RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 AVL9Q8NBF6 648 aa15.54■□□□□ 0.08
SH3RF1-201ENST00000284637 ZFAND1Q8TCF1 268 aa15.54■□□□□ 0.08
SH3RF1-201ENST00000284637 ATP13A2Q9NQ11 1180 aa15.54■□□□□ 0.08
SH3RF1-201ENST00000284637 MYH13Q9UKX3 1938 aa15.54■□□□□ 0.08
SH3RF1-201ENST00000284637 PRSS3P35030 304 aa15.53■□□□□ 0.08
SH3RF1-201ENST00000284637 CD79BP40259 229 aa15.53■□□□□ 0.08
SH3RF1-201ENST00000284637 ZNF542PQ5EBM4 170 aa15.53■□□□□ 0.08
SH3RF1-201ENST00000284637 CNTN4Q8IWV2 1026 aa15.53■□□□□ 0.08
SH3RF1-201ENST00000284637 OR4C15Q8NGM1 316 aa15.53■□□□□ 0.08
SH3RF1-201ENST00000284637 PCNPQ8WW12 178 aaKnown RBP15.53■□□□□ 0.08
SH3RF1-201ENST00000284637 PGAM5Q96HS1 289 aa15.53■□□□□ 0.08
SH3RF1-201ENST00000284637 WDR92Q96MX6 357 aa15.53■□□□□ 0.08
SH3RF1-201ENST00000284637 FAM83CQ9BQN1 747 aa15.53■□□□□ 0.08
SH3RF1-201ENST00000284637 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.53■□□□□ 0.08
SH3RF1-201ENST00000284637 UNKLQ9H9P5 680 aaKnown RBP15.53■□□□□ 0.08
SH3RF1-201ENST00000284637 MYADML2A6NDP7 307 aa15.53■□□□□ 0.08
SH3RF1-201ENST00000284637 ANTXRLA6NF34 631 aa15.53■□□□□ 0.08
SH3RF1-201ENST00000284637 KIAA0355O15063 1070 aa15.53■□□□□ 0.08
SH3RF1-201ENST00000284637 GJB3O75712 270 aa15.53■□□□□ 0.08
SH3RF1-201ENST00000284637 MC3RP41968 323 aa15.53■□□□□ 0.08
SH3RF1-201ENST00000284637 DLX5P56178 289 aa15.53■□□□□ 0.08
SH3RF1-201ENST00000284637 RAP2BP61225 183 aa15.53■□□□□ 0.08
SH3RF1-201ENST00000284637 RIN1Q13671 783 aa15.53■□□□□ 0.08
SH3RF1-201ENST00000284637 GKN2Q86XP6 184 aa15.53■□□□□ 0.08
SH3RF1-201ENST00000284637 C12orf76Q8N812 135 aaPredicted RBP15.53■□□□□ 0.08
SH3RF1-201ENST00000284637 MZB1Q8WU39 189 aa15.53■□□□□ 0.08
SH3RF1-201ENST00000284637 PBDC1Q9BVG4 233 aa15.53■□□□□ 0.08
SH3RF1-201ENST00000284637 AK1P00568 194 aa15.53■□□□□ 0.08
SH3RF1-201ENST00000284637 DHPSP49366 369 aaPredicted RBP15.53■□□□□ 0.08
SH3RF1-201ENST00000284637 ZNF140P52738 457 aaPredicted RBP15.53■□□□□ 0.08
SH3RF1-201ENST00000284637 HSD11B2P80365 405 aa15.53■□□□□ 0.08
SH3RF1-201ENST00000284637 HYAL4Q2M3T9 481 aa15.53■□□□□ 0.08
SH3RF1-201ENST00000284637 NT5C3BQ969T7 300 aa15.53■□□□□ 0.08
SH3RF1-201ENST00000284637 LURAP1Q96LR2 239 aa15.53■□□□□ 0.08
SH3RF1-201ENST00000284637 GSX2Q9BZM3 304 aa15.53■□□□□ 0.08
SH3RF1-201ENST00000284637 SLC25A18Q9H1K4 315 aa15.53■□□□□ 0.08
SH3RF1-201ENST00000284637 DDX31Q9H8H2 851 aaKnown RBP15.53■□□□□ 0.08
SH3RF1-201ENST00000284637 HSFX1Q9UBD0 423 aa15.53■□□□□ 0.08
SH3RF1-201ENST00000284637 DKKL1Q9UK85 242 aa15.53■□□□□ 0.08
SH3RF1-201ENST00000284637 WDPCPO95876 746 aa15.53■□□□□ 0.08
SH3RF1-201ENST00000284637 CYP17A1P05093 508 aa15.53■□□□□ 0.08
SH3RF1-201ENST00000284637 FAM69AQ5T7M9 428 aa15.53■□□□□ 0.08
SH3RF1-201ENST00000284637 MAVSQ7Z434 540 aa15.53■□□□□ 0.08
SH3RF1-201ENST00000284637 ARL14Q8N4G2 192 aa15.53■□□□□ 0.08
SH3RF1-201ENST00000284637 NTMT1Q9BV86 223 aa15.53■□□□□ 0.08
SH3RF1-201ENST00000284637 USP36Q9P275 1121 aaKnown RBP15.53■□□□□ 0.08
SH3RF1-201ENST00000284637 KLK3P07288 261 aaPredicted RBP15.52■□□□□ 0.08
SH3RF1-201ENST00000284637 POU3F4P49335 361 aa15.52■□□□□ 0.08
SH3RF1-201ENST00000284637 DUSP6Q16828 381 aa15.52■□□□□ 0.08
SH3RF1-201ENST00000284637 EOGTQ5NDL2 527 aa15.52■□□□□ 0.08
SH3RF1-201ENST00000284637 RNF111Q6ZNA4 994 aa15.52■□□□□ 0.08
SH3RF1-201ENST00000284637 CBLL1Q75N03 491 aa15.52■□□□□ 0.08
SH3RF1-201ENST00000284637 SLC46A3Q7Z3Q1 461 aa15.52■□□□□ 0.08
SH3RF1-201ENST00000284637 ZNF454Q8N9F8 522 aa15.52■□□□□ 0.08
SH3RF1-201ENST00000284637 FCRL1Q96LA6 429 aa15.52■□□□□ 0.08
SH3RF1-201ENST00000284637 SAP130Q9H0E3 1048 aa15.52■□□□□ 0.08
SH3RF1-201ENST00000284637 ERVMER34-1Q9H9K5 563 aa15.52■□□□□ 0.08
SH3RF1-201ENST00000284637 BRF2Q9HAW0 419 aa15.52■□□□□ 0.08
SH3RF1-201ENST00000284637 PRSS21Q9Y6M0 314 aa15.52■□□□□ 0.08
SH3RF1-201ENST00000284637 ARFGEF2Q9Y6D5 1785 aa15.52■□□□□ 0.08
SH3RF1-201ENST00000284637 TVP23AA6NH52 213 aa15.52■□□□□ 0.08
SH3RF1-201ENST00000284637 TOR1AO14656 332 aa15.52■□□□□ 0.08
SH3RF1-201ENST00000284637 UGDHO60701 494 aa15.52■□□□□ 0.08
SH3RF1-201ENST00000284637 CASRP41180 1078 aa15.52■□□□□ 0.08
SH3RF1-201ENST00000284637 ADARB1P78563 741 aaKnown RBP15.52■□□□□ 0.08
SH3RF1-201ENST00000284637 MBTPS1Q14703 1052 aa15.52■□□□□ 0.08
SH3RF1-201ENST00000284637 MFSD13AQ14CX5 517 aa15.52■□□□□ 0.08
SH3RF1-201ENST00000284637 SSX9Q7RTT3 188 aa15.52■□□□□ 0.08
SH3RF1-201ENST00000284637 FIBINQ8TAL6 211 aa15.52■□□□□ 0.08
SH3RF1-201ENST00000284637 FYTTD1Q96QD9 318 aaKnown RBP15.52■□□□□ 0.08
SH3RF1-201ENST00000284637 CLMPQ9H6B4 373 aa15.52■□□□□ 0.08
SH3RF1-201ENST00000284637 OR6C65A6NJZ3 312 aa15.52■□□□□ 0.08
SH3RF1-201ENST00000284637 POM121CA8CG34 1229 aa15.52■□□□□ 0.08
SH3RF1-201ENST00000284637 E2F3O00716 465 aa15.52■□□□□ 0.08
SH3RF1-201ENST00000284637 RNGTTO60942 597 aaKnown RBP15.52■□□□□ 0.08
SH3RF1-201ENST00000284637 HMGN2P05204 90 aaKnown RBP15.52■□□□□ 0.08
SH3RF1-201ENST00000284637 HEXBP07686 556 aa15.52■□□□□ 0.08
SH3RF1-201ENST00000284637 OR9A2Q8NGT5 310 aa15.52■□□□□ 0.08
SH3RF1-201ENST00000284637 RPS10P5Q9NQ39 176 aa15.52■□□□□ 0.08
SH3RF1-201ENST00000284637 DMRT3Q9NQL9 472 aa15.52■□□□□ 0.08
SH3RF1-201ENST00000284637 GFOD1Q9NXC2 390 aa15.52■□□□□ 0.08
SH3RF1-201ENST00000284637 FAM183AA6NL82 134 aa15.52■□□□□ 0.07
SH3RF1-201ENST00000284637 ACPPP15309 386 aa15.52■□□□□ 0.07
SH3RF1-201ENST00000284637 MECP2P51608 486 aaKnown RBP15.52■□□□□ 0.07
SH3RF1-201ENST00000284637 GAS2L1Q99501 681 aaPredicted RBP15.52■□□□□ 0.07
SH3RF1-201ENST00000284637 A0A1B0GTW7 788 aa15.52■□□□□ 0.07
SH3RF1-201ENST00000284637 J3KTA2 159 aa15.52■□□□□ 0.07
SH3RF1-201ENST00000284637 M0QZQ0 153 aa15.52■□□□□ 0.07
SH3RF1-201ENST00000284637 GIFP27352 417 aa15.52■□□□□ 0.07
SH3RF1-201ENST00000284637 DHCR24Q15392 516 aa15.52■□□□□ 0.07
SH3RF1-201ENST00000284637 GDPD3Q7L5L3 318 aa15.52■□□□□ 0.07
SH3RF1-201ENST00000284637 P4HA3Q7Z4N8 544 aa15.52■□□□□ 0.07
SH3RF1-201ENST00000284637 ST8SIA4Q92187 359 aa15.52■□□□□ 0.07
SH3RF1-201ENST00000284637 TSACCQ96A04 125 aaPredicted RBP15.52■□□□□ 0.07
SH3RF1-201ENST00000284637 PEX11GQ96HA9 241 aa15.52■□□□□ 0.07
SH3RF1-201ENST00000284637 C11orf54Q9H0W9 315 aaPredicted RBP15.52■□□□□ 0.07
SH3RF1-201ENST00000284637 DNAJC5Q9H3Z4 198 aa15.52■□□□□ 0.07
SH3RF1-201ENST00000284637 RASD1Q9Y272 281 aa15.52■□□□□ 0.07
SH3RF1-201ENST00000284637 DCDC2BA2VCK2 349 aa15.51■□□□□ 0.07
SH3RF1-201ENST00000284637 MEIS3P1A6NDR6 274 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms