RNA–Protein interactions for RNA: ENST00000253193.8

LRP3-201, Transcript of LDL receptor related protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP3, Length 3,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-201ENST00000253193 C10orf53Q8N6V4 93 aa17.23■□□□□ 0.35
LRP3-201ENST00000253193 YIPF7Q8N8F6 280 aa17.23■□□□□ 0.35
LRP3-201ENST00000253193 OR2L8Q8NGY9 312 aa17.23■□□□□ 0.35
LRP3-201ENST00000253193 OR4Q3Q8NH05 313 aa17.23■□□□□ 0.35
LRP3-201ENST00000253193 RNF170Q96K19 258 aa17.23■□□□□ 0.35
LRP3-201ENST00000253193 ALG8Q9BVK2 526 aa17.23■□□□□ 0.35
LRP3-201ENST00000253193 HDAC8Q9BY41 377 aa17.23■□□□□ 0.35
LRP3-201ENST00000253193 RBCK1Q9BYM8 510 aa17.23■□□□□ 0.35
LRP3-201ENST00000253193 OR52D1Q9H346 318 aa17.23■□□□□ 0.35
LRP3-201ENST00000253193 MTHFD2LQ9H903 347 aaPredicted RBP17.23■□□□□ 0.35
LRP3-201ENST00000253193 BCL2L10Q9HD36 194 aa17.23■□□□□ 0.35
LRP3-201ENST00000253193 HINT3Q9NQE9 182 aaKnown RBP17.23■□□□□ 0.35
LRP3-201ENST00000253193 USP36Q9P275 1121 aaKnown RBP17.23■□□□□ 0.35
LRP3-201ENST00000253193 ASB4Q9Y574 426 aa17.23■□□□□ 0.35
LRP3-201ENST00000253193 CACNA1CQ13936 2221 aa17.23■□□□□ 0.35
LRP3-201ENST00000253193 RIIAD1A6NNX1 92 aa17.23■□□□□ 0.35
LRP3-201ENST00000253193 OR10H2O60403 315 aa17.23■□□□□ 0.35
LRP3-201ENST00000253193 RPE65Q16518 533 aa17.23■□□□□ 0.35
LRP3-201ENST00000253193 KIAA1324Q6UXG2 1013 aaKnown RBP17.23■□□□□ 0.35
LRP3-201ENST00000253193 CEACAM19Q7Z692 300 aa17.23■□□□□ 0.35
LRP3-201ENST00000253193 RIPOR3Q96MK2 946 aa17.23■□□□□ 0.35
LRP3-201ENST00000253193 ISG20L2Q9H9L3 353 aaKnown RBP17.23■□□□□ 0.35
LRP3-201ENST00000253193 UNC119BA6NIH7 251 aa17.22■□□□□ 0.35
LRP3-201ENST00000253193 GRXCR1A8MXD5 290 aa17.22■□□□□ 0.35
LRP3-201ENST00000253193 TNFRSF10AO00220 468 aa17.22■□□□□ 0.35
LRP3-201ENST00000253193 EEF1E1O43324 174 aaKnown RBP17.22■□□□□ 0.35
LRP3-201ENST00000253193 PYCR1P32322 319 aa17.22■□□□□ 0.35
LRP3-201ENST00000253193 RPL4P36578 427 aaKnown RBP17.22■□□□□ 0.35
LRP3-201ENST00000253193 RPS21P63220 83 aaKnown RBP17.22■□□□□ 0.35
LRP3-201ENST00000253193 TPBGQ13641 420 aa17.22■□□□□ 0.35
LRP3-201ENST00000253193 ZNF658BQ4V348 819 aaPredicted RBP17.22■□□□□ 0.35
LRP3-201ENST00000253193 FAM111BQ6SJ93 734 aa17.22■□□□□ 0.35
LRP3-201ENST00000253193 SIMC1Q8NDZ2 872 aa17.22■□□□□ 0.35
LRP3-201ENST00000253193 ZNF707Q96C28 371 aaPredicted RBP17.22■□□□□ 0.35
LRP3-201ENST00000253193 ASB16Q96NS5 453 aa17.22■□□□□ 0.35
LRP3-201ENST00000253193 ARHGAP9Q9BRR9 750 aa17.22■□□□□ 0.35
LRP3-201ENST00000253193 PITHD1Q9GZP4 211 aaPredicted RBP17.22■□□□□ 0.35
LRP3-201ENST00000253193 ENAMQ9NRM1 1142 aa17.22■□□□□ 0.35
LRP3-201ENST00000253193 STMN3Q9NZ72 180 aa17.22■□□□□ 0.35
LRP3-201ENST00000253193 DRD3P35462 400 aa17.22■□□□□ 0.35
LRP3-201ENST00000253193 ABATP80404 500 aa17.22■□□□□ 0.35
LRP3-201ENST00000253193 GPM6BQ13491 265 aa17.22■□□□□ 0.35
LRP3-201ENST00000253193 SUZ12Q15022 739 aaKnown RBP17.22■□□□□ 0.35
LRP3-201ENST00000253193 QSOX2Q6ZRP7 698 aa17.22■□□□□ 0.35
LRP3-201ENST00000253193 OR7G2Q8NG99 324 aa17.22■□□□□ 0.35
LRP3-201ENST00000253193 BEX1Q9HBH7 125 aa17.22■□□□□ 0.35
LRP3-201ENST00000253193 TRIM36Q9NQ86 728 aa17.22■□□□□ 0.35
LRP3-201ENST00000253193 TESQ9UGI8 421 aaKnown RBP17.22■□□□□ 0.35
LRP3-201ENST00000253193 XIRP2A4UGR9 3374 aa17.22■□□□□ 0.35
LRP3-201ENST00000253193 A0A1W2PRG6 482 aa17.22■□□□□ 0.35
LRP3-201ENST00000253193 C4orf51C9J302 202 aa17.22■□□□□ 0.35
LRP3-201ENST00000253193 RNGTTO60942 597 aaKnown RBP17.22■□□□□ 0.35
LRP3-201ENST00000253193 FUT5Q11128 374 aa17.22■□□□□ 0.35
LRP3-201ENST00000253193 ASAH1Q13510 395 aa17.22■□□□□ 0.35
LRP3-201ENST00000253193 TMEM44Q2T9K0 475 aa17.22■□□□□ 0.35
LRP3-201ENST00000253193 TRIM63Q969Q1 353 aa17.22■□□□□ 0.35
LRP3-201ENST00000253193 ABCG5Q9H222 651 aa17.22■□□□□ 0.35
LRP3-201ENST00000253193 TMEM27Q9HBJ8 222 aa17.22■□□□□ 0.35
LRP3-201ENST00000253193 NPAP1Q9NZP6 1156 aa17.22■□□□□ 0.35
LRP3-201ENST00000253193 ACAD8Q9UKU7 415 aa17.22■□□□□ 0.35
LRP3-201ENST00000253193 ZNF443Q9Y2A4 671 aaPredicted RBP17.22■□□□□ 0.35
LRP3-201ENST00000253193 HTR2BP41595 481 aa17.21■□□□□ 0.35
LRP3-201ENST00000253193 ZNF155Q12901 538 aaPredicted RBP17.21■□□□□ 0.35
LRP3-201ENST00000253193 MTFR2Q6P444 385 aa17.21■□□□□ 0.35
LRP3-201ENST00000253193 SFXN5Q8TD22 340 aa17.21■□□□□ 0.35
LRP3-201ENST00000253193 UBQLN3Q9H347 655 aa17.21■□□□□ 0.35
LRP3-201ENST00000253193 MCUBQ9NWR8 336 aa17.21■□□□□ 0.35
LRP3-201ENST00000253193 RPS6KB2Q9UBS0 482 aa17.21■□□□□ 0.35
LRP3-201ENST00000253193 ALG5Q9Y673 324 aa17.21■□□□□ 0.35
LRP3-201ENST00000253193 TRAV27A0A087WT01 109 aa17.21■□□□□ 0.35
LRP3-201ENST00000253193 A0A0G2JMP0 313 aa17.21■□□□□ 0.35
LRP3-201ENST00000253193 MEN1O00255 615 aa17.21■□□□□ 0.35
LRP3-201ENST00000253193 NARSO43776 548 aaKnown RBP17.21■□□□□ 0.35
LRP3-201ENST00000253193 ZNF10P21506 573 aaPredicted RBP17.21■□□□□ 0.35
LRP3-201ENST00000253193 PKLRP30613 574 aa17.21■□□□□ 0.35
LRP3-201ENST00000253193 GABRA3P34903 492 aa17.21■□□□□ 0.35
LRP3-201ENST00000253193 TRMT12Q53H54 448 aaKnown RBP17.21■□□□□ 0.35
LRP3-201ENST00000253193 FAM27D1Q5T7N8 215 aa17.21■□□□□ 0.35
LRP3-201ENST00000253193 RFPL4BQ6ZWI9 263 aa17.21■□□□□ 0.35
LRP3-201ENST00000253193 SIX5Q8N196 739 aa17.21■□□□□ 0.35
LRP3-201ENST00000253193 DCLRE1CQ96SD1 692 aaKnown RBP17.21■□□□□ 0.35
LRP3-201ENST00000253193 NDC1Q9BTX1 674 aa17.21■□□□□ 0.35
LRP3-201ENST00000253193 NT5DC2Q9H857 520 aa17.21■□□□□ 0.35
LRP3-201ENST00000253193 CDH10Q9Y6N8 788 aa17.21■□□□□ 0.35
LRP3-201ENST00000253193 ALPK3Q96L96 1907 aa17.21■□□□□ 0.35
LRP3-201ENST00000253193 A0A0X1KG70 313 aa17.21■□□□□ 0.35
LRP3-201ENST00000253193 URADA6NGE7 173 aa17.21■□□□□ 0.35
LRP3-201ENST00000253193 CENPBD1B2RD01 187 aa17.21■□□□□ 0.35
LRP3-201ENST00000253193 PROM1O43490 865 aa17.21■□□□□ 0.35
LRP3-201ENST00000253193 TBX19O60806 448 aa17.21■□□□□ 0.35
LRP3-201ENST00000253193 ALX3O95076 343 aa17.21■□□□□ 0.35
LRP3-201ENST00000253193 TP53P04637 393 aaPredicted RBP17.21■□□□□ 0.35
LRP3-201ENST00000253193 SHC1P29353 583 aa17.21■□□□□ 0.35
LRP3-201ENST00000253193 BMP8BP34820 402 aa17.21■□□□□ 0.35
LRP3-201ENST00000253193 ERVK-21P61565 698 aa17.21■□□□□ 0.35
LRP3-201ENST00000253193 AGERQ15109 404 aa17.21■□□□□ 0.35
LRP3-201ENST00000253193 BTBD16Q32M84 506 aa17.21■□□□□ 0.35
LRP3-201ENST00000253193 FLYWCH1Q4VC44 716 aa17.21■□□□□ 0.35
LRP3-201ENST00000253193 PRRT3Q5FWE3 981 aa17.21■□□□□ 0.35
LRP3-201ENST00000253193 AGBL4Q5VU57 503 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms