RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 DCAF4L2Q8NA75 395 aa8.28□□□□□ -1.08
NIPBL-201ENST00000282516 GPR148Q8TDV2 347 aa8.28□□□□□ -1.08
NIPBL-201ENST00000282516 INTS12Q96CB8 462 aaKnown RBP8.28□□□□□ -1.08
NIPBL-201ENST00000282516 ZNF416Q9BWM5 594 aa8.28□□□□□ -1.08
NIPBL-201ENST00000282516 MCTS1Q9ULC4 181 aaKnown RBP8.28□□□□□ -1.08
NIPBL-201ENST00000282516 PARP4Q9UKK3 1724 aaKnown RBP8.28□□□□□ -1.08
NIPBL-201ENST00000282516 FUOMA2VDF0 154 aa8.28□□□□□ -1.08
NIPBL-201ENST00000282516 ZNF891A8MT65 544 aaPredicted RBP8.28□□□□□ -1.08
NIPBL-201ENST00000282516 DVL1O14640 695 aa8.28□□□□□ -1.08
NIPBL-201ENST00000282516 DVL1P1P54792 670 aaPredicted RBP8.28□□□□□ -1.08
NIPBL-201ENST00000282516 WDR4P57081 412 aaKnown RBP8.28□□□□□ -1.08
NIPBL-201ENST00000282516 TAS2R19P59542 299 aa8.28□□□□□ -1.08
NIPBL-201ENST00000282516 TBPL1P62380 186 aa8.28□□□□□ -1.08
NIPBL-201ENST00000282516 MRPS34P82930 218 aaKnown RBP8.28□□□□□ -1.08
NIPBL-201ENST00000282516 DEFB134Q4QY38 66 aa8.28□□□□□ -1.08
NIPBL-201ENST00000282516 NCBP2-AS2Q69YL0 99 aa8.28□□□□□ -1.08
NIPBL-201ENST00000282516 METAP1DQ6UB28 335 aaPredicted RBP8.28□□□□□ -1.08
NIPBL-201ENST00000282516 RBMXL3Q8N7X1 1067 aaKnown RBP8.28□□□□□ -1.08
NIPBL-201ENST00000282516 IL17RDQ8NFM7 739 aa8.28□□□□□ -1.08
NIPBL-201ENST00000282516 THAP3Q8WTV1 239 aaPredicted RBP8.28□□□□□ -1.08
NIPBL-201ENST00000282516 NT5C3BQ969T7 300 aa8.28□□□□□ -1.08
NIPBL-201ENST00000282516 RAB7BQ96AH8 199 aa8.28□□□□□ -1.08
NIPBL-201ENST00000282516 SENP5Q96HI0 755 aaPredicted RBP8.28□□□□□ -1.08
NIPBL-201ENST00000282516 PRRC1Q96M27 445 aa8.28□□□□□ -1.08
NIPBL-201ENST00000282516 GABARAPH6UMI1 98 aa8.28□□□□□ -1.08
NIPBL-201ENST00000282516 CHEK1O14757 476 aa8.28□□□□□ -1.08
NIPBL-201ENST00000282516 GABARAPO95166 117 aa8.28□□□□□ -1.08
NIPBL-201ENST00000282516 EPOP01588 193 aa8.28□□□□□ -1.08
NIPBL-201ENST00000282516 NSDHLQ15738 373 aa8.28□□□□□ -1.08
NIPBL-201ENST00000282516 PLCXD3Q63HM9 321 aa8.28□□□□□ -1.08
NIPBL-201ENST00000282516 STEAP2Q8NFT2 490 aa8.28□□□□□ -1.08
NIPBL-201ENST00000282516 AMDHD1Q96NU7 426 aa8.28□□□□□ -1.08
NIPBL-201ENST00000282516 NIPSNAP3BQ9BS92 247 aa8.28□□□□□ -1.08
NIPBL-201ENST00000282516 HCAR1Q9BXC0 346 aa8.28□□□□□ -1.08
NIPBL-201ENST00000282516 A0A0D9SG52 128 aa8.27□□□□□ -1.08
NIPBL-201ENST00000282516 ONECUT3O60422 494 aaPredicted RBP8.27□□□□□ -1.08
NIPBL-201ENST00000282516 MPIG6BO95866 241 aa8.27□□□□□ -1.08
NIPBL-201ENST00000282516 HLCSP50747 726 aa8.27□□□□□ -1.08
NIPBL-201ENST00000282516 TAS2R38P59533 333 aa8.27□□□□□ -1.08
NIPBL-201ENST00000282516 RAB11AP62491 216 aa8.27□□□□□ -1.08
NIPBL-201ENST00000282516 SF3A2Q15428 464 aaKnown RBP8.27□□□□□ -1.08
NIPBL-201ENST00000282516 ECM1Q16610 540 aa8.27□□□□□ -1.08
NIPBL-201ENST00000282516 TAS2R16Q9NYV7 291 aa8.27□□□□□ -1.08
NIPBL-201ENST00000282516 PTTG3PQ9NZH4 202 aa8.27□□□□□ -1.08
NIPBL-201ENST00000282516 SEC14L5O43304 696 aa8.27□□□□□ -1.08
NIPBL-201ENST00000282516 ACRV1P26436 265 aa8.27□□□□□ -1.08
NIPBL-201ENST00000282516 OGDHQ02218 1023 aa8.27□□□□□ -1.08
NIPBL-201ENST00000282516 PCK2Q16822 640 aa8.27□□□□□ -1.08
NIPBL-201ENST00000282516 PLBD1Q6P4A8 553 aa8.27□□□□□ -1.08
NIPBL-201ENST00000282516 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.27□□□□□ -1.08
NIPBL-201ENST00000282516 OR4N2Q8NGD1 307 aa8.27□□□□□ -1.08
NIPBL-201ENST00000282516 OR2T27Q8NH04 317 aa8.27□□□□□ -1.08
NIPBL-201ENST00000282516 MYADMQ96S97 322 aa8.27□□□□□ -1.08
NIPBL-201ENST00000282516 NKX3-1Q99801 234 aaPredicted RBP8.27□□□□□ -1.08
NIPBL-201ENST00000282516 PSD2Q9BQI7 771 aa8.27□□□□□ -1.08
NIPBL-201ENST00000282516 GINS3Q9BRX5 216 aa8.27□□□□□ -1.08
NIPBL-201ENST00000282516 FBRSL1Q9HCM7 1045 aaKnown RBP8.27□□□□□ -1.08
NIPBL-201ENST00000282516 INPP5EQ9NRR6 644 aa8.27□□□□□ -1.08
NIPBL-201ENST00000282516 GALPQ9UBC7 116 aa8.27□□□□□ -1.08
NIPBL-201ENST00000282516 STEAP1Q9UHE8 339 aa8.27□□□□□ -1.08
NIPBL-201ENST00000282516 RARRES3Q9UL19 164 aa8.27□□□□□ -1.08
NIPBL-201ENST00000282516 SPTBN1Q01082 2364 aaKnown RBP8.27□□□□□ -1.09
NIPBL-201ENST00000282516 TMEM88BA6NKF7 163 aa8.27□□□□□ -1.09
NIPBL-201ENST00000282516 CLIC3O95833 236 aa8.27□□□□□ -1.09
NIPBL-201ENST00000282516 PIGRP01833 764 aa8.27□□□□□ -1.09
NIPBL-201ENST00000282516 HTR1EP28566 365 aa8.27□□□□□ -1.09
NIPBL-201ENST00000282516 GDF5P43026 501 aa8.27□□□□□ -1.09
NIPBL-201ENST00000282516 GRB7Q14451 532 aa8.27□□□□□ -1.09
NIPBL-201ENST00000282516 CDONQ4KMG0 1287 aa8.27□□□□□ -1.09
NIPBL-201ENST00000282516 SLC22A6Q4U2R8 563 aa8.27□□□□□ -1.09
NIPBL-201ENST00000282516 ZNF805Q5CZA5 627 aa8.27□□□□□ -1.09
NIPBL-201ENST00000282516 BPHLQ86WA6 291 aaPredicted RBP8.27□□□□□ -1.09
NIPBL-201ENST00000282516 HRASLSQ9HDD0 168 aa8.27□□□□□ -1.09
NIPBL-201ENST00000282516 TMEM248Q9NWD8 314 aa8.27□□□□□ -1.09
NIPBL-201ENST00000282516 B4DXG7 233 aa8.27□□□□□ -1.09
NIPBL-201ENST00000282516 GAPDHSO14556 408 aaPredicted RBP8.27□□□□□ -1.09
NIPBL-201ENST00000282516 B4GAT1O43505 415 aa8.27□□□□□ -1.09
NIPBL-201ENST00000282516 KDELR3O43731 214 aa8.27□□□□□ -1.09
NIPBL-201ENST00000282516 IL3RAP26951 378 aa8.27□□□□□ -1.09
NIPBL-201ENST00000282516 EFNA3P52797 238 aa8.27□□□□□ -1.09
NIPBL-201ENST00000282516 GALNT2Q10471 571 aa8.27□□□□□ -1.09
NIPBL-201ENST00000282516 TMEM201Q5SNT2 666 aa8.27□□□□□ -1.09
NIPBL-201ENST00000282516 ATPAF1Q5TC12 328 aaPredicted RBP8.27□□□□□ -1.09
NIPBL-201ENST00000282516 NAT8LQ8N9F0 302 aa8.27□□□□□ -1.09
NIPBL-201ENST00000282516 OR4M1Q8NGD0 313 aa8.27□□□□□ -1.09
NIPBL-201ENST00000282516 HERPUD2Q9BSE4 406 aa8.27□□□□□ -1.09
NIPBL-201ENST00000282516 SLIT3O75094 1523 aa8.27□□□□□ -1.09
NIPBL-201ENST00000282516 FAM155AB1AL88 458 aaPredicted RBP8.27□□□□□ -1.09
NIPBL-201ENST00000282516 MSTNO14793 375 aa8.27□□□□□ -1.09
NIPBL-201ENST00000282516 DENRO43583 198 aaKnown RBP8.27□□□□□ -1.09
NIPBL-201ENST00000282516 USP2O75604 605 aaPredicted RBP8.27□□□□□ -1.09
NIPBL-201ENST00000282516 RFC2P35250 354 aa8.27□□□□□ -1.09
NIPBL-201ENST00000282516 WNT4P56705 351 aa8.27□□□□□ -1.09
NIPBL-201ENST00000282516 SLC14A1Q13336 389 aa8.27□□□□□ -1.09
NIPBL-201ENST00000282516 ZNF74Q16587 644 aa8.27□□□□□ -1.09
NIPBL-201ENST00000282516 MS4A13Q5J8X5 152 aa8.27□□□□□ -1.09
NIPBL-201ENST00000282516 RFPL4BQ6ZWI9 263 aa8.27□□□□□ -1.09
NIPBL-201ENST00000282516 SERINC5Q86VE9 423 aa8.27□□□□□ -1.09
NIPBL-201ENST00000282516 LACC1Q8IV20 430 aa8.27□□□□□ -1.09
NIPBL-201ENST00000282516 OR5D16Q8NGK9 328 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms