RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 TAP2Q03519 686 aa12.03□□□□□ -0.48
PTCD1-201ENST00000292478 RIN1Q13671 783 aa12.03□□□□□ -0.48
PTCD1-201ENST00000292478 DUS1LQ6P1R4 473 aaKnown RBP12.03□□□□□ -0.48
PTCD1-201ENST00000292478 NDNFQ8TB73 568 aa12.03□□□□□ -0.48
PTCD1-201ENST00000292478 MZB1Q8WU39 189 aa12.03□□□□□ -0.48
PTCD1-201ENST00000292478 TMIGD2Q96BF3 282 aa12.03□□□□□ -0.48
PTCD1-201ENST00000292478 BPIFA2Q96DR5 249 aa12.03□□□□□ -0.48
PTCD1-201ENST00000292478 ZNF587Q96SQ5 575 aaPredicted RBP12.03□□□□□ -0.48
PTCD1-201ENST00000292478 ZNF337Q9Y3M9 751 aa12.03□□□□□ -0.48
PTCD1-201ENST00000292478 NUBP2Q9Y5Y2 271 aa12.03□□□□□ -0.48
PTCD1-201ENST00000292478 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.03□□□□□ -0.48
PTCD1-201ENST00000292478 ATG12O94817 140 aa12.03□□□□□ -0.48
PTCD1-201ENST00000292478 F3P13726 295 aa12.03□□□□□ -0.48
PTCD1-201ENST00000292478 MLLT11Q13015 90 aaPredicted RBP12.03□□□□□ -0.48
PTCD1-201ENST00000292478 MELKQ14680 651 aa12.03□□□□□ -0.48
PTCD1-201ENST00000292478 SF3A2Q15428 464 aaKnown RBP12.03□□□□□ -0.48
PTCD1-201ENST00000292478 DEFB110Q30KQ9 67 aa12.03□□□□□ -0.48
PTCD1-201ENST00000292478 FAM69AQ5T7M9 428 aa12.03□□□□□ -0.48
PTCD1-201ENST00000292478 GSG1LQ6UXU4 331 aa12.03□□□□□ -0.48
PTCD1-201ENST00000292478 ADAMTSL4Q6UY14 1074 aa12.03□□□□□ -0.48
PTCD1-201ENST00000292478 TPSD1Q9BZJ3 242 aa12.03□□□□□ -0.48
PTCD1-201ENST00000292478 LMAN1LQ9HAT1 526 aa12.03□□□□□ -0.48
PTCD1-201ENST00000292478 DNMT3BQ9UBC3 853 aaKnown RBP12.03□□□□□ -0.48
PTCD1-201ENST00000292478 HIF3AQ9Y2N7 669 aa12.03□□□□□ -0.48
PTCD1-201ENST00000292478 MYH4Q9Y623 1939 aa12.03□□□□□ -0.48
PTCD1-201ENST00000292478 A8MVJ9 347 aa12.03□□□□□ -0.48
PTCD1-201ENST00000292478 F5H0A9 414 aaPredicted RBP12.03□□□□□ -0.48
PTCD1-201ENST00000292478 SRPX2O60687 465 aaPredicted RBP12.03□□□□□ -0.48
PTCD1-201ENST00000292478 ZNF16P17020 682 aaPredicted RBP12.03□□□□□ -0.48
PTCD1-201ENST00000292478 HTR2AP28223 471 aa12.03□□□□□ -0.48
PTCD1-201ENST00000292478 ARSKQ6UWY0 536 aa12.03□□□□□ -0.48
PTCD1-201ENST00000292478 IL22RA1Q8N6P7 574 aa12.03□□□□□ -0.48
PTCD1-201ENST00000292478 OR5D16Q8NGK9 328 aa12.03□□□□□ -0.48
PTCD1-201ENST00000292478 DOK4Q8TEW6 326 aa12.03□□□□□ -0.48
PTCD1-201ENST00000292478 C17orf50Q8WW18 174 aa12.03□□□□□ -0.48
PTCD1-201ENST00000292478 TRIM43Q96BQ3 446 aaPredicted RBP12.03□□□□□ -0.48
PTCD1-201ENST00000292478 ASIC5Q9NY37 505 aa12.03□□□□□ -0.48
PTCD1-201ENST00000292478 NAALAD2Q9Y3Q0 740 aa12.03□□□□□ -0.48
PTCD1-201ENST00000292478 RNF215Q9Y6U7 377 aa12.03□□□□□ -0.48
PTCD1-201ENST00000292478 A8MV72 311 aaPredicted RBP12.03□□□□□ -0.48
PTCD1-201ENST00000292478 SYT7O43581 403 aa12.03□□□□□ -0.48
PTCD1-201ENST00000292478 ZNF35P13682 527 aa12.03□□□□□ -0.48
PTCD1-201ENST00000292478 PRSS3P35030 304 aa12.03□□□□□ -0.48
PTCD1-201ENST00000292478 CA5AP35218 305 aa12.03□□□□□ -0.48
PTCD1-201ENST00000292478 COL28A1Q2UY09 1125 aa12.03□□□□□ -0.48
PTCD1-201ENST00000292478 GPR139Q6DWJ6 353 aa12.03□□□□□ -0.48
PTCD1-201ENST00000292478 PXKQ7Z7A4 578 aa12.03□□□□□ -0.48
PTCD1-201ENST00000292478 PLPP6Q8IY26 295 aa12.03□□□□□ -0.48
PTCD1-201ENST00000292478 TMEM246Q9BRR3 403 aa12.03□□□□□ -0.48
PTCD1-201ENST00000292478 SORBS1Q9BX66 1292 aaKnown RBP12.03□□□□□ -0.48
PTCD1-201ENST00000292478 HDAC8Q9BY41 377 aa12.03□□□□□ -0.48
PTCD1-201ENST00000292478 FN3KQ9H479 309 aa12.03□□□□□ -0.48
PTCD1-201ENST00000292478 CPNE7Q9UBL6 633 aa12.03□□□□□ -0.48
PTCD1-201ENST00000292478 IER3IP1Q9Y5U9 82 aa12.03□□□□□ -0.48
PTCD1-201ENST00000292478 NRAPQ86VF7 1730 aa12.03□□□□□ -0.48
PTCD1-201ENST00000292478 SGK494L7N484 410 aa12.03□□□□□ -0.48
PTCD1-201ENST00000292478 OR7A10O76100 309 aa12.03□□□□□ -0.48
PTCD1-201ENST00000292478 EGFP01133 1207 aa12.03□□□□□ -0.48
PTCD1-201ENST00000292478 SFTPBP07988 381 aa12.03□□□□□ -0.48
PTCD1-201ENST00000292478 S100A2P29034 98 aa12.03□□□□□ -0.48
PTCD1-201ENST00000292478 OPRL1P41146 370 aa12.03□□□□□ -0.48
PTCD1-201ENST00000292478 MAP4K2Q12851 820 aa12.03□□□□□ -0.48
PTCD1-201ENST00000292478 RPE65Q16518 533 aa12.03□□□□□ -0.48
PTCD1-201ENST00000292478 PGGHGQ32M88 737 aa12.03□□□□□ -0.48
PTCD1-201ENST00000292478 WBP2NLQ6ICG8 309 aa12.03□□□□□ -0.48
PTCD1-201ENST00000292478 PODNL1Q6PEZ8 512 aa12.03□□□□□ -0.48
PTCD1-201ENST00000292478 MEPCEQ7L2J0 689 aaKnown RBP12.03□□□□□ -0.48
PTCD1-201ENST00000292478 HORMAD2Q8N7B1 307 aa12.03□□□□□ -0.48
PTCD1-201ENST00000292478 SYT3Q9BQG1 590 aa12.03□□□□□ -0.48
PTCD1-201ENST00000292478 DUSP23Q9BVJ7 150 aa12.03□□□□□ -0.48
PTCD1-201ENST00000292478 C20orf27Q9GZN8 174 aa12.03□□□□□ -0.48
PTCD1-201ENST00000292478 MARCH5Q9NX47 278 aa12.03□□□□□ -0.48
PTCD1-201ENST00000292478 CIB4A0PJX0 185 aa12.02□□□□□ -0.48
PTCD1-201ENST00000292478 FCER2P06734 321 aa12.02□□□□□ -0.48
PTCD1-201ENST00000292478 CSF1P09603 554 aa12.02□□□□□ -0.48
PTCD1-201ENST00000292478 ACP2P11117 423 aa12.02□□□□□ -0.48
PTCD1-201ENST00000292478 ADH6P28332 368 aa12.02□□□□□ -0.48
PTCD1-201ENST00000292478 GALK2Q01415 458 aa12.02□□□□□ -0.48
PTCD1-201ENST00000292478 GLO1Q04760 184 aa12.02□□□□□ -0.48
PTCD1-201ENST00000292478 EIF2B1Q14232 305 aaKnown RBP12.02□□□□□ -0.48
PTCD1-201ENST00000292478 CCSAPQ6IQ19 270 aaPredicted RBP12.02□□□□□ -0.48
PTCD1-201ENST00000292478 DPY19L2P1Q6NXN4 242 aa12.02□□□□□ -0.48
PTCD1-201ENST00000292478 B3GNT8Q7Z7M8 397 aa12.02□□□□□ -0.48
PTCD1-201ENST00000292478 NAXEQ8NCW5 288 aa12.02□□□□□ -0.48
PTCD1-201ENST00000292478 OR52R1Q8NGF1 315 aa12.02□□□□□ -0.48
PTCD1-201ENST00000292478 MFSD8Q8NHS3 518 aa12.02□□□□□ -0.48
PTCD1-201ENST00000292478 UHRF1Q96T88 793 aaPredicted RBP12.02□□□□□ -0.48
PTCD1-201ENST00000292478 FBXL3Q9UKT7 428 aa12.02□□□□□ -0.48
PTCD1-201ENST00000292478 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.02□□□□□ -0.49
PTCD1-201ENST00000292478 ZNF850A8MQ14 1090 aa12.02□□□□□ -0.49
PTCD1-201ENST00000292478 ABLIM3O94929 683 aa12.02□□□□□ -0.49
PTCD1-201ENST00000292478 IFNA5P01569 189 aa12.02□□□□□ -0.49
PTCD1-201ENST00000292478 ALPLP05186 524 aa12.02□□□□□ -0.49
PTCD1-201ENST00000292478 CDK2P24941 298 aa12.02□□□□□ -0.49
PTCD1-201ENST00000292478 LBX1P52954 281 aa12.02□□□□□ -0.49
PTCD1-201ENST00000292478 CYCSP99999 105 aaKnown RBP12.02□□□□□ -0.49
PTCD1-201ENST00000292478 EMX1Q04741 257 aaPredicted RBP12.02□□□□□ -0.49
PTCD1-201ENST00000292478 RSU1Q15404 277 aa12.02□□□□□ -0.49
PTCD1-201ENST00000292478 CHPT1Q8WUD6 406 aa12.02□□□□□ -0.49
PTCD1-201ENST00000292478 SPRYD4Q8WW59 207 aaPredicted RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms