RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 HINT3Q9NQE9 182 aaKnown RBP4.44□□□□□ -1.7
USP44-201ENST00000258499 REV1Q9UBZ9 1251 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 LIPT1Q9Y234 373 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 AK6Q9Y3D8 172 aaKnown RBP4.44□□□□□ -1.7
USP44-201ENST00000258499 V9GYH0 126 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 TEX13CA0A0J9YWL9 993 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 C17orf113A0A1B0GUU1 675 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 LRIT2A6NDA9 550 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 FABP7O15540 132 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 CLEC3AO75596 197 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 PPP1R3DO95685 299 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 LGI1O95970 557 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 ZNF888P0CJ79 500 aaPredicted RBP4.44□□□□□ -1.7
USP44-201ENST00000258499 ATP5A1P25705 553 aaKnown RBP4.44□□□□□ -1.7
USP44-201ENST00000258499 SNTB2Q13425 540 aaKnown RBP4.44□□□□□ -1.7
USP44-201ENST00000258499 ASAH1Q13510 395 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 CCDC58Q4VC31 144 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 EIPR1Q53HC9 387 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 ZNF761Q86XN6 746 aaPredicted RBP4.44□□□□□ -1.7
USP44-201ENST00000258499 CCDC28AQ8IWP9 274 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 LRRC25Q8N386 305 aaPredicted RBP4.44□□□□□ -1.7
USP44-201ENST00000258499 MRPL43Q8N983 215 aaKnown RBP4.44□□□□□ -1.7
USP44-201ENST00000258499 OR2L5Q8NG80 312 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 OR13C2Q8NGS9 318 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 CNRIP1Q96F85 164 aaPredicted RBP4.44□□□□□ -1.7
USP44-201ENST00000258499 C4orf36Q96KX1 117 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 FCRL1Q96LA6 429 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 FUZQ9BT04 418 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 ACTRT3Q9BYD9 372 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 OR52A5Q9H2C5 316 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 SLA2Q9H6Q3 261 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 MBNL1Q9NR56 388 aaKnown RBP4.44□□□□□ -1.7
USP44-201ENST00000258499 BABAM2Q9NXR7 383 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 PPIEQ9UNP9 301 aaKnown RBP4.44□□□□□ -1.7
USP44-201ENST00000258499 GPR55Q9Y2T6 319 aaPredicted RBP4.44□□□□□ -1.7
USP44-201ENST00000258499 SPTBP11277 2137 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 DOCK6Q96HP0 2047 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 CARNS1A5YM72 827 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 GTPBP1O00178 669 aaKnown RBP4.43□□□□□ -1.7
USP44-201ENST00000258499 CASC3O15234 703 aaKnown RBP4.43□□□□□ -1.7
USP44-201ENST00000258499 FLRT2O43155 660 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 SLC19A2O60779 497 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 KAT7O95251 611 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 APODP05090 189 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 SNRPBP14678 240 aaKnown RBP4.43□□□□□ -1.7
USP44-201ENST00000258499 CPEP16870 476 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 ELK1P19419 428 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 STAT5AP42229 794 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 GBX2P52951 348 aaPredicted RBP4.43□□□□□ -1.7
USP44-201ENST00000258499 OR10A3P58181 314 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 TEKQ02763 1124 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 CRYZQ08257 329 aaKnown RBP4.43□□□□□ -1.7
USP44-201ENST00000258499 SF3A2Q15428 464 aaKnown RBP4.43□□□□□ -1.7
USP44-201ENST00000258499 FCN2Q15485 313 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 CST6Q15828 149 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 PUS10Q3MIT2 529 aaKnown RBP4.43□□□□□ -1.7
USP44-201ENST00000258499 TMEM35AQ53FP2 167 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 C12orf73Q69YU5 71 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 SLC25A25Q6KCM7 469 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 FAM111BQ6SJ93 734 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 ESPNLQ6ZVH7 1005 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 CHMP1BQ7LBR1 199 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 GID4Q8IVV7 300 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 OR52E2Q8NGJ4 325 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 OR5W2Q8NH69 310 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 RNF31Q96EP0 1072 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 MSANTD3Q96H12 275 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 RBM18Q96H35 190 aaKnown RBP4.43□□□□□ -1.7
USP44-201ENST00000258499 MRGPRX3Q96LB0 322 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 COQ10AQ96MF6 247 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 C19orf43Q9BQ61 176 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 RAB11FIP5Q9BXF6 653 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 SLITRK2Q9H156 845 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 ISG20L2Q9H9L3 353 aaKnown RBP4.43□□□□□ -1.7
USP44-201ENST00000258499 SLC28A3Q9HAS3 691 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 SPHK1Q9NYA1 384 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 WSB2Q9NYS7 404 aaPredicted RBP4.43□□□□□ -1.7
USP44-201ENST00000258499 NPAP1Q9NZP6 1156 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 CA5BQ9Y2D0 317 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 MAU2Q9Y6X3 613 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 A0A0B4J203 849 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 A8MVJ9 347 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 CHURC1-FNTBB4DL54 471 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 NPIPB8E9PQR5 432 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 BLOC1S5-TXNDC5H3BN57 136 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 TSPAN4O14817 238 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 ANXA3P12429 323 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 TYRP1P17643 537 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 HK1P19367 917 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 RAB3BP20337 219 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 DNASE1P24855 282 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 GDI1P31150 447 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 PSMB10P40306 273 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 PITPNBP48739 271 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 AP2S1P53680 142 aaPredicted RBP4.43□□□□□ -1.7
USP44-201ENST00000258499 RRAS2P62070 204 aaPredicted RBP4.43□□□□□ -1.7
USP44-201ENST00000258499 REEP5Q00765 189 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 EEF1A2Q05639 463 aaKnown RBP4.43□□□□□ -1.7
USP44-201ENST00000258499 LGALS3BPQ08380 585 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 ARHGAP19Q14CB8 494 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms