RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 MBTPS1Q14703 1052 aa17.41■□□□□ 0.38
PCDH1-201ENST00000287008 MICAQ29983 383 aa17.41■□□□□ 0.38
PCDH1-201ENST00000287008 PLEK2Q9NYT0 353 aa17.41■□□□□ 0.38
PCDH1-201ENST00000287008 GSKIPQ9P0R6 139 aa17.41■□□□□ 0.38
PCDH1-201ENST00000287008 KCND3Q9UK17 655 aa17.41■□□□□ 0.38
PCDH1-201ENST00000287008 IER3IP1Q9Y5U9 82 aa17.41■□□□□ 0.38
PCDH1-201ENST00000287008 PLCH1Q4KWH8 1693 aa17.41■□□□□ 0.38
PCDH1-201ENST00000287008 SRFP11831 508 aa17.41■□□□□ 0.38
PCDH1-201ENST00000287008 GCH1P30793 250 aa17.41■□□□□ 0.38
PCDH1-201ENST00000287008 CPOXP36551 454 aa17.41■□□□□ 0.38
PCDH1-201ENST00000287008 KCNJ10P78508 379 aa17.41■□□□□ 0.38
PCDH1-201ENST00000287008 KCTD9Q7L273 389 aa17.41■□□□□ 0.38
PCDH1-201ENST00000287008 OR9Q2Q8NGE9 314 aa17.41■□□□□ 0.38
PCDH1-201ENST00000287008 ADAMTS19Q8TE59 1207 aa17.41■□□□□ 0.38
PCDH1-201ENST00000287008 TRUB1Q8WWH5 349 aaKnown RBP17.41■□□□□ 0.38
PCDH1-201ENST00000287008 KHSRPQ92945 711 aaKnown RBP eCLIP17.41■□□□□ 0.38
PCDH1-201ENST00000287008 CITED4Q96RK1 184 aa17.41■□□□□ 0.38
PCDH1-201ENST00000287008 PAK1IP1Q9NWT1 392 aaPredicted RBP17.41■□□□□ 0.38
PCDH1-201ENST00000287008 GTF2F2P13984 249 aa17.41■□□□□ 0.38
PCDH1-201ENST00000287008 PIGFQ07326 219 aa17.41■□□□□ 0.38
PCDH1-201ENST00000287008 FAM205BPQ63HN1 556 aa17.41■□□□□ 0.38
PCDH1-201ENST00000287008 C22orf42Q6IC83 251 aa17.41■□□□□ 0.38
PCDH1-201ENST00000287008 IQCF1Q8N6M8 205 aa17.41■□□□□ 0.38
PCDH1-201ENST00000287008 CNEP1R1Q8N9A8 125 aa17.41■□□□□ 0.38
PCDH1-201ENST00000287008 SYT14Q8NB59 555 aa17.41■□□□□ 0.38
PCDH1-201ENST00000287008 ACOT11Q8WXI4 607 aaPredicted RBP17.41■□□□□ 0.38
PCDH1-201ENST00000287008 CD93Q9NPY3 652 aa17.41■□□□□ 0.38
PCDH1-201ENST00000287008 DHCR7Q9UBM7 475 aaKnown RBP17.41■□□□□ 0.38
PCDH1-201ENST00000287008 VNN2O95498 520 aa17.41■□□□□ 0.38
PCDH1-201ENST00000287008 WDR53Q7Z5U6 358 aaPredicted RBP17.41■□□□□ 0.38
PCDH1-201ENST00000287008 ADIPOR2Q86V24 386 aa17.41■□□□□ 0.38
PCDH1-201ENST00000287008 SNIP1Q8TAD8 396 aaKnown RBP17.41■□□□□ 0.38
PCDH1-201ENST00000287008 PRRC1Q96M27 445 aa17.41■□□□□ 0.38
PCDH1-201ENST00000287008 MYADMQ96S97 322 aa17.41■□□□□ 0.38
PCDH1-201ENST00000287008 LOC102723532A0A0G2JNH3 316 aa17.4■□□□□ 0.38
PCDH1-201ENST00000287008 SLITRK5O94991 958 aa17.4■□□□□ 0.38
PCDH1-201ENST00000287008 DIRAS3O95661 229 aa17.4■□□□□ 0.38
PCDH1-201ENST00000287008 APLNRP35414 380 aa17.4■□□□□ 0.38
PCDH1-201ENST00000287008 SNU13P55769 128 aaKnown RBP17.4■□□□□ 0.38
PCDH1-201ENST00000287008 ZNF791Q3KP31 576 aaPredicted RBP17.4■□□□□ 0.38
PCDH1-201ENST00000287008 OR5M10Q6IEU7 315 aa17.4■□□□□ 0.38
PCDH1-201ENST00000287008 SLC25A25Q6KCM7 469 aa17.4■□□□□ 0.38
PCDH1-201ENST00000287008 MRPL21Q7Z2W9 205 aaKnown RBP17.4■□□□□ 0.38
PCDH1-201ENST00000287008 ZFP41Q8N8Y5 198 aa17.4■□□□□ 0.38
PCDH1-201ENST00000287008 FER1L6-AS2Q96M78 137 aa17.4■□□□□ 0.38
PCDH1-201ENST00000287008 CCDC115Q96NT0 180 aa17.4■□□□□ 0.38
PCDH1-201ENST00000287008 CHRDQ9H2X0 955 aa17.4■□□□□ 0.38
PCDH1-201ENST00000287008 ICKQ9UPZ9 632 aa17.4■□□□□ 0.38
PCDH1-201ENST00000287008 FXYD6-FXYD2A0A087WZ82 144 aa17.4■□□□□ 0.38
PCDH1-201ENST00000287008 ZNF806P0C7X5 589 aa17.4■□□□□ 0.38
PCDH1-201ENST00000287008 HLCSP50747 726 aa17.4■□□□□ 0.38
PCDH1-201ENST00000287008 MAT1AQ00266 395 aaKnown RBP17.4■□□□□ 0.38
PCDH1-201ENST00000287008 PAPD4Q6PIY7 484 aaKnown RBP17.4■□□□□ 0.38
PCDH1-201ENST00000287008 MMP21Q8N119 569 aa17.4■□□□□ 0.38
PCDH1-201ENST00000287008 MFSD8Q8NHS3 518 aa17.4■□□□□ 0.38
PCDH1-201ENST00000287008 OR7D2Q96RA2 312 aa17.4■□□□□ 0.38
PCDH1-201ENST00000287008 HDHD5Q9BXW7 423 aa17.4■□□□□ 0.38
PCDH1-201ENST00000287008 ZNF700Q9H0M5 742 aa17.4■□□□□ 0.38
PCDH1-201ENST00000287008 FXYD6Q9H0Q3 95 aa17.4■□□□□ 0.38
PCDH1-201ENST00000287008 FGF22Q9HCT0 170 aa17.4■□□□□ 0.38
PCDH1-201ENST00000287008 INIPQ9NRY2 104 aa17.4■□□□□ 0.38
PCDH1-201ENST00000287008 ETAA1Q9NY74 926 aa17.4■□□□□ 0.38
PCDH1-201ENST00000287008 EMC3Q9P0I2 261 aa17.4■□□□□ 0.38
PCDH1-201ENST00000287008 LRRTM2O43300 516 aa17.4■□□□□ 0.38
PCDH1-201ENST00000287008 SYT7O43581 403 aa17.4■□□□□ 0.38
PCDH1-201ENST00000287008 ZP2Q05996 745 aa17.4■□□□□ 0.38
PCDH1-201ENST00000287008 MRPL58Q14197 206 aaKnown RBP17.4■□□□□ 0.38
PCDH1-201ENST00000287008 SLC5A12Q1EHB4 618 aa17.4■□□□□ 0.38
PCDH1-201ENST00000287008 C9orf50Q5SZB4 431 aa17.4■□□□□ 0.38
PCDH1-201ENST00000287008 C3P1Q6ZMU1 363 aa17.4■□□□□ 0.38
PCDH1-201ENST00000287008 RNF175Q8N4F7 328 aa17.4■□□□□ 0.38
PCDH1-201ENST00000287008 OR9K2Q8NGE7 335 aa17.4■□□□□ 0.38
PCDH1-201ENST00000287008 C3orf30Q96M34 536 aa17.4■□□□□ 0.38
PCDH1-201ENST00000287008 EMCNQ9ULC0 261 aa17.4■□□□□ 0.38
PCDH1-201ENST00000287008 NENFQ9UMX5 172 aa17.4■□□□□ 0.38
PCDH1-201ENST00000287008 C12orf71A8MTZ7 269 aa17.4■□□□□ 0.38
PCDH1-201ENST00000287008 F5H5K5 113 aa17.4■□□□□ 0.38
PCDH1-201ENST00000287008 GK3PQ14409 553 aa17.4■□□□□ 0.38
PCDH1-201ENST00000287008 ARL6IP1Q15041 203 aa17.4■□□□□ 0.38
PCDH1-201ENST00000287008 ZNF517Q6ZMY9 492 aaPredicted RBP17.4■□□□□ 0.38
PCDH1-201ENST00000287008 SLCO4C1Q6ZQN7 724 aa17.4■□□□□ 0.38
PCDH1-201ENST00000287008 LKAAEAR1Q8TD35 194 aa17.4■□□□□ 0.38
PCDH1-201ENST00000287008 BPIFA2Q96DR5 249 aa17.4■□□□□ 0.38
PCDH1-201ENST00000287008 UTP23Q9BRU9 249 aaKnown RBP17.4■□□□□ 0.38
PCDH1-201ENST00000287008 EVA1AQ9H8M9 152 aa17.4■□□□□ 0.38
PCDH1-201ENST00000287008 ZNF160Q9HCG1 818 aa17.4■□□□□ 0.38
PCDH1-201ENST00000287008 KCNIP1Q9NZI2 227 aa17.4■□□□□ 0.38
PCDH1-201ENST00000287008 CD8B2A6NJW9 211 aa17.39■□□□□ 0.37
PCDH1-201ENST00000287008 FAM171A2A8MVW0 826 aa17.39■□□□□ 0.37
PCDH1-201ENST00000287008 UCHL1P09936 223 aa17.39■□□□□ 0.37
PCDH1-201ENST00000287008 CD8BP10966 210 aa17.39■□□□□ 0.37
PCDH1-201ENST00000287008 FNTBP49356 437 aa17.39■□□□□ 0.37
PCDH1-201ENST00000287008 PPP1R35Q8TAP8 253 aa17.39■□□□□ 0.37
PCDH1-201ENST00000287008 FAM46BQ96A09 425 aa17.39■□□□□ 0.37
PCDH1-201ENST00000287008 RFT1Q96AA3 541 aa17.39■□□□□ 0.37
PCDH1-201ENST00000287008 DCAF13Q9NV06 445 aaKnown RBP17.39■□□□□ 0.37
PCDH1-201ENST00000287008 SMOXQ9NWM0 555 aa17.39■□□□□ 0.37
PCDH1-201ENST00000287008 PRDM4Q9UKN5 801 aa17.39■□□□□ 0.37
PCDH1-201ENST00000287008 E2F3O00716 465 aa17.39■□□□□ 0.37
PCDH1-201ENST00000287008 BMP2P12643 396 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms