RNA–Protein interactions for RNA: ENST00000290894.12

SHF-201, Transcript of Src homology 2 domain containing F, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SHF, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-201ENST00000290894 BBS1Q8NFJ9 593 aa17.7■□□□□ 0.42
SHF-201ENST00000290894 FGF11Q92914 225 aa17.7■□□□□ 0.42
SHF-201ENST00000290894 RNFT2Q96EX2 444 aa17.7■□□□□ 0.42
SHF-201ENST00000290894 RBM18Q96H35 190 aaKnown RBP17.7■□□□□ 0.42
SHF-201ENST00000290894 PRSS27Q9BQR3 290 aa17.7■□□□□ 0.42
SHF-201ENST00000290894 CNPPD1Q9BV87 410 aa17.7■□□□□ 0.42
SHF-201ENST00000290894 CSNK1G3Q9Y6M4 447 aa17.7■□□□□ 0.42
SHF-201ENST00000290894 RP1P56715 2156 aa17.7■□□□□ 0.42
SHF-201ENST00000290894 TMEM131Q92545 1883 aa17.7■□□□□ 0.42
SHF-201ENST00000290894 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.69■□□□□ 0.42
SHF-201ENST00000290894 CDHR4A6H8M9 788 aa17.69■□□□□ 0.42
SHF-201ENST00000290894 FAM183AA6NL82 134 aa17.69■□□□□ 0.42
SHF-201ENST00000290894 METTL12A8MUP2 240 aa17.69■□□□□ 0.42
SHF-201ENST00000290894 MYL12BO14950 172 aa17.69■□□□□ 0.42
SHF-201ENST00000290894 OR5F1O95221 314 aa17.69■□□□□ 0.42
SHF-201ENST00000290894 DBIP07108 87 aaKnown RBP17.69■□□□□ 0.42
SHF-201ENST00000290894 PSG6Q00889 435 aa17.69■□□□□ 0.42
SHF-201ENST00000290894 NCF4Q15080 339 aa17.69■□□□□ 0.42
SHF-201ENST00000290894 OR1Q1Q15612 314 aa17.69■□□□□ 0.42
SHF-201ENST00000290894 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.69■□□□□ 0.42
SHF-201ENST00000290894 SMARCD3Q6STE5 483 aa17.69■□□□□ 0.42
SHF-201ENST00000290894 RASSF6Q6ZTQ3 369 aa17.69■□□□□ 0.42
SHF-201ENST00000290894 TMEM163Q8TC26 289 aa17.69■□□□□ 0.42
SHF-201ENST00000290894 RIT1Q92963 219 aa17.69■□□□□ 0.42
SHF-201ENST00000290894 MMABQ96EY8 250 aaPredicted RBP17.69■□□□□ 0.42
SHF-201ENST00000290894 TRMT61AQ96FX7 289 aaKnown RBP17.69■□□□□ 0.42
SHF-201ENST00000290894 COX4I2Q96KJ9 171 aa17.69■□□□□ 0.42
SHF-201ENST00000290894 SAMD8Q96LT4 415 aa17.69■□□□□ 0.42
SHF-201ENST00000290894 PTCHD1Q96NR3 888 aa17.69■□□□□ 0.42
SHF-201ENST00000290894 CDADC1Q9BWV3 514 aa17.69■□□□□ 0.42
SHF-201ENST00000290894 ENKD1Q9H0I2 346 aa17.69■□□□□ 0.42
SHF-201ENST00000290894 A0A1W2PR77 199 aa17.69■□□□□ 0.42
SHF-201ENST00000290894 CHURC1-FNTBB4DL54 471 aa17.69■□□□□ 0.42
SHF-201ENST00000290894 STK25O00506 426 aa17.69■□□□□ 0.42
SHF-201ENST00000290894 ADAM11O75078 769 aa17.69■□□□□ 0.42
SHF-201ENST00000290894 KCNK2O95069 426 aa17.69■□□□□ 0.42
SHF-201ENST00000290894 SLC35E2P0CK97 266 aa17.69■□□□□ 0.42
SHF-201ENST00000290894 MYF5P13349 255 aa17.69■□□□□ 0.42
SHF-201ENST00000290894 CD79BP40259 229 aa17.69■□□□□ 0.42
SHF-201ENST00000290894 ZNF267Q14586 743 aaPredicted RBP17.69■□□□□ 0.42
SHF-201ENST00000290894 FLYWCH1Q4VC44 716 aa17.69■□□□□ 0.42
SHF-201ENST00000290894 MEDAGQ5VYS4 303 aa17.69■□□□□ 0.42
SHF-201ENST00000290894 RANBP3LQ86VV4 465 aaPredicted RBP17.69■□□□□ 0.42
SHF-201ENST00000290894 ANKK1Q8NFD2 765 aa17.69■□□□□ 0.42
SHF-201ENST00000290894 CNOT9Q92600 299 aaKnown RBP17.69■□□□□ 0.42
SHF-201ENST00000290894 MSANTD3Q96H12 275 aa17.69■□□□□ 0.42
SHF-201ENST00000290894 TAPBPLQ9BX59 468 aa17.69■□□□□ 0.42
SHF-201ENST00000290894 FBXO8Q9NRD0 319 aa17.69■□□□□ 0.42
SHF-201ENST00000290894 TBCCD1Q9NVR7 557 aa17.69■□□□□ 0.42
SHF-201ENST00000290894 METTL15A6NJ78 407 aa17.68■□□□□ 0.42
SHF-201ENST00000290894 AGRPO00253 132 aa17.68■□□□□ 0.42
SHF-201ENST00000290894 BRINP1O60477 761 aa17.68■□□□□ 0.42
SHF-201ENST00000290894 IGKV1D-16P01601 117 aa17.68■□□□□ 0.42
SHF-201ENST00000290894 SCG5P05408 212 aa17.68■□□□□ 0.42
SHF-201ENST00000290894 RGS21Q2M5E4 152 aa17.68■□□□□ 0.42
SHF-201ENST00000290894 PRTGQ2VWP7 1150 aa17.68■□□□□ 0.42
SHF-201ENST00000290894 ZNF554Q86TJ5 538 aa17.68■□□□□ 0.42
SHF-201ENST00000290894 NANOGP1Q8N7R0 232 aa17.68■□□□□ 0.42
SHF-201ENST00000290894 POGLUT1Q8NBL1 392 aa17.68■□□□□ 0.42
SHF-201ENST00000290894 SPACA7Q96KW9 195 aa17.68■□□□□ 0.42
SHF-201ENST00000290894 SLC38A2Q96QD8 506 aa17.68■□□□□ 0.42
SHF-201ENST00000290894 MND1Q9BWT6 205 aa17.68■□□□□ 0.42
SHF-201ENST00000290894 WDR12Q9GZL7 423 aaKnown RBP17.68■□□□□ 0.42
SHF-201ENST00000290894 POLE4Q9NR33 117 aa17.68■□□□□ 0.42
SHF-201ENST00000290894 HYAL3O43820 417 aaPredicted RBP17.68■□□□□ 0.42
SHF-201ENST00000290894 THBS1P07996 1170 aa17.68■□□□□ 0.42
SHF-201ENST00000290894 OCM2P0CE71 109 aa17.68■□□□□ 0.42
SHF-201ENST00000290894 OCMP0CE72 109 aaPredicted RBP17.68■□□□□ 0.42
SHF-201ENST00000290894 S1PR1P21453 382 aa17.68■□□□□ 0.42
SHF-201ENST00000290894 FPR3P25089 353 aa17.68■□□□□ 0.42
SHF-201ENST00000290894 MLLT3P42568 568 aaPredicted RBP17.68■□□□□ 0.42
SHF-201ENST00000290894 TUBA1BP68363 451 aa17.68■□□□□ 0.42
SHF-201ENST00000290894 LRIT3Q3SXY7 679 aa17.68■□□□□ 0.42
SHF-201ENST00000290894 EIPR1Q53HC9 387 aa17.68■□□□□ 0.42
SHF-201ENST00000290894 SLC35F1Q5T1Q4 408 aa17.68■□□□□ 0.42
SHF-201ENST00000290894 ZNF620Q6ZNG0 422 aa17.68■□□□□ 0.42
SHF-201ENST00000290894 TUBA1AQ71U36 451 aa17.68■□□□□ 0.42
SHF-201ENST00000290894 RBM12BQ8IXT5 1001 aaKnown RBP17.68■□□□□ 0.42
SHF-201ENST00000290894 GATAD2BQ8WXI9 593 aa17.68■□□□□ 0.42
SHF-201ENST00000290894 NACC2Q96BF6 587 aa17.68■□□□□ 0.42
SHF-201ENST00000290894 STACQ99469 402 aa17.68■□□□□ 0.42
SHF-201ENST00000290894 SPRTNQ9H040 489 aaPredicted RBP17.68■□□□□ 0.42
SHF-201ENST00000290894 PALMDQ9NP74 551 aa17.68■□□□□ 0.42
SHF-201ENST00000290894 TESQ9UGI8 421 aaKnown RBP17.68■□□□□ 0.42
SHF-201ENST00000290894 HEATR5AQ86XA9 2040 aa17.67■□□□□ 0.42
SHF-201ENST00000290894 ARID1BQ8NFD5 2236 aaPredicted RBP17.67■□□□□ 0.42
SHF-201ENST00000290894 GNB5O14775 395 aa17.67■□□□□ 0.42
SHF-201ENST00000290894 SULT1C4O75897 302 aa17.67■□□□□ 0.42
SHF-201ENST00000290894 RNH1P13489 461 aaKnown RBP17.67■□□□□ 0.42
SHF-201ENST00000290894 IL9P15248 144 aa17.67■□□□□ 0.42
SHF-201ENST00000290894 MAKP20794 623 aa17.67■□□□□ 0.42
SHF-201ENST00000290894 RPS4Y1P22090 263 aaKnown RBP17.67■□□□□ 0.42
SHF-201ENST00000290894 MAP3K8P41279 467 aa17.67■□□□□ 0.42
SHF-201ENST00000290894 FASLGP48023 281 aa17.67■□□□□ 0.42
SHF-201ENST00000290894 MTNR1AP48039 350 aa17.67■□□□□ 0.42
SHF-201ENST00000290894 TGM4P49221 684 aa17.67■□□□□ 0.42
SHF-201ENST00000290894 SEPHS1P49903 392 aa17.67■□□□□ 0.42
SHF-201ENST00000290894 EMDP50402 254 aa17.67■□□□□ 0.42
SHF-201ENST00000290894 LIMK1P53667 647 aa17.67■□□□□ 0.42
SHF-201ENST00000290894 RHAGQ02094 409 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms