RNA–Protein interactions for RNA: ENST00000294172.6

NXF1-201, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-201ENST00000294172 PROKR2Q8NFJ6 384 aa13□□□□□ -0.33
NXF1-201ENST00000294172 OR4Q3Q8NH05 313 aa13□□□□□ -0.33
NXF1-201ENST00000294172 FGF11Q92914 225 aa13□□□□□ -0.33
NXF1-201ENST00000294172 RIT1Q92963 219 aa13□□□□□ -0.33
NXF1-201ENST00000294172 TCTN2Q96GX1 697 aa13□□□□□ -0.33
NXF1-201ENST00000294172 RBM18Q96H35 190 aaKnown RBP13□□□□□ -0.33
NXF1-201ENST00000294172 TAPBPLQ9BX59 468 aa13□□□□□ -0.33
NXF1-201ENST00000294172 MMP27Q9H306 513 aa13□□□□□ -0.33
NXF1-201ENST00000294172 TESQ9UGI8 421 aaKnown RBP13□□□□□ -0.33
NXF1-201ENST00000294172 TRAPPC13A5PLN9 417 aa12.99□□□□□ -0.33
NXF1-201ENST00000294172 SYNDIG1LA6NDD5 238 aa12.99□□□□□ -0.33
NXF1-201ENST00000294172 SNTNA6NMZ2 147 aa12.99□□□□□ -0.33
NXF1-201ENST00000294172 PRODHO43272 600 aa12.99□□□□□ -0.33
NXF1-201ENST00000294172 BRINP1O60477 761 aa12.99□□□□□ -0.33
NXF1-201ENST00000294172 SRPX2O60687 465 aaPredicted RBP12.99□□□□□ -0.33
NXF1-201ENST00000294172 RNH1P13489 461 aaKnown RBP12.99□□□□□ -0.33
NXF1-201ENST00000294172 MYL12AP19105 171 aa12.99□□□□□ -0.33
NXF1-201ENST00000294172 FUT1P19526 365 aa12.99□□□□□ -0.33
NXF1-201ENST00000294172 RPS4Y1P22090 263 aaKnown RBP12.99□□□□□ -0.33
NXF1-201ENST00000294172 SSTR4P31391 388 aa12.99□□□□□ -0.33
NXF1-201ENST00000294172 BCAP31P51572 246 aa12.99□□□□□ -0.33
NXF1-201ENST00000294172 RPL6Q02878 288 aaKnown RBP12.99□□□□□ -0.33
NXF1-201ENST00000294172 C19orf48Q6RUI8 117 aa12.99□□□□□ -0.33
NXF1-201ENST00000294172 CYP4Z2PQ8N1L4 340 aa12.99□□□□□ -0.33
NXF1-201ENST00000294172 FAM174AQ8TBP5 190 aa12.99□□□□□ -0.33
NXF1-201ENST00000294172 OTULINQ96BN8 352 aa12.99□□□□□ -0.33
NXF1-201ENST00000294172 DACH2Q96NX9 599 aa12.99□□□□□ -0.33
NXF1-201ENST00000294172 CNPPD1Q9BV87 410 aa12.99□□□□□ -0.33
NXF1-201ENST00000294172 TEX12Q9BXU0 123 aa12.99□□□□□ -0.33
NXF1-201ENST00000294172 PRRG3Q9BZD7 231 aa12.99□□□□□ -0.33
NXF1-201ENST00000294172 DIMT1Q9UNQ2 313 aaKnown RBP12.99□□□□□ -0.33
NXF1-201ENST00000294172 ABCA7Q8IZY2 2146 aa12.99□□□□□ -0.33
NXF1-201ENST00000294172 A0A1W2PR77 199 aa12.99□□□□□ -0.33
NXF1-201ENST00000294172 TGFBR3LH3BV60 316 aa12.99□□□□□ -0.33
NXF1-201ENST00000294172 KLF4O43474 513 aa12.99□□□□□ -0.33
NXF1-201ENST00000294172 FOXS1O43638 330 aa12.99□□□□□ -0.33
NXF1-201ENST00000294172 COQ9O75208 318 aa12.99□□□□□ -0.33
NXF1-201ENST00000294172 KCNK2O95069 426 aa12.99□□□□□ -0.33
NXF1-201ENST00000294172 AK1P00568 194 aa12.99□□□□□ -0.33
NXF1-201ENST00000294172 MAP3K8P41279 467 aa12.99□□□□□ -0.33
NXF1-201ENST00000294172 FASLGP48023 281 aa12.99□□□□□ -0.33
NXF1-201ENST00000294172 MTNR1AP48039 350 aa12.99□□□□□ -0.33
NXF1-201ENST00000294172 GFERP55789 205 aa12.99□□□□□ -0.33
NXF1-201ENST00000294172 BTG2P78543 158 aa12.99□□□□□ -0.33
NXF1-201ENST00000294172 KLHL22Q53GT1 634 aa12.99□□□□□ -0.33
NXF1-201ENST00000294172 LIPKQ5VXJ0 399 aa12.99□□□□□ -0.33
NXF1-201ENST00000294172 NIPAL1Q6NVV3 410 aa12.99□□□□□ -0.33
NXF1-201ENST00000294172 HSDL2Q6YN16 418 aa12.99□□□□□ -0.33
NXF1-201ENST00000294172 WDR88Q6ZMY6 472 aa12.99□□□□□ -0.33
NXF1-201ENST00000294172 ZNF620Q6ZNG0 422 aa12.99□□□□□ -0.33
NXF1-201ENST00000294172 OR4N2Q8NGD1 307 aa12.99□□□□□ -0.33
NXF1-201ENST00000294172 PFN4Q8NHR9 129 aa12.99□□□□□ -0.33
NXF1-201ENST00000294172 SAMD8Q96LT4 415 aa12.99□□□□□ -0.33
NXF1-201ENST00000294172 PRSS27Q9BQR3 290 aa12.99□□□□□ -0.33
NXF1-201ENST00000294172 CDADC1Q9BWV3 514 aa12.99□□□□□ -0.33
NXF1-201ENST00000294172 DPH1Q9BZG8 443 aa12.99□□□□□ -0.33
NXF1-201ENST00000294172 KRCC1Q9NPI7 259 aaPredicted RBP12.99□□□□□ -0.33
NXF1-201ENST00000294172 CHCHD3Q9NX63 227 aaKnown RBP12.99□□□□□ -0.33
NXF1-201ENST00000294172 IL20Q9NYY1 176 aa12.99□□□□□ -0.33
NXF1-201ENST00000294172 NKX2-2O95096 273 aa12.98□□□□□ -0.33
NXF1-201ENST00000294172 MLLT3P42568 568 aaPredicted RBP12.98□□□□□ -0.33
NXF1-201ENST00000294172 LIMK1P53667 647 aa12.98□□□□□ -0.33
NXF1-201ENST00000294172 FZD5Q13467 585 aa12.98□□□□□ -0.33
NXF1-201ENST00000294172 ZNHIT3Q15649 155 aaPredicted RBP12.98□□□□□ -0.33
NXF1-201ENST00000294172 PDZK1Q5T2W1 519 aa12.98□□□□□ -0.33
NXF1-201ENST00000294172 NKAIN2Q5VXU1 208 aa12.98□□□□□ -0.33
NXF1-201ENST00000294172 MRGPREQ86SM8 312 aa12.98□□□□□ -0.33
NXF1-201ENST00000294172 POGLUT1Q8NBL1 392 aa12.98□□□□□ -0.33
NXF1-201ENST00000294172 TOR1AIP2Q8NFQ8 470 aa12.98□□□□□ -0.33
NXF1-201ENST00000294172 GRHL3Q8TE85 626 aa12.98□□□□□ -0.33
NXF1-201ENST00000294172 MMABQ96EY8 250 aaPredicted RBP12.98□□□□□ -0.33
NXF1-201ENST00000294172 RERGLQ9H628 205 aa12.98□□□□□ -0.33
NXF1-201ENST00000294172 FOLH1BQ9HBA9 442 aa12.98□□□□□ -0.33
NXF1-201ENST00000294172 C20orf141Q9NUB4 165 aa12.98□□□□□ -0.33
NXF1-201ENST00000294172 MRPS33Q9Y291 106 aaKnown RBP12.98□□□□□ -0.33
NXF1-201ENST00000294172 SPAG17Q6Q759 2223 aa12.98□□□□□ -0.33
NXF1-201ENST00000294172 PNMA8CA0A1B0GUJ8 204 aa12.97□□□□□ -0.33
NXF1-201ENST00000294172 HYKKA2RU49 373 aa12.97□□□□□ -0.33
NXF1-201ENST00000294172 SURF4O15260 269 aa12.97□□□□□ -0.33
NXF1-201ENST00000294172 SLC2A10O95528 541 aa12.97□□□□□ -0.33
NXF1-201ENST00000294172 MAOAP21397 527 aa12.97□□□□□ -0.33
NXF1-201ENST00000294172 S1PR1P21453 382 aa12.97□□□□□ -0.33
NXF1-201ENST00000294172 PSMA1P25786 263 aaKnown RBP12.97□□□□□ -0.33
NXF1-201ENST00000294172 PGDP52209 483 aa12.97□□□□□ -0.33
NXF1-201ENST00000294172 SKP1P63208 163 aa12.97□□□□□ -0.33
NXF1-201ENST00000294172 RACK1P63244 317 aaKnown RBP12.97□□□□□ -0.33
NXF1-201ENST00000294172 PSG6Q00889 435 aa12.97□□□□□ -0.33
NXF1-201ENST00000294172 IFITM3Q01628 133 aa12.97□□□□□ -0.33
NXF1-201ENST00000294172 RAB40BQ12829 278 aa12.97□□□□□ -0.33
NXF1-201ENST00000294172 ZNF267Q14586 743 aaPredicted RBP12.97□□□□□ -0.33
NXF1-201ENST00000294172 NNATQ16517 81 aa12.97□□□□□ -0.33
NXF1-201ENST00000294172 LRIT3Q3SXY7 679 aa12.97□□□□□ -0.33
NXF1-201ENST00000294172 OR2G6Q5TZ20 316 aa12.97□□□□□ -0.33
NXF1-201ENST00000294172 OR2T33Q8NG76 320 aa12.97□□□□□ -0.33
NXF1-201ENST00000294172 TMEM239Q8WW34 195 aa12.97□□□□□ -0.33
NXF1-201ENST00000294172 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.97□□□□□ -0.33
NXF1-201ENST00000294172 ATP13A2Q9NQ11 1180 aa12.97□□□□□ -0.33
NXF1-201ENST00000294172 PRTFDC1Q9NRG1 225 aa12.97□□□□□ -0.33
NXF1-201ENST00000294172 CCDC59Q9P031 241 aaKnown RBP12.97□□□□□ -0.33
NXF1-201ENST00000294172 DTX4Q9Y2E6 619 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms