□□□□ -0.92
COL6A3-201ENST00000295550 GPR155Q7Z3F1 870 aa9.33□□□□□ -0.92
COL6A3-201ENST00000295550 SGPP2Q8IWX5 399 aa9.33□□□□□ -0.92
COL6A3-201ENST00000295550 ALG8Q9BVK2 526 aa9.33□□□□□ -0.92
COL6A3-201ENST00000295550 B3GNT3Q9Y2A9 372 aa9.33□□□□□ -0.92
COL6A3-201ENST00000295550 TP53TG5Q9Y2B4 290 aa9.33□□□□□ -0.92
COL6A3-201ENST00000295550 MT-ND4P03905 459 aa9.33□□□□□ -0.92
COL6A3-201ENST00000295550 GIFP27352 417 aa9.33□□□□□ -0.92
COL6A3-201ENST00000295550 ADRA1AP35348 466 aa9.33□□□□□ -0.92
COL6A3-201ENST00000295550 ERVK-16P61578 105 aa9.33□□□□□ -0.92
COL6A3-201ENST00000295550 RELAQ04206 551 aa9.33□□□□□ -0.92
COL6A3-201ENST00000295550 ZNF695Q8IW36 515 aa9.33□□□□□ -0.92
COL6A3-201ENST00000295550 CD200R1Q8TD46 325 aa9.33□□□□□ -0.92
COL6A3-201ENST00000295550 TMEM40Q8WWA1 233 aa9.33□□□□□ -0.92
COL6A3-201ENST00000295550 SNX18Q96RF0 628 aa9.33□□□□□ -0.92
COL6A3-201ENST00000295550 SLC29A1Q99808 456 aa9.33□□□□□ -0.92
COL6A3-201ENST00000295550 TGIF2Q9GZN2 237 aa9.33□□□□□ -0.92
COL6A3-201ENST00000295550 TXNL4BQ9NX01 149 aaKnown RBP9.33□□□□□ -0.92
COL6A3-201ENST00000295550 GPRC5BQ9NZH0 403 aa9.33□□□□□ -0.92
COL6A3-201ENST00000295550 HLA-AP01891 365 aaKnown RBP9.33□□□□□ -0.92
COL6A3-201ENST00000295550 ADH5P11766 374 aa9.33□□□□□ -0.92
COL6A3-201ENST00000295550 TRIM23P36406 574 aa9.33□□□□□ -0.92
COL6A3-201ENST00000295550 TATDN3Q17R31 274 aa9.33□□□□□ -0.92
COL6A3-201ENST00000295550 TRAM1L1Q8N609 369 aa9.33□□□□□ -0.92
COL6A3-201ENST00000295550 DEFB118Q96PH6 123 aa9.33□□□□□ -0.92
COL6A3-201ENST00000295550 FANCMQ8IYD8 2048 aa9.33□□□□□ -0.92
COL6A3-201ENST00000295550 UGDHO60701 494 aa9.33□□□□□ -0.92
COL6A3-201ENST00000295550 ETFAP13804 333 aa9.33□□□□□ -0.92
COL6A3-201ENST00000295550 BPIP17213 487 aa9.33□□□□□ -0.92
COL6A3-201ENST00000295550 KEAP1Q14145 624 aa9.33□□□□□ -0.92
COL6A3-201ENST00000295550 PROX2Q3B8N5 592 aa9.33□□□□□ -0.92
COL6A3-201ENST00000295550 KCTD11Q693B1 232 aa9.33□□□□□ -0.92
COL6A3-201ENST00000295550 ALKAL1Q6UXT8 129 aa9.33□□□□□ -0.92
COL6A3-201ENST00000295550 ZNF705AQ6ZN79 300 aaPredicted RBP9.33□□□□□ -0.92
COL6A3-201ENST00000295550 CYB5D2Q8WUJ1 264 aa9.33□□□□□ -0.92
COL6A3-201ENST00000295550 SPIN2AQ99865 258 aa9.33□□□□□ -0.92
COL6A3-201ENST00000295550 PRRT1Q99946 306 aa9.33□□□□□ -0.92
COL6A3-201ENST00000295550 SPIN2BQ9BPZ2 258 aa9.33□□□□□ -0.92
COL6A3-201ENST00000295550 THSD7AQ9UPZ6 1657 aa9.33□□□□□ -0.92
COL6A3-201ENST00000295550 ZNF791Q3KP31 576 aaPredicted RBP9.33□□□□□ -0.92
COL6A3-201ENST00000295550 PGAP1Q75T13 922 aa9.33□□□□□ -0.92
COL6A3-201ENST00000295550 TMEM150AQ86TG1 271 aa9.33□□□□□ -0.92
COL6A3-201ENST00000295550 OR8J1Q8NGP2 316 aa9.33□□□□□ -0.92
COL6A3-201ENST00000295550 IL21RQ9HBE5 538 aa9.33□□□□□ -0.92
COL6A3-201ENST00000295550 PPP1R14DQ9NXH3 145 aa9.33□□□□□ -0.92
COL6A3-201ENST00000295550 COL11A1P12107 1806 aaPredicted RBP9.33□□□□□ -0.92
COL6A3-201ENST00000295550 TMEM88BA6NKF7 163 aa9.33□□□□□ -0.92
COL6A3-201ENST00000295550 AOC2O75106 756 aa9.33□□□□□ -0.92
COL6A3-201ENST00000295550 CDC123O75794 336 aaPredicted RBP9.33□□□□□ -0.92
COL6A3-201ENST00000295550 STK17BO94768 372 aa9.33□□□□□ -0.92
COL6A3-201ENST00000295550 FHP07954 510 aa9.33□□□□□ -0.92
COL6A3-201ENST00000295550 M6PRP20645 277 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms