RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 SLC7A7Q9UM01 511 aa12.35□□□□□ -0.43
SLC28A1-201ENST00000286749 OR1A2Q9Y585 309 aa12.35□□□□□ -0.43
SLC28A1-201ENST00000286749 HMGN1P05114 100 aa12.35□□□□□ -0.43
SLC28A1-201ENST00000286749 FUT1P19526 365 aa12.35□□□□□ -0.43
SLC28A1-201ENST00000286749 TBXA2RP21731 343 aa12.35□□□□□ -0.43
SLC28A1-201ENST00000286749 PAICSP22234 425 aaKnown RBP12.35□□□□□ -0.43
SLC28A1-201ENST00000286749 MPIP34949 423 aa12.35□□□□□ -0.43
SLC28A1-201ENST00000286749 TALDO1P37837 337 aa12.35□□□□□ -0.43
SLC28A1-201ENST00000286749 RAB28P51157 221 aa12.35□□□□□ -0.43
SLC28A1-201ENST00000286749 FCN2Q15485 313 aa12.35□□□□□ -0.43
SLC28A1-201ENST00000286749 PLA1AQ53H76 456 aa12.35□□□□□ -0.43
SLC28A1-201ENST00000286749 LRRC28Q86X40 367 aaPredicted RBP12.35□□□□□ -0.43
SLC28A1-201ENST00000286749 C9orf62Q8N4C0 152 aa12.35□□□□□ -0.43
SLC28A1-201ENST00000286749 ACBD7Q8N6N7 88 aa12.35□□□□□ -0.43
SLC28A1-201ENST00000286749 GANCQ8TET4 914 aa12.35□□□□□ -0.43
SLC28A1-201ENST00000286749 PHF21AQ96BD5 680 aa12.35□□□□□ -0.43
SLC28A1-201ENST00000286749 SLC35A4Q96G79 324 aa12.35□□□□□ -0.43
SLC28A1-201ENST00000286749 CAPNS2Q96L46 248 aa12.35□□□□□ -0.43
SLC28A1-201ENST00000286749 UBL7Q96S82 380 aaPredicted RBP12.35□□□□□ -0.43
SLC28A1-201ENST00000286749 TIMP4Q99727 224 aa12.35□□□□□ -0.43
SLC28A1-201ENST00000286749 JAM3Q9BX67 310 aa12.35□□□□□ -0.43
SLC28A1-201ENST00000286749 BABAM2Q9NXR7 383 aa12.35□□□□□ -0.43
SLC28A1-201ENST00000286749 CALML5Q9NZT1 146 aa12.35□□□□□ -0.43
SLC28A1-201ENST00000286749 PRKAG2Q9UGJ0 569 aa12.35□□□□□ -0.43
SLC28A1-201ENST00000286749 NCKAP1Q9Y2A7 1128 aa12.35□□□□□ -0.43
SLC28A1-201ENST00000286749 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.34□□□□□ -0.43
SLC28A1-201ENST00000286749 EEF1E1O43324 174 aaKnown RBP12.34□□□□□ -0.43
SLC28A1-201ENST00000286749 ZGLP1P0C6A0 271 aa12.34□□□□□ -0.43
SLC28A1-201ENST00000286749 GALP22466 123 aa12.34□□□□□ -0.43
SLC28A1-201ENST00000286749 ITGB8P26012 769 aa12.34□□□□□ -0.43
SLC28A1-201ENST00000286749 VIPR2P41587 438 aa12.34□□□□□ -0.43
SLC28A1-201ENST00000286749 RNF144AP50876 292 aaPredicted RBP12.34□□□□□ -0.43
SLC28A1-201ENST00000286749 OR10A3P58181 314 aa12.34□□□□□ -0.43
SLC28A1-201ENST00000286749 BICRALQ6AI39 1079 aa12.34□□□□□ -0.43
SLC28A1-201ENST00000286749 ETFBKMTQ8IXQ9 262 aa12.34□□□□□ -0.43
SLC28A1-201ENST00000286749 FAM109AQ8N4B1 249 aa12.34□□□□□ -0.43
SLC28A1-201ENST00000286749 OR2L5Q8NG80 312 aa12.34□□□□□ -0.43
SLC28A1-201ENST00000286749 GIMAP5Q96F15 307 aa12.34□□□□□ -0.43
SLC28A1-201ENST00000286749 HYLS1Q96M11 299 aa12.34□□□□□ -0.43
SLC28A1-201ENST00000286749 ACTRT3Q9BYD9 372 aa12.34□□□□□ -0.43
SLC28A1-201ENST00000286749 NLGN3Q9NZ94 848 aa12.34□□□□□ -0.43
SLC28A1-201ENST00000286749 TRAV6A0A075B6T7 132 aa12.34□□□□□ -0.43
SLC28A1-201ENST00000286749 OTOL1A6NHN0 477 aaPredicted RBP12.34□□□□□ -0.43
SLC28A1-201ENST00000286749 FABP7O15540 132 aa12.34□□□□□ -0.43
SLC28A1-201ENST00000286749 CHP2O43745 196 aa12.34□□□□□ -0.43
SLC28A1-201ENST00000286749 OR5F1O95221 314 aa12.34□□□□□ -0.43
SLC28A1-201ENST00000286749 CRYZL1O95825 349 aa12.34□□□□□ -0.43
SLC28A1-201ENST00000286749 EPCAMP16422 314 aa12.34□□□□□ -0.43
SLC28A1-201ENST00000286749 THBS2P35442 1172 aa12.34□□□□□ -0.43
SLC28A1-201ENST00000286749 VEGFBP49765 207 aa12.34□□□□□ -0.43
SLC28A1-201ENST00000286749 BTG1P62324 171 aa12.34□□□□□ -0.43
SLC28A1-201ENST00000286749 BDH1Q02338 343 aa12.34□□□□□ -0.43
SLC28A1-201ENST00000286749 AGERQ15109 404 aa12.34□□□□□ -0.43
SLC28A1-201ENST00000286749 ANKRD54Q6NXT1 300 aa12.34□□□□□ -0.43
SLC28A1-201ENST00000286749 NIPAL3Q6P499 406 aa12.34□□□□□ -0.43
SLC28A1-201ENST00000286749 FAM111BQ6SJ93 734 aa12.34□□□□□ -0.43
SLC28A1-201ENST00000286749 ARL9Q6T311 187 aa12.34□□□□□ -0.43
SLC28A1-201ENST00000286749 FRRS1Q6ZNA5 592 aa12.34□□□□□ -0.43
SLC28A1-201ENST00000286749 GID4Q8IVV7 300 aa12.34□□□□□ -0.43
SLC28A1-201ENST00000286749 GPR135Q8IZ08 494 aa12.34□□□□□ -0.43
SLC28A1-201ENST00000286749 FBXL6Q8N531 539 aa12.34□□□□□ -0.43
SLC28A1-201ENST00000286749 SLC16A11Q8NCK7 471 aa12.34□□□□□ -0.43
SLC28A1-201ENST00000286749 ADAMTS15Q8TE58 950 aa12.34□□□□□ -0.43
SLC28A1-201ENST00000286749 CDS1Q92903 461 aa12.34□□□□□ -0.43
SLC28A1-201ENST00000286749 TOX2Q96NM4 488 aa12.34□□□□□ -0.43
SLC28A1-201ENST00000286749 HCAR1Q9BXC0 346 aa12.34□□□□□ -0.43
SLC28A1-201ENST00000286749 DPH1Q9BZG8 443 aa12.34□□□□□ -0.43
SLC28A1-201ENST00000286749 MED28Q9H204 178 aa12.34□□□□□ -0.43
SLC28A1-201ENST00000286749 FOLH1BQ9HBA9 442 aa12.34□□□□□ -0.43
SLC28A1-201ENST00000286749 KCNK6Q9Y257 313 aa12.34□□□□□ -0.43
SLC28A1-201ENST00000286749 RASD1Q9Y272 281 aa12.34□□□□□ -0.43
SLC28A1-201ENST00000286749 ZNF443Q9Y2A4 671 aaPredicted RBP12.34□□□□□ -0.43
SLC28A1-201ENST00000286749 DAPL1A0PJW8 107 aa12.33□□□□□ -0.44
SLC28A1-201ENST00000286749 HK1P19367 917 aa12.33□□□□□ -0.44
SLC28A1-201ENST00000286749 BTCP35070 178 aa12.33□□□□□ -0.44
SLC28A1-201ENST00000286749 PUS10Q3MIT2 529 aaKnown RBP12.33□□□□□ -0.44
SLC28A1-201ENST00000286749 CDC73Q6P1J9 531 aa12.33□□□□□ -0.44
SLC28A1-201ENST00000286749 RFPL4BQ6ZWI9 263 aa12.33□□□□□ -0.44
SLC28A1-201ENST00000286749 MRPL43Q8N983 215 aaKnown RBP12.33□□□□□ -0.44
SLC28A1-201ENST00000286749 OR10H4Q8NGA5 316 aa12.33□□□□□ -0.44
SLC28A1-201ENST00000286749 ZNF681Q96N22 645 aa12.33□□□□□ -0.44
SLC28A1-201ENST00000286749 ENKD1Q9H0I2 346 aa12.33□□□□□ -0.44
SLC28A1-201ENST00000286749 OR52D1Q9H346 318 aa12.33□□□□□ -0.44
SLC28A1-201ENST00000286749 MBNL1Q9NR56 388 aaKnown RBP12.33□□□□□ -0.44
SLC28A1-201ENST00000286749 ZNF624Q9P2J8 865 aaPredicted RBP12.33□□□□□ -0.44
SLC28A1-201ENST00000286749 APOBEC3BQ9UH17 382 aaKnown RBP12.33□□□□□ -0.44
SLC28A1-201ENST00000286749 ACSL5Q9ULC5 683 aa12.33□□□□□ -0.44
SLC28A1-201ENST00000286749 ZNF780BQ9Y6R6 833 aa12.33□□□□□ -0.44
SLC28A1-201ENST00000286749 A0A1W2PQ72 361 aa12.33□□□□□ -0.44
SLC28A1-201ENST00000286749 E9PI62 339 aa12.33□□□□□ -0.44
SLC28A1-201ENST00000286749 NOS1APO75052 506 aaPredicted RBP12.33□□□□□ -0.44
SLC28A1-201ENST00000286749 REM1O75628 298 aa12.33□□□□□ -0.44
SLC28A1-201ENST00000286749 RBMS1P29558 406 aaKnown RBP12.33□□□□□ -0.44
SLC28A1-201ENST00000286749 PKLRP30613 574 aa12.33□□□□□ -0.44
SLC28A1-201ENST00000286749 PITPNBP48739 271 aa12.33□□□□□ -0.44
SLC28A1-201ENST00000286749 SRP9P49458 86 aaKnown RBP12.33□□□□□ -0.44
SLC28A1-201ENST00000286749 FXYD6P3P58550 94 aa12.33□□□□□ -0.44
SLC28A1-201ENST00000286749 KRT33BQ14525 404 aa12.33□□□□□ -0.44
SLC28A1-201ENST00000286749 KLHL12Q53G59 568 aa12.33□□□□□ -0.44
SLC28A1-201ENST00000286749 ZNF836Q6ZNA1 936 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms